|
1100 | 1100 | {"olsdialog/*": {"remaining": [{"name": "ols-dialog", "types": "app", "source": ["biotools"], "description": "Java front end to the ontology lookup service (OLS).", "repository": [], "webpage": ["compomics.github.io/projects/ols-dialog"], "id": "biotools/ols-dialog/app/3.4.3"}, {"name": "ols-dialog", "types": "cmd", "source": ["biotools"], "description": "Java front end to the ontology lookup service (OLS).", "repository": [], "webpage": ["compomics.github.io/projects/ols-dialog"], "id": "biotools/ols-dialog/cmd/3.4.3"}], "disconnected": [{"name": "ols_dialog", "types": "app", "source": ["biotools"], "description": "Java front end to the\u00a0Ontology Lookup Service\u00a0allowing easy access to an extensive list of biomedical ontologies.", "repository": [], "webpage": ["code.google.com/p/ols-dialog"], "id": "biotools/ols_dialog/app/None"}]}} |
1101 | 1101 | {"gprofiler/*": {"remaining": [{"name": "gprofile_r", "types": "lib", "source": ["biotools"], "description": "GProfileR performs functional enrichment analysis, gene identifier conversion and mapping homologous genes across related organisms via the 'g:Profiler' toolkit. The tool performs statistical enrichment analysis to find over-representation of information like Gene Ontology terms, biological pathways, regulatory DNA elements, human disease gene annotations, and protein-protein interaction networks. The basic input is a list of genes.", "repository": [], "webpage": ["cran.r-project.org/web/packages/gprofiler/index"], "id": "biotools/gprofile_r/lib/0.6.1"}, {"name": "gprofile_r", "types": "suite", "source": ["biotools"], "description": "GProfileR performs functional enrichment analysis, gene identifier conversion and mapping homologous genes across related organisms via the 'g:Profiler' toolkit. The tool performs statistical enrichment analysis to find over-representation of information like Gene Ontology terms, biological pathways, regulatory DNA elements, human disease gene annotations, and protein-protein interaction networks. The basic input is a list of genes.", "repository": [], "webpage": ["cran.r-project.org/web/packages/gprofiler/index"], "id": "biotools/gprofile_r/suite/0.6.1"}], "disconnected": [{"name": "gprofiler", "types": "suite", "source": ["biotools"], "description": "Public web server with several tools to perform functional enrichment analyses and mine additional information about gene functions. The used data is synchronized with Ensembl database in quarterly updates.", "repository": [], "webpage": ["biit.cs.ut.ee/gprofiler"], "id": "biotools/gprofiler/suite/None"}]}} |
1102 | 1102 | {"stepwisecm/*": {"remaining": [{"name": "stepwisecm", "types": "cmd", "source": ["biotools"], "description": "This package implements a cancer samples classification strategy using multiple data sets. It uses the data type for which full measurements are available at the first stage, and the data type for which only partial measurements are available at the second stage. For incoming new samples, it quantifies how much improvement will be obtained if covariates of new samples for the data types at the second stage are measured.", "repository": [], "webpage": ["bioconductor.riken.jp/packages/3.1/bioc/html/stepwisecm"], "id": "biotools/stepwisecm/cmd/1.20.0"}, {"name": "stepwisecm", "types": "lib", "source": ["biotools"], "description": "This package implements a cancer samples classification strategy using multiple data sets. It uses the data type for which full measurements are available at the first stage, and the data type for which only partial measurements are available at the second stage. For incoming new samples, it quantifies how much improvement will be obtained if covariates of new samples for the data types at the second stage are measured.", "repository": [], "webpage": ["bioconductor.riken.jp/packages/3.1/bioc/html/stepwisecm"], "id": "biotools/stepwisecm/lib/1.20.0"}], "disconnected": [{"name": "stepwisecm", "types": "lib", "source": ["bioconductor"], "description": "Stepwise classification of cancer samples using multiple data sets. This package implements the classification strategy using two heterogeneous data sets without actually combining them. Package uses the data type for which full measurements are available at the first stage, and the data type for which only partial measurements are available at the second stage. For incoming new samples package quantifies how much improvement will be obtained if covariates of new samples for the data types at the second stage are measured. This packages suits for the application where study goal is not only obtain high classification accuracy, but also requires economically cheap classifier.", "repository": ["bioconductor.org/packages/stepwisecm"], "webpage": ["bioconductor.org/packages/stepwisecm"], "id": "bioconductor/stepwisecm/lib/1.25.0"}]}} |
1103 | | -{"adam/*_secondary_1": {"remaining": [{"id": "biotools/ada-m/undefined/None"}], "disconnected": [{"id": "biotools/adam/cmd/None"}], "parent_block_id": "adam/*", "generated_at": "2026-04-20T16:34:27.125875"}} |
1104 | | -{"freebayes/*_secondary_2": {"remaining": [{"id": "galaxy/freebayes/cmd/1.1.0.46-0"}], "disconnected": [{"id": "github/freebayes/None/None"}], "parent_block_id": "freebayes/*", "generated_at": "2026-04-20T16:34:27.125962"}} |
1105 | | -{"csaw/*_secondary_3": {"remaining": [{"id": "bioconda_recipes/gsea/cmd/4.3.2"}], "disconnected": [{"id": "biotools/gsea/cmd/None"}], "parent_block_id": "csaw/*", "generated_at": "2026-04-20T16:34:27.127141"}} |
1106 | | -{"atlas/*_secondary_4": {"remaining": [{"id": "biotools/atlas/cmd/2005"}], "disconnected": [{"id": "bioconda_recipes/atlas/cmd/0.9.9"}], "parent_block_id": "atlas/*", "generated_at": "2026-04-20T16:34:27.127595"}} |
1107 | | -{"ica/*_secondary_5": {"remaining": [{"id": "biotools/biodica/app/None"}], "disconnected": [{"id": "sourceforge/ica/None/None"}], "parent_block_id": "ica/*", "generated_at": "2026-04-20T16:34:27.127777"}} |
1108 | | -{"bioc/*_secondary_6": {"remaining": [{"id": "biotools/bio_c/cmd/1.0"}], "disconnected": [{"id": "sourceforge/bioc/None/None"}], "parent_block_id": "bioc/*", "generated_at": "2026-04-20T16:34:27.128045"}} |
1109 | | -{"mango/*_secondary_7": {"remaining": [{"id": "biotools/mango/cmd/None"}], "disconnected": [{"id": "github/mango/None/None"}], "parent_block_id": "mango/*", "generated_at": "2026-04-20T16:34:27.128117"}} |
1110 | | -{"cogent/*_secondary_8": {"remaining": [{"id": "bioconda_recipes/cogent/lib/1.9"}], "disconnected": [{"id": "biotools/cogent/lib/None"}], "parent_block_id": "cogent/*", "generated_at": "2026-04-20T16:34:27.128352"}} |
1111 | | -{"intact/*_secondary_9": {"remaining": [{"id": "biotools/intact/db/None"}], "disconnected": [{"id": "sourceforge/intact/None/None"}], "parent_block_id": "intact/*", "generated_at": "2026-04-20T16:34:27.128377"}} |
1112 | | -{"bamstats/*_secondary_10": {"remaining": [{"id": "biotools/bamstats/web/1.0.0"}], "disconnected": [{"id": "sourceforge/bamstats/None/None"}], "parent_block_id": "bamstats/*", "generated_at": "2026-04-20T16:34:27.128569"}} |
1113 | | -{"chipseq/*_secondary_11": {"remaining": [{"id": "biotools/chip-seq/soap/None"}], "disconnected": [{"id": "sourceforge/chip-seq/None/None"}], "parent_block_id": "chipseq/*", "generated_at": "2026-04-20T16:34:27.128749"}} |
1114 | | -{"conifer/*_secondary_12": {"remaining": [{"id": "biotools/conifer/script/None"}], "disconnected": [{"id": "sourceforge/conifer/None/None"}], "parent_block_id": "conifer/*", "generated_at": "2026-04-20T16:34:27.129511"}} |
1115 | | -{"mia/*_secondary_13": {"remaining": [{"id": "biotools/m_ia/app/None"}], "disconnected": [{"id": "biotools/mia/app/None"}], "parent_block_id": "mia/*", "generated_at": "2026-04-20T16:34:27.129691"}} |
1116 | | -{"rmap/*_secondary_14": {"remaining": [{"id": "bioconda_recipes/rmap/cmd/2.1"}], "disconnected": [{"id": "biotools/rmap/cmd/None"}], "parent_block_id": "rmap/*", "generated_at": "2026-04-20T16:34:27.129731"}} |
1117 | | -{"gmdr/*_secondary_15": {"remaining": [{"id": "biotools/gmd-r/lib/0.3.3"}], "disconnected": [{"id": "sourceforge/gmdr/None/None"}], "parent_block_id": "gmdr/*", "generated_at": "2026-04-20T16:34:27.130550"}} |
1118 | | -{"pscan/*_secondary_16": {"remaining": [{"id": "biotools/p-scan/cmd/None"}], "disconnected": [{"id": "biotools/pscan/cmd/r6"}], "parent_block_id": "pscan/*", "generated_at": "2026-04-20T16:34:27.131713"}} |
1119 | | -{"spark/*_secondary_17": {"remaining": [{"id": "biotools/spar-k/cmd/None"}], "disconnected": [{"id": "biotools/spark/undefined/None"}], "parent_block_id": "spark/*", "generated_at": "2026-04-20T16:34:27.132526"}} |
1120 | | -{"ctd/*_secondary_18": {"remaining": [{"id": "bioconductor/ctd/lib/0.99.5"}], "disconnected": [{"id": "sourceforge/ctd/None/None"}], "parent_block_id": "ctd/*", "generated_at": "2026-04-20T16:34:27.132930"}} |
1121 | | -{"canopy/*_secondary_19": {"remaining": [{"id": "biotools/canopy/cmd/None"}], "disconnected": [{"id": "sourceforge/canopy/None/None"}], "parent_block_id": "canopy/*", "generated_at": "2026-04-20T16:34:27.133284"}} |
0 commit comments