Update pypi publish with 2FA (#367)

* remove pypi pass auth

* add changes and fix formatting

* add build

Author: patricktnast

.github/workflows/deploy.yml

@@ -7,6 +7,8 @@ on:
 jobs:
   deploy:
     runs-on: ubuntu-latest
+    permissions:
+      id-token: write
     steps:
       - uses: actions/checkout@v3
       - name: Set up Python
@@ -17,18 +19,15 @@ jobs:
         run: |
           python --version
           python -m pip install --upgrade pip
-          pip install setuptools wheel twine
+          pip install setuptools wheel build
       - name: Test
         run: |
           pip install .[test]
           pytest --runslow ./tests
-      - name: Build and publish
-        env:
-          TWINE_USERNAME: ${{ secrets.PYPI_USERNAME }}
-          TWINE_PASSWORD: ${{ secrets.PYPI_PASSWORD }}
-        run: |
-          python setup.py sdist bdist_wheel
-          twine upload dist/*
+      - name: Build
+        run: python -m build
+      - name: Publish
+        uses: pypa/gh-action-pypi-publish@release/v1
       - name: Send mail
         # Notify when cron job fails
         if: failure()
@@ -48,4 +47,4 @@ jobs:
           to: uw_ihme_simulationscience@uw.edu
           # from email name
           from: Pseudopeople Notifications
-          
+          

CHANGELOG.rst

@@ -1,24 +1,34 @@
+**0.8.3 - 01/09/24**
+
+ - Update PyPI to 2FA with trusted publisher
+
 **0.8.2 - 10/30/23**
-- Fixes a bug in date formatting
+
+ - Fixes a bug in date formatting
 
 **0.8.1 - 10/25/23**
+
  - Implements setuptools-scm for versioning
 
 **0.8.0 - 10/25/23**
+
  - Improve performance of dataset generation functions
 
 **0.7.2 - 10/16/23**
+
  - Drop support for python 3.8
  - Fix bug in "Choose the wrong option" noise type
  - Fixed minor bug in copy_from_household_member noise type
 
 **0.7.1 - 09/18/23**
+
  - Improved configuration validation
  - Security patch for configuration file loading
  - Fixed bug introduced by newest numpy release
  - Improved docstrings
 
 **0.7.0 - 09/08/23**
+
  - Added generate_taxes_1040 function
  - Added copy_from_household_member noise type
  - Improved performance of typographic noise type
@@ -29,25 +39,31 @@
  - Assorted bug fixes
 
 **0.6.5 - 05/09/23**
+
  - Hotfix to pin vivarium dependency
 
 **0.6.4 - 04/25/23**
+
  - Updated documentation
 
 **0.6.3 - 04/24/23**
+
  - Updated documentation
  - Added data access request to issue template
 
 **0.6.2 - 04/21/23**
+
  - Updated documentation
  - Updated progress bar behavior
 
 **0.6.1 - 04/21/23**
+
  - Updated documentation
  - Standardized configuration key names
  - Updated to account for changes to simulated population data schema
 
 **0.6.0 - 04/19/23**
+
  - Update documentation (landing page, datasets section, quickstart)
  - Update zipcode miswriting function to act on each digit independently
  - Modify config key names
@@ -61,6 +77,7 @@
  - Add a github issues template
 
 **0.5.1 - 04/14/23**
+
  - Formatting of noised dates implemented
  - Moved from pd.NA to np.nan
  - Added validation of user-supplied configuration
@@ -69,6 +86,7 @@
  - Set default logging level to 'INFO', configurable with 'verbose' flag
 
 **0.5.0 - 04/13/23**
+
  - Bugfix to apply incorrect selection noising at the expected probability
  - Implement the omission noise function
  - Implement schema for output columns and their dtypes
@@ -77,6 +95,7 @@
  - Update documentation
 
  **0.4.0 - 04/11/23**
+
  - Generate default configuration instead of maintaining a static file
  - Read sample data if no data argument is provided
  - Update sample datasets