1- SHELL := /bin/bash
2- this_makefile := $(lastword $(MAKEFILE_LIST ) ) # Used to automatically list targets
3- .DEFAULT_GOAL := list # If someone runs "make", run "make list"
4-
5- # Source files to format, lint, and type check.
6- LOCATIONS =src tests
7-
8- # Unless overridden, build conda environment using the package name.
9- PACKAGE_NAME = vivarium
10- SAFE_NAME = $(shell python -c "from pkg_resources import safe_name; print(safe_name(\"$(PACKAGE_NAME ) \") )")
11-
12- setup_file = $(shell find -name setup.py)
13- version_line = $(shell grep "version = " ${setup_file})
14- PACKAGE_VERSION = $(shell echo ${version_line} | cut -d "=" -f 2 | xargs)
15-
16- # Use this URL to pull IHME Python packages and deploy this package to PyPi.
17- IHME_PYPI := https://artifactory.ihme.washington.edu/artifactory/api/pypi/pypi-shared/
18-
19- # If CONDA_ENV_PATH is set (from a Jenkins build), use the -p flag when making Conda env in
20- # order to make env at specific path. Otherwise, make a named env at the default path using
21- # the -n flag.
22- PYTHON_VERSION ?= 3.11
23- CONDA_ENV_NAME ?= ${PACKAGE_NAME}_py${PYTHON_VERSION}
24- CONDA_ENV_CREATION_FLAG = $(if $(CONDA_ENV_PATH ) ,-p ${CONDA_ENV_PATH},-n ${CONDA_ENV_NAME})
25-
26- # These are the doc and source code files in this repo.
27- # When one of these files changes, it means that Make targets need to run again.
28- MAKE_SOURCES := $(shell find . -type d -name "* " ! -path "./.git* " ! -path "./.vscode" ! -path "./output" ! -path "./output/* " ! -path "./archive" ! -path "./dist" ! -path "./output/htmlcov* " ! -path "** /.pytest_cache* " ! -path "** /__pycache__" ! -path "./output/docs_build* " ! -path "./.pytype* " ! -path "." ! -path "./src/${PACKAGE_NAME}/legacy* " ! -path ./.history ! -path "./.history/* " ! -path "./src/${PACKAGE_NAME}.egg-info" ! -path ./.idea ! -path "./.idea/* " )
29-
30-
31- # Phony targets don't produce artifacts.
32- .PHONY : .list-targets build-env clean debug deploy-doc deploy-package full help install list quick
33-
34- # List of Make targets is generated dynamically. To add description of target, use a # on the target definition.
35- list help : debug .list-targets
36-
37- .list-targets : # Print available Make targets
38- @echo
39- @echo " Make targets:"
40- @grep -i " ^[a-zA-Z][a-zA-Z0-9_ \.\-]*: .*[#].*" ${this_makefile} | sort | sed ' s/:.*#/ : /g' | column -t -s:
41- @echo
42-
43- debug : # Print debug information (environment variables)
44- @echo " 'make' invoked with these environment variables:"
45- @echo " CONDA_ENV_NAME: ${CONDA_ENV_NAME} "
46- @echo " IHME_PYPI: ${IHME_PYPI} "
47- @echo " LOCATIONS: ${LOCATIONS} "
48- @echo " PACKAGE_NAME: ${PACKAGE_NAME} "
49- @echo " PACKAGE_VERSION: ${PACKAGE_VERSION} "
50- @echo " PYPI_ARTIFACTORY_CREDENTIALS_USR: ${PYPI_ARTIFACTORY_CREDENTIALS_USR} "
51- @echo " Make sources: ${MAKE_SOURCES} "
52-
53- build-env : # Make a new conda environment
54- @[ " ${CONDA_ENV_NAME} " && echo " " > /dev/null || ( echo " CONDA_ENV_NAME is not set" ; exit 1 )
55- conda create ${CONDA_ENV_CREATION_FLAG} python=${PYTHON_VERSION} --yes
56-
57- install : # Install setuptools, install this package in editable mode
58- pip install --upgrade pip setuptools
59- pip install -e .[DEV]
60- @cd ..
1+ # Check if we're running in Jenkins
2+ ifdef JENKINS_URL
3+ # Files are already in workspace from shared library
4+ MAKE_INCLUDES := .
5+ else
6+ # For local dev, search in parent directory
7+ MAKE_INCLUDES := ../vivarium_build_utils/resources/makefiles
8+ endif
9+
10+ PACKAGE_NAME = vivarium_testing_utils
11+
12+ .PHONY : install
13+ install : # # Install setuptools, package, and build utilities
14+ pip install uv
15+ uv pip install --upgrade pip setuptools
16+ uv pip install -e .[DEV]
6117 @echo " ----------------------------------------"
62- @if [ ! -d " vivarium_build_utils" ; then \
18+ @if [ ! -d " ../ vivarium_build_utils" ; then \
6319 # Clone the build utils repo if it doesn't exist. \
64- git clone https://github.com/ihmeuw/vivarium_build_utils.git; \
20+ git clone https://github.com/ihmeuw/vivarium_build_utils.git ../vivarium_build_utils ; \
6521 else \
6622 echo " vivarium_build_utils already exists. Skipping clone." ; \
6723 fi
68- @echo " Contents of install_dependency_branch.sh"
69- @echo " ----------------------------------------"
70- @cat vivarium_build_utils/install_dependency_branch.sh
71- @echo " "
72- @echo " ----------------------------------------"
73- @sh vivarium_build_utils/install_dependency_branch.sh layered_config_tree ${GIT_BRANCH} jenkins
74-
75- format : setup.py pyproject.toml $(MAKE_SOURCES ) # Run the code formatter and import sorter
76- black $(LOCATIONS )
77- isort $(LOCATIONS )
78- mypy $(LOCATIONS )
79- @echo " Ignore, Created by Makefile, ` date` " > $@
80-
81- lint : .flake8 .bandit $(MAKE_SOURCES ) # Run the code linter and package security vulnerability checker
82- -flake8 $(LOCATIONS )
83- -safety check
84- @echo " Ignore, Created by Makefile, ` date` " > $@
85-
86- integration : $(MAKE_SOURCES ) # Run the end-to-end tests
87- export COVERAGE_FILE=./output/.coverage.integration
88- pytest --runslow tests --cov --cov-report term --cov-report html:./output/htmlcov_integration
89- @echo " Ignore, Created by Makefile, ` date` " > $@
90-
91- build-doc : $(MAKE_SOURCES ) # Build the Sphinx docs
92- $(MAKE ) -C docs/ html
93- @echo " Ignore, Created by Makefile, ` date` " > $@
94-
95- build-package : $(MAKE_SOURCES ) # Build the package as a pip wheel
96- pip install build
97- python -m build
98- @echo " Ignore, Created by Makefile, ` date` " > $@
9924
100- clean : # Delete build artifacts and do any custom cleanup such as spinning down services
101- @rm -rf format lint build-doc build-package integration .pytest_cache
102- @rm -rf dist output
103- $(shell find . -type f -name '* py[co]' -delete -o -type d -name __pycache__ -delete)
25+ # Include the makefiles
26+ include $(MAKE_INCLUDES ) /base.mk
27+ include $(MAKE_INCLUDES ) /test.mk
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