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import codecs
from http import HTTPStatus
import json
import os
import pickle
from flask import Blueprint, Response, jsonify, make_response, render_template, request, send_file
from app_utils import save_data_file, save_model_file
from common.data_register import get_experiment, get_experiments, lookup_dataframe, register_experiment
from common.model_register import get_model, register_model
from models.regression import build_evaluation, build_predictions_plot, evaluate, get_model_artefact, predict, get_serialised_model_artefact, split_data, train
from models.regression_types import RegressionExperiment, RegressionArgs, SelectedModelArgs
from models.model_specific_args.arg_register import _model_to_args_map # tmp??
from models.model_specific_args.arg_types import length_scale, length_scale_bounds, nu
from literals import _version
regression_blueprint = Blueprint('regression', __name__)
###############################################################################
# U I R o u t e s #
###############################################################################
@regression_blueprint.route("/regression", methods=['GET'])
@regression_blueprint.route("/regression/train", methods=['GET'])
def launch_training_ui() -> str:
ref = request.args.get('session_ref', default='')
if ref:
data = lookup_dataframe(ref)
heads = data.columns.to_list()
args = RegressionArgs(session_ref=ref)
return render_template('regression.html',
args=args,
headers=heads,
model_specific_args=_model_to_args_map,
version=_version)
return render_template('regression.html',
args=RegressionArgs(),
model_specific_args=_model_to_args_map,
version=_version)
@regression_blueprint.route("/regression/evaluate", methods=['GET'])
def launch_training_evaluation_ui() -> str:
selected_exp = request.args.get('selected_experiment_id', default=None,
type=lambda v: int(v) if v and v != 'None' else None)
args = RegressionArgs(
# get query params
session_ref = request.args.get('session_ref', default=''),
result_column = request.args.get('result_column', default=''),
model_name = request.args.get('regression_model', default=''),
training_split = request.args.get('trn_split', default=0.8,
type=lambda v: float(v)),
random_seed = request.args.get('trn_split_random_seed', default=None,
type=lambda v: int(v) if v else None),
standardise = request.args.get('check_standardise', default=False,
type=lambda v: v.lower() == 'on'),
normalise = request.args.get('check_normalise', default=False,
type=lambda v: v.lower() == 'on'),
null_replacement=request.args.get('null_replacement', default=''),
fill_value=request.args.get('fill_value', default=None,
type=lambda v: float(v) if v else None)
)
# get model specific options
kernel = request.args.get('kernel', default='')
kernel_options = {}
if args.model_name == 'GaussianProcessRegressor':
kernel = kernel.lower()
if kernel == 'rbf' or kernel == 'matern':
len_sc = request.args.get(f"{kernel}_{length_scale.dom_name}",
default=length_scale.default_value, type=lambda v: float(v))
bounds_low = request.args.get(f"{kernel}_{length_scale_bounds.dom_name}_low",
default=length_scale_bounds.default_value[0], type=lambda v: float(v))
bounds_high = request.args.get(f"{kernel}_{length_scale_bounds.dom_name}_high",
default=length_scale_bounds.default_value[1], type=lambda v: float(v))
kernel_options = {
f"{kernel}_length_scale": len_sc,
f"{kernel}_length_scale_bounds": (bounds_low, bounds_high)
}
if kernel == 'matern':
kernel_options[f'{kernel}_nu_(smoothness)'] = request.args.get(f"{nu.dom_name}",
default=nu.default_value, type=lambda v: float(v))
model_args: SelectedModelArgs = {"kernel": kernel}
if kernel_options:
model_args["kernel_options"] = kernel_options
args.model_args = model_args
data = lookup_dataframe(args.session_ref)
prev_experiments = get_experiments(args.session_ref)
# overwrite args read from form if we have a selected experiment
if (selected_exp or selected_exp == 0) and prev_experiments:
print(f"selected experiment: {selected_exp}")
exp = prev_experiments[selected_exp]
args = exp.args
evaluation = exp.eval
model_ref = exp.model_ref
else:
exp_id = len(prev_experiments)
model = train(data=data, args=args)
evaluation = evaluate(data, model, args, exp_id)
matched_experiment = args.find_same_modelling_args(prev_experiments)
model_ref = matched_experiment.model_ref if matched_experiment else register_model(model)
exp = RegressionExperiment(args=args, eval=evaluation, model_ref=model_ref, id=exp_id)
if not matched_experiment:
register_experiment(ref=args.session_ref, experiment=exp)
return render_template('regression.html',
args=args,
model_specific_args=_model_to_args_map,
model_ref=model_ref,
evaluation=evaluation,
prev_experiments=prev_experiments,
selected_experiment_id=selected_exp,
version=_version)
# using POST here is an alternative to the 2 step option:
# 1. POST /api/add_session_data (data + model files) -> ref
# 2. GET /api/regression/apply?session_ref={ref}
@regression_blueprint.route("/regression/retrain", methods=['GET', 'POST'])
def relaunch_training_ui() -> str:
exp_id = 0 # pre experiments not serialised, so we always start again from 0
if request.method == 'GET':
session_ref = request.args.get('session_ref', default='')
exp = get_experiment(ref=session_ref, idx=exp_id) # experiment should have been added to cache when sent via /api/add_session_data
else:
session_ref, _ = save_data_file(file_field_name='data')
exp = save_model_file(ref=session_ref, file_field_name='model')
# not rebuilt when deserialised as not needed if just using for predictions
exp.eval.act_vs_pred_plot_relative_path = build_predictions_plot(
session_ref=session_ref,
trained_model_pipeline=get_model(exp.model_ref),
args=exp.args,
exp_id=exp_id)
return render_template('regression.html',
args=exp.args,
model_specific_args=_model_to_args_map,
model_ref=exp.model_ref,
evaluation=exp.eval,
prev_experiments=[],
selected_experiment_id=exp_id,
version=_version)
@regression_blueprint.route("/regression/apply", methods=['GET'])
def launch_apply_ui() -> str:
return render_template('apply.html',
version=_version)
###############################################################################
# A P I R o u t e s #
###############################################################################
def get_experiment_from_request() -> RegressionExperiment:
selected_exp = request.args.get('selected_experiment_id', default=None,
type=lambda v: int(v) if v else None)
session_ref = request.args.get('session_ref', default='')
if selected_exp or selected_exp == 0:
exp = get_experiment(session_ref, selected_exp)
else:
# for now get most recent if none selected - consider if best
exp = get_experiments(session_ref)[-1]
return exp
@regression_blueprint.route("/api/regression/download", methods=['GET'])
def download_regression_model() -> Response:
exp = get_experiment_from_request()
artefact_path = get_serialised_model_artefact(exp)
fname = os.path.split(artefact_path)[-1]
resp = make_response(send_file(artefact_path, as_attachment=True, download_name=fname), HTTPStatus.OK)
resp.headers['Access-Control-Expose-Headers'] = 'Content-Disposition'
return resp
@regression_blueprint.route("/api/regression/get_model_artefact_json", methods=['GET'])
def get_model_artefact_as_str() -> Response:
exp = get_experiment_from_request()
session_ref = request.args.get('session_ref', default='')
model = get_model(ref=exp.model_ref)
data = lookup_dataframe(session_ref)
predictions = predict(data, model, exp.args.result_column)
artefact = get_model_artefact(exp)
# getting obj as encoded str: https://stackoverflow.com/a/30469744/2012446
pickled = codecs.encode(pickle.dumps(artefact, protocol=0), "base64").decode()
return jsonify(predictions=predictions, serialised_model_artefact=pickled)
# using POST here is an alternative to the 2 step option:
# 1. POST /api/add_session_data (data + model files) -> ref
# 2. GET /api/regression/apply?session_ref={ref}
@regression_blueprint.route("/api/regression/apply", methods=['GET', 'POST'])
def apply_regression_model() -> Response:
if request.method == 'GET':
session_ref = request.args.get('session_ref', default='')
exp = get_experiment(ref=session_ref, idx=0) # experiment should have been added to cache when sent via /api/add_session_data
else:
session_ref, _ = save_data_file(file_field_name='data')
exp = save_model_file(ref=session_ref, file_field_name='model')
model = get_model(ref=exp.model_ref)
data = lookup_dataframe(session_ref)
predictions = predict(data, model, exp.args.result_column)
return jsonify(predictions=predictions)
@regression_blueprint.route("/api/regression/train", methods=['GET'])
def train_regression() -> Response:
args = RegressionArgs(
# get query params
session_ref = request.args.get('session_ref', default=''),
result_column = request.args.get('result_column', default=''),
model_name = request.args.get('regression_model', default=''),
training_split = request.args.get('trn_split', default=0.8,
type=lambda v: float(v)),
random_seed = request.args.get('trn_split_random_seed', default=None,
type=lambda v: int(v) if v else None),
standardise = request.args.get('check_standardise', default=False,
type=lambda v: v.lower() == 'true'),
normalise = request.args.get('check_normalise', default=False,
type=lambda v: v.lower() == 'true'),
null_replacement=request.args.get('null_replacement', default=''),
fill_value=request.args.get('fill_value', default=None,
type=lambda v: float(v) if v else None)
)
data = lookup_dataframe(args.session_ref)
prev_experiments = get_experiments(args.session_ref)
matched_experiment = args.find_same_modelling_args(prev_experiments)
if matched_experiment:
exp_id = matched_experiment.id
evaluation = matched_experiment.eval
exp = matched_experiment
else:
exp_id = len(prev_experiments)
model = train(data=data, args=args)
evaluation = evaluate(data, model, args, exp_id)
model_ref = matched_experiment.model_ref if matched_experiment else register_model(model)
exp = RegressionExperiment(args=args, eval=evaluation, model_ref=model_ref, id=exp_id)
if not matched_experiment:
register_experiment(ref=args.session_ref, experiment=exp)
resp = {
'exp_id': exp_id,
'plot_uri': f"{request.root_url}{evaluation.act_vs_pred_uri.strip('/')}",
'metrics': [m._asdict() for m in evaluation.metrics]
}
return jsonify(resp)
@regression_blueprint.route("/api/v0/regression/train", methods=['GET'])
def train_regression_v0() -> Response:
args = RegressionArgs(
# get query params
session_ref = request.args.get('session_ref', default=''),
result_column = request.args.get('result_column', default=''),
model_name = request.args.get('regression_model', default=''),
training_split = request.args.get('trn_split', default=0.8,
type=lambda v: float(v)),
random_seed = request.args.get('trn_split_random_seed', default=None,
type=lambda v: int(v) if v else None),
standardise = request.args.get('check_standardise', default=False,
type=lambda v: v.lower() == 'true'),
normalise = request.args.get('check_normalise', default=False,
type=lambda v: v.lower() == 'true'),
null_replacement=request.args.get('null_replacement', default=''),
fill_value=request.args.get('fill_value', default=None,
type=lambda v: float(v) if v else None)
)
data = lookup_dataframe(args.session_ref)
prev_experiments = get_experiments(args.session_ref)
matched_experiment = args.find_same_modelling_args(prev_experiments)
trn_features, test_features, trn_labels, test_labels = split_data(data, args)
if matched_experiment:
exp_id = matched_experiment.id
evaluation = matched_experiment.eval
exp = matched_experiment
# retrain model if trn split or random seed has changed???
if (exp.args.training_split != args.training_split or
exp.args.random_seed != args.random_seed):
model = train(data=data, args=args)
exp.args = args
model = get_model(exp.model_ref)
test_predictions = model.predict(test_features)
trn_predictions = model.predict(trn_features)
else:
exp_id = len(prev_experiments)
model = train(data=data, args=args)
test_predictions = model.predict(test_features)
trn_predictions = model.predict(trn_features)
evaluation = build_evaluation(test_labels, test_predictions)
model_ref = matched_experiment.model_ref if matched_experiment else register_model(model)
exp = RegressionExperiment(args=args, eval=evaluation, model_ref=model_ref, id=exp_id)
if not matched_experiment:
register_experiment(ref=args.session_ref, experiment=exp)
resp = {
'exp_id': exp_id,
"predictions": {
"trn_pred": trn_predictions.tolist(),
"test_pred": test_predictions.tolist(),
"trn_labels": trn_labels.tolist(),
"test_labels": test_labels.tolist()
},
"metrics": {
"RMSE": evaluation.rmse,
"MnAE": evaluation.mean_abs_err,
"MdAE": evaluation.median_abs_err,
"R²": evaluation.r2
},
"args": exp.args
}
return jsonify(resp)
@regression_blueprint.route("/api/regression/predictions", methods=['GET'])
def get_predictions() -> Response:
exp = get_experiment_from_request()
data = lookup_dataframe(exp.args.session_ref)
model = get_model(exp.model_ref)
# TODO: matters that we are splitting again? should store outcome from training???
trn_features, test_features, trn_labels, test_labels = split_data(data, exp.args)
test_predictions = model.predict(test_features)
trn_predictions = model.predict(trn_features)
resp = {
"trn_pred": trn_predictions.tolist(),
"test_pred": test_predictions.tolist(),
"trn_labels": trn_labels.tolist(),
"test_labels": test_labels.tolist()
}
return jsonify(resp)
@regression_blueprint.route("/api/v0/regression/predictions", methods=['GET'])
def get_predictions_v0() -> Response:
exp = get_experiment_from_request()
data = lookup_dataframe(exp.args.session_ref)
model = get_model(exp.model_ref)
# TODO??: matters that we are splitting again? should store outcome from training???
# - wait until we have resolved question...
# https://trello.com/c/95Vsgr7o/43-ml-define-expected-behaviour-for-retraining-models
trn_features, test_features, trn_labels, test_labels = split_data(data, exp.args)
test_predictions = model.predict(test_features)
trn_predictions = model.predict(trn_features)
eval = build_evaluation(test_labels, test_predictions)
args = exp.args
# tmp - just do serialisiation here in spike for now
resp = {
"exp_id": exp.id,
"predictions": {
"trn_pred": trn_predictions.tolist(),
"test_pred": test_predictions.tolist(),
"trn_labels": trn_labels.tolist(),
"test_labels": test_labels.tolist()
},
"metrics": {
"RMSE": eval.rmse,
"MnAE": eval.mean_abs_err,
"MdAE": eval.median_abs_err,
"R²": eval.r2
},
"args": args
}
return jsonify(resp)
# @regression_blueprint.route("/api/regression/plots/pred_vs_act", methods=['GET'])
# def get_pred_vs_act_plot() -> Response:
# session_ref = request.args.get('session_ref', default='')
# path = get_experiments(session_ref)[-1].eval.act_vs_pred_plot_relative_path
# return make_response(send_file(path, as_attachment=True), HTTPStatus.OK)