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Package: immundata
Title: A Unified Data Layer for Large-Scale Single-Cell, Spatial and Bulk Immunomics
Version: 0.0.5
Authors@R:
person("Vadim I.", "Nazarov", , "support@immunomind.com", role = c("aut", "cre"),
comment = c(ORCID = "0000-0003-3659-2709"))
Contact: support@immunomind.com
Description: Provides a unified data layer for single-cell, spatial and bulk
T-cell and B-cell immune receptor repertoire data. Think AnnData or SeuratObject,
but for AIRR data, a.k.a. Adaptive Immune Receptor Repertoire, VDJ-seq, RepSeq, or
VDJ sequencing data.
License: Apache License (>= 2)
URL: https://immunomind.github.io/docs/, https://github.com/immunomind/immundata
BugReports: https://github.com/immunomind/immundata/issues
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.3
Depends:
R (>= 4.1.0),
dplyr,
duckplyr (>= 1.1.0)
Imports:
checkmate,
cli,
dbplyr,
ggplot2,
glue,
jsonlite (>= 2.0.0),
lifecycle,
R6,
readr,
rlang,
tibble,
tools,
utils
Suggests:
rmarkdown,
testthat (>= 3.0.0),
Seurat
Config/testthat/edition: 3
Config/testthat/parallel: true