From dab12bf2d4c16e7609ca6a5c955c92838d12c5e9 Mon Sep 17 00:00:00 2001 From: natachaperez Date: Tue, 30 Jul 2019 12:04:13 +0200 Subject: [PATCH] context file to map JSON attributes in BIDS to NIDM-experiment URLs and preferred labels added --- .../nidm-experiment/terms/nidm-experiment.owl | 661 ++++++++++++------ nidm/nidm-experiment/terms/nidme.json | 285 ++++++++ 2 files changed, 715 insertions(+), 231 deletions(-) create mode 100644 nidm/nidm-experiment/terms/nidme.json diff --git a/nidm/nidm-experiment/terms/nidm-experiment.owl b/nidm/nidm-experiment/terms/nidm-experiment.owl index fa53c1126..f35f3cda3 100644 --- a/nidm/nidm-experiment/terms/nidm-experiment.owl +++ b/nidm/nidm-experiment/terms/nidm-experiment.owl @@ -153,67 +153,79 @@ nidm:NIDM_0000010 rdf:type owl:ObjectProperty ; obo:IAO_0000114 obo:IAO_0000122 ; - rdfs:range nidm:NIDM_0000155 . + rdfs:range nidm:NIDM_0000155 ; + + "hadfMRIDesign" . ### http://purl.org/nidash/nidm#hadForProperPart -nidm:hadForProperPart rdf:type owl:ObjectProperty . +nidm:hadForProperPart rdf:type owl:ObjectProperty ; + "HadForProperPart" . ### http://purl.org/nidash/nidm#hadForScale -nidm:hadForScale rdf:type owl:ObjectProperty . +nidm:hadForScale rdf:type owl:ObjectProperty ; + "hadForScale" . ### http://purl.org/nidash/nidm#hadForSubinstrument -nidm:hadForSubinstrument rdf:type owl:ObjectProperty . +nidm:hadForSubinstrument rdf:type owl:ObjectProperty ; + "hadForSubinstrument" . ### http://purl.org/nidash/nidm#hadForVariable -nidm:hadForVariable rdf:type owl:ObjectProperty . +nidm:hadForVariable rdf:type owl:ObjectProperty ; + "hadForVariable" . ### http://purl.org/nidash/nidm#wasMeasuredBy -nidm:wasMeasuredBy rdf:type owl:ObjectProperty . +nidm:wasMeasuredBy rdf:type owl:ObjectProperty ; + "wasMeasuredBy" . ### http://purl.org/nidash/nidm#wasScaleOf -nidm:wasScaleOf rdf:type owl:ObjectProperty . +nidm:wasScaleOf rdf:type owl:ObjectProperty ; + "wasScaleOf" . ### http://www.w3.org/ns/prov#hadMember -prov:hadMember rdf:type owl:ObjectProperty . +prov:hadMember rdf:type owl:ObjectProperty ; + "hadMember" . ### http://www.w3.org/ns/prov#hadRole -prov:hadRole rdf:type owl:ObjectProperty . +prov:hadRole rdf:type owl:ObjectProperty ; + "hadRole" . ### http://www.w3.org/ns/prov#used -prov:used rdf:type owl:ObjectProperty . +prov:used rdf:type owl:ObjectProperty ; + "used" . ### http://www.w3.org/ns/prov#wasCreatedBy -prov:wasCreatedBy rdf:type owl:ObjectProperty . +prov:wasCreatedBy rdf:type owl:ObjectProperty ; + "wasCreatedBy" . @@ -228,35 +240,40 @@ prov:wasCreatedBy rdf:type owl:ObjectProperty . dct:description rdf:type owl:DatatypeProperty ; - rdfs:subPropertyOf owl:topDataProperty . + rdfs:subPropertyOf owl:topDataProperty ; + "description" . ### http://www.semanticdesktop.org/ontologies/2007/03/22/nfo#fileName -nfo:fileName rdf:type owl:DatatypeProperty . +nfo:fileName rdf:type owl:DatatypeProperty ; + "fileName" . ### http://purl.org/dc/terms/license -dct:license rdf:type owl:DatatypeProperty . - +dct:license rdf:type owl:DatatypeProperty ; + "license" . ### http://purl.org/dc/terms/source -dct:source rdf:type owl:DatatypeProperty . +dct:source rdf:type owl:DatatypeProperty ; + "source" . ### http://purl.org/dc/terms/title -dct:title rdf:type owl:DatatypeProperty . +dct:title rdf:type owl:DatatypeProperty ; + "title" . ### http://purl.org/nidash/nidm#hadNumericalValue -nidm:hadNumericalValue rdf:type owl:DatatypeProperty . +nidm:hadNumericalValue rdf:type owl:DatatypeProperty ; + "hadNumericalValue" . @@ -268,7 +285,8 @@ nidm:BathSolution rdf:type owl:DatatypeProperty ; obo:IAO_0000115 "A bath solution is a property that associates a string describing the solution that engulfs a sample with the data acquisition object obtained from that sample."^^xsd:string ; - obo:IAO_0000116 "To be discussed"^^xsd:string . + obo:IAO_0000116 "To be discussed"^^xsd:string ; + "BathSolution" . @@ -280,7 +298,8 @@ nidm:CellType rdf:type owl:DatatypeProperty ; obo:IAO_0000115 "Cell type is property that associates a string that is the name of the cells on which measurements are made, with a data acquisition object."^^xsd:string ; - obo:IAO_0000116 "To be discussed"^^xsd:string . + obo:IAO_0000116 "To be discussed"^^xsd:string ; + "CellType" . @@ -292,7 +311,8 @@ nidm:ChannelNumber rdf:type owl:DatatypeProperty ; obo:IAO_0000115 "Channel number is property that associates the numeric label of a data acquisition channel of a device to the data acquisition object that was acquired using that device."^^xsd:string ; - obo:IAO_0000116 "To be discussed"^^xsd:string . + obo:IAO_0000116 "To be discussed"^^xsd:string ; + "ChannelNumber" . @@ -304,7 +324,8 @@ nidm:ElectrodeImpedance rdf:type owl:DatatypeProperty ; obo:IAO_0000115 "Electrode impedance is property that associates the numeric value of the ratio of the voltage across the electrodes to the measured AC current (impedance) with the data acquisition object that was acquired."^^xsd:string ; - obo:IAO_0000116 "To be discussed"^^xsd:string . + obo:IAO_0000116 "To be discussed"^^xsd:string ; + "ElectrodeImpedance" . @@ -316,7 +337,8 @@ nidm:GroupLabel rdf:type owl:DatatypeProperty ; obo:IAO_0000115 "Group label is a property that associates the label used to denote membership in a particular collection with a person or sample."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "GroupLabel" . @@ -328,7 +350,8 @@ nidm:HollowElectrodeSolution rdf:type owl:DatatypeProperty ; obo:IAO_0000115 "A hollow electrode solution is a property that associates a string describing the solution that is placed in a hollow electrode used to make an electrophysiology measurement with the data acquisition object obtained from that sample."^^xsd:string ; - obo:IAO_0000116 "To be discussed"^^xsd:string . + obo:IAO_0000116 "To be discussed"^^xsd:string ; + "HollowElectrodeSolution" . @@ -340,7 +363,8 @@ nidm:hadImageContrastType rdf:type owl:DatatypeProperty ; obo:IAO_0000115 "Image contrast type is a property that associates a string that deswcribes the physical parameter that was manipulated to achieve the contrast of a given image with that image data acquisition object."^^xsd:string ; - obo:IAO_0000116 "To be discussed"^^xsd:string . + obo:IAO_0000116 "To be discussed"^^xsd:string ; + "hadImageContrastType" . @@ -352,7 +376,8 @@ nidm:hadImageUsageType rdf:type owl:DatatypeProperty ; obo:IAO_0000115 "Had Image usage type is a property that associates a string that describes the purpose for which an image was acquired with the image data acquisition object."^^xsd:string ; - obo:IAO_0000116 "To be discussed"^^xsd:string . + obo:IAO_0000116 "To be discussed"^^xsd:string ; + "HadImageUsageType" . @@ -364,7 +389,8 @@ nidm:NumberOfChannels rdf:type owl:DatatypeProperty ; obo:IAO_0000115 "Number of channels is a property that associates the number of data acquisition meassurenments concurrently acquired by a data acquisition device to the data acquisition object acquired by that device."^^xsd:string ; - obo:IAO_0000116 "To be discussed"^^xsd:string . + obo:IAO_0000116 "To be discussed"^^xsd:string ; + "NumberOfChannels" . @@ -376,7 +402,8 @@ nidm:AppliedFilter rdf:type owl:DatatypeProperty ; obo:IAO_0000115 "Applied filter is a property that associates the string name of the filter type used to remove or modify certain components of the input signal with a data acquisition object that includes that signal."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "AppliedFilter" . @@ -388,7 +415,8 @@ nidm:SolutionFlowSpeed rdf:type owl:DatatypeProperty ; obo:IAO_0000115 "Solution flow speed is a property that associates the value of the speed at which the bathing solution moves across the sample with a data acquisition object."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "SolutionFlowSpeed" . @@ -400,7 +428,8 @@ nidm:RecordingLocation rdf:type owl:DatatypeProperty ; obo:IAO_0000115 "Recording location is a property that associates a string that describes the anatomical location at which the electrophysiological measurement was made with a data acquisition object."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "RecordingLocation" . @@ -422,7 +451,8 @@ nidm:Acquisition rdf:type owl:Class ; obo:IAO_0000114 obo:IAO_0000428 ; - rdfs:subClassOf prov:Activity . + rdfs:subClassOf prov:Activity ; + "Acquisition" . @@ -439,7 +469,8 @@ nidm:AcquisitionDeviceOperator rdf:type owl:Class ; rdfs:comment "The use of who/that indicates that the agent performing this role can either be a person or another device." ; - rdfs:subClassOf prov:Role . + rdfs:subClassOf prov:Role ; + "AcquisitionDeviceOperator" . @@ -454,7 +485,8 @@ nidm:AcquisitionMethod rdf:type owl:Class ; obo:IAO_0000114 obo:IAO_0000428 ; - rdfs:subClassOf nidm:AcquisitionObjectQuality . + rdfs:subClassOf nidm:AcquisitionObjectQuality ; + "AcquisitionMethod" . @@ -468,7 +500,8 @@ nidm:AcquisitionModality rdf:type owl:Class ; obo:IAO_0000114 obo:IAO_0000428 ; - rdfs:subClassOf nidm:AcquisitionObjectQuality . + rdfs:subClassOf nidm:AcquisitionObjectQuality ; + "AcquisitionModality" . @@ -484,7 +517,8 @@ nidm:AcquisitionObject rdf:type owl:Class ; obo:IAO_0000114 obo:IAO_0000428 ; - obo:IAO_0000117 . + obo:IAO_0000117 ; + "AcquisitionObject" . @@ -498,7 +532,8 @@ nidm:AcquisitionObjectQuality rdf:type owl:Class ; obo:IAO_0000114 obo:IAO_0000428 ; - rdfs:subClassOf obo:PATO_0000001 . + rdfs:subClassOf obo:PATO_0000001 ; + "AcquisitionObjectQuality" . @@ -512,7 +547,8 @@ nidm:Amperometry rdf:type owl:Class ; obo:IAO_0000114 obo:IAO_0000428 ; - rdfs:subClassOf nidm:AcquisitionMethod . + rdfs:subClassOf nidm:AcquisitionMethod ; + "Amperometry" . @@ -526,7 +562,8 @@ nidm:Anatomical rdf:type owl:Class ; obo:IAO_0000114 obo:IAO_0000428 ; - rdfs:subClassOf nidm:ImageUsageType . + rdfs:subClassOf nidm:ImageUsageType ; + "Anatomical" . @@ -540,7 +577,8 @@ nidm:ArterialSpinLabeling rdf:type owl:Class ; obo:IAO_0000114 obo:IAO_0000428 ; - rdfs:subClassOf nidm:AcquisitionMethod . + rdfs:subClassOf nidm:AcquisitionMethod ; + "ArterialSpineLabeling" . @@ -554,7 +592,8 @@ nidm:Attenuator rdf:type owl:Class ; obo:IAO_0000115 "An attenuator is a device that reduces the amplitude of an input signal by a fixed amount while keeping the timecourse of the signal essentially unchanged." ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "Attenuator" . @@ -570,8 +609,9 @@ nidm:AuxiliaryFile rdf:type owl:Class ; rdfs:comment "An example of a file that informs the execution of an experiment is a b-vector file in diffusion-weighted MR imaging. An example of a file that is generated during the execution of the experiment is a stimulus response file in functional MR imaging)"^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . - + obo:IAO_0000114 obo:IAO_0000428 ; + "AuxiliaryFile" . + ### http://purl.org/nidash/nidm#AuxiliaryFileCollection @@ -588,7 +628,8 @@ nidm:AuxiliaryFileCollection rdf:type owl:Class ; rdfs:comment "An example of an auxiliary file collection is the b-value and b-vector files in diffusion-weighted MR imaging."^^xsd:string ; - prov:wasAssociatedWith nidm:AcquisitionObject . + prov:wasAssociatedWith nidm:AcquisitionObject ; + "AuxiliaryFileCollection" . @@ -602,7 +643,8 @@ nidm:BandpassFilter rdf:type owl:Class ; obo:IAO_0000115 "A bandpass filter is a device that modifies or removes certain signal components outside a selected frequency range from an electrical signal." ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "BandPassFilter" . @@ -616,7 +658,8 @@ nidm:BehavioralInstrument rdf:type owl:Class ; obo:IAO_0000114 obo:IAO_0000428 ; - rdfs:subClassOf nidm:InstrumentUsageType . + rdfs:subClassOf nidm:InstrumentUsageType ; + "BehavioralInstrument" . @@ -633,23 +676,8 @@ nidm:NIDM_0000152 rdf:type owl:Class ; obo:IAO_0000116 "Discussed at https://github.com/incf-nidash/nidm/issues/299"^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . - - - -### http://purl.org/nidash/nidm#Cartesian - -nidm:Cartesian rdf:type owl:Class ; - - rdfs:label "Cartesian"^^xsd:string ; - - obo:IAO_0000115 "Cartesian is a k-space traversal scheme in MRI in which the path of the data acquisition follows a straight line parallel to one axis of the defined k-space and perpendicular to the other k=space axis."^^xsd:string ; - - obo:IAO_0000114 obo:IAO_0000428 ; - - rdfs:subClassOf nidm:k-spaceTraversalScheme ; - - owl:synonym nidm:Rectilinear . + obo:IAO_0000114 obo:IAO_0000428 ; + "Block-BasedDesign" . @@ -665,8 +693,8 @@ nidm:Cartesian rdf:type owl:Class ; rdfs:subClassOf nidm:k-spaceTraversalScheme ; - owl:synonym nidm:Rectilinear . - + owl:synonym nidm:Rectilinear ; + "Cartesian" . @@ -680,7 +708,8 @@ nidm:CoInvestigator rdf:type owl:Class ; obo:IAO_0000114 obo:IAO_0000428 ; - obo:IAO_0000115 "A co-investigator is a role for a person that shares responsibility for the oversight and performance of an investigation activity." . + obo:IAO_0000115 "A co-investigator is a role for a person that shares responsibility for the oversight and performance of an investigation activity." ; + "CoInvestigator" . @@ -694,7 +723,8 @@ nidm:CurrentAmplifier rdf:type owl:Class ; obo:IAO_0000115 "A current amplifier is a device that increases the electrical current amplitude of an input electrical signal by a fixed amount, while keeping the voltage constant." ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "CurrentAmplifier" . @@ -708,7 +738,8 @@ nidm:CurrentClamp rdf:type owl:Class ; obo:IAO_0000115 "A current clamp is an intracellular electrophysiology acquisition method in which current is injected into a cell and the voltage generated by the cell is recorded." ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "CurrentClamp" . @@ -722,7 +753,8 @@ nidm:DataAcquisitionDevice rdf:type owl:Class ; obo:IAO_0000115 "A data acquisition device is a device that collects a packet or stream of analog or digital information from an entity." ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "DataAcquisitionDevice" . @@ -736,7 +768,11 @@ nidm:DataProcessingDevice rdf:type owl:Class ; obo:IAO_0000115 "A data processing device is a device that manipulates a data packet, stream, or file by performing an operation on the data." ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "DataProcessingDevice" . + + + @@ -752,7 +788,8 @@ nidm:DemographicsInstrument rdf:type owl:Class ; rdfs:comment "Common demographics information are variables such as age, handedness, phenotypic sex, ethnicity, and race." ; - rdfs:subClassOf nidm:InstrumentUsageType . + rdfs:subClassOf nidm:InstrumentUsageType ; + "DemographicsInstrument" . @@ -769,7 +806,8 @@ nidm:DICOMTagCollection rdf:type owl:Class ; obo:IAO_0000114 obo:IAO_0000428 ; - prov:wasAssociatedWith nidm:AcquisitionObject . + prov:wasAssociatedWith nidm:AcquisitionObject ; + "DICOMTagCollection" . @@ -784,7 +822,8 @@ nidm:DiffusionTensor rdf:type owl:Class ; obo:IAO_0000114 obo:IAO_0000428 ; - rdfs:subClassOf nidm:ImageUsageType . + rdfs:subClassOf nidm:ImageUsageType ; + "DiffusionTensor" . @@ -798,7 +837,8 @@ nidm:DiffusionWeighted rdf:type owl:Class ; obo:IAO_0000114 obo:IAO_0000428 ; - rdfs:subClassOf nidm:ImageContrastType . + rdfs:subClassOf nidm:ImageContrastType ; + "DiffusionWeighted" . @@ -812,7 +852,8 @@ nidm:DynamicContrastEnhanced rdf:type owl:Class ; obo:IAO_0000114 obo:IAO_0000428 ; - rdfs:subClassOf nidm:AcquisitionMethod . + rdfs:subClassOf nidm:AcquisitionMethod ; + "DynamicContrastEnhanced" . @@ -826,7 +867,8 @@ nidm:DynamicSusceptibilityContrast rdf:type owl:Class ; obo:IAO_0000114 obo:IAO_0000428 ; - rdfs:subClassOf nidm:AcquisitionMethod . + rdfs:subClassOf nidm:AcquisitionMethod ; + "DynamicSusceptibiltyContrast" . @@ -840,7 +882,8 @@ nidm:EchoPlanar rdf:type owl:Class ; obo:IAO_0000115 "Echo planar is a k-space traversal scheme used to acquire the k-space data in magnetic resonance imaging in which the entirety of k-space is continuously traversed for each repetition of the pulse sequence."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "EchoPlanar" . @@ -854,7 +897,8 @@ nidm:Electrocorticography rdf:type owl:Class ; rdfs:label "Electrocorticography"^^xsd:string ; - rdfs:subClassOf nidm:AcquisitionMethod . + rdfs:subClassOf nidm:AcquisitionMethod ; + "Electrocorticography" . @@ -868,7 +912,8 @@ nidm:Electrode rdf:type owl:Class ; obo:IAO_0000114 obo:IAO_0000428 ; - rdfs:subClassOf nidm:DataAcquisitionDevice . + rdfs:subClassOf nidm:DataAcquisitionDevice ; + "Electrode" . @@ -882,7 +927,8 @@ nidm:Electroencephalography rdf:type owl:Class ; rdfs:label "Electroencephalography"^^xsd:string ; - rdfs:subClassOf nidm:AcquisitionMethod . + rdfs:subClassOf nidm:AcquisitionMethod ; + "Electroencephalography" . @@ -896,7 +942,8 @@ nidm:ElectroencephalographyAcquisitionDevice rdf:type owl:Class ; rdfs:label "Electroencephalography Acquisition Device"^^xsd:string ; - rdfs:subClassOf nidm:DataAcquisitionDevice . + rdfs:subClassOf nidm:DataAcquisitionDevice ; + "ElectroencephalographyAcquisitionDevice" . @@ -910,7 +957,8 @@ nidm:ElectrophysiologyRecording rdf:type owl:Class ; obo:IAO_0000114 obo:IAO_0000428 ; - rdfs:subClassOf nidm:AcquisitionModality . + rdfs:subClassOf nidm:AcquisitionModality ; + "ElectrophysiologyRecording" . @@ -926,7 +974,8 @@ nidm:NIDM_0000153 rdf:type owl:Class ; obo:IAO_0000116 "Discussed at https://github.com/incf-nidash/nidm/issues/299"^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "Event-RelatedDesign". @@ -941,7 +990,8 @@ nidm:ExtracellularElectrophysiologyRecording rdf:type owl:Class ; obo:IAO_0000114 obo:IAO_0000428 ; - rdfs:subClassOf nidm:ElectrophysiologyRecording . + rdfs:subClassOf nidm:ElectrophysiologyRecording ; + "ExtracellularElectrophysiologyRecording" . @@ -955,7 +1005,8 @@ nidm:EyeTrackingDevice rdf:type owl:Class ; obo:IAO_0000114 obo:IAO_0000428 ; - rdfs:subClassOf nidm:DataAcquisitionDevice . + rdfs:subClassOf nidm:DataAcquisitionDevice ; + "EyeTrackingDevice" . @@ -969,7 +1020,8 @@ nidm:FieldPotential rdf:type owl:Class ; obo:IAO_0000114 obo:IAO_0000428 ; - rdfs:subClassOf nidm:AcquisitionMethod . + rdfs:subClassOf nidm:AcquisitionMethod ; + "FieldPotential" . @@ -983,7 +1035,8 @@ nidm:FlowWeighted rdf:type owl:Class ; obo:IAO_0000114 obo:IAO_0000428 ; - rdfs:subClassOf nidm:ImageContrastType . + rdfs:subClassOf nidm:ImageContrastType ; + "FlowWeighted" . @@ -997,7 +1050,8 @@ nidm:Functional rdf:type owl:Class ; obo:IAO_0000114 obo:IAO_0000428 ; - rdfs:subClassOf nidm:ImageUsageType . + rdfs:subClassOf nidm:ImageUsageType ; + "Functional" . @@ -1011,7 +1065,8 @@ nidm:Group rdf:type owl:Class ; obo:IAO_0000114 obo:IAO_0000428 ; - rdfs:subClassOf prov:Collection . + rdfs:subClassOf prov:Collection ; + "Group" . @@ -1025,7 +1080,8 @@ nidm:Gender rdf:type owl:Class ; obo:IAO_0000114 obo:IAO_0000428 ; - rdfs:subClassOf sio:SIO_000009 . + rdfs:subClassOf sio:SIO_000009 ; + "Gender" . @@ -1039,7 +1095,8 @@ nidm:HeartRateMonitor rdf:type owl:Class ; obo:IAO_0000114 obo:IAO_0000428 ; - rdfs:subClassOf nidm:DataAcquisitionDevice . + rdfs:subClassOf nidm:DataAcquisitionDevice ; + "HeartRateMonitor" . @@ -1053,7 +1110,8 @@ nidm:HighpassFilter rdf:type owl:Class ; obo:IAO_0000115 "A highpass filter is a device that removes or attenuates signal components below a selected frequency value from an electrical signal." ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "HighPassFilter" . @@ -1067,7 +1125,8 @@ nidm:ImageAcquisitionDevice rdf:type owl:Class ; obo:IAO_0000114 obo:IAO_0000428 ; - rdfs:subClassOf nidm:DataAcquisitionDevice . + rdfs:subClassOf nidm:DataAcquisitionDevice ; + "ImageAcquisitionDevice" . @@ -1081,7 +1140,8 @@ nidm:ImageContrastType rdf:type owl:Class ; obo:IAO_0000114 obo:IAO_0000428 ; - rdfs:subClassOf nidm:AcquisitionObjectQuality . + rdfs:subClassOf nidm:AcquisitionObjectQuality ; + "ImageContrastType" . @@ -1095,7 +1155,8 @@ nidm:ImageDataReconstruction rdf:type owl:Class ; obo:IAO_0000114 obo:IAO_0000428 ; - rdfs:subClassOf prov:Activity . + rdfs:subClassOf prov:Activity ; + "ImageDataReconstruction" . @@ -1111,7 +1172,8 @@ nidm:ImageUsageType rdf:type owl:Class ; rdfs:comment "Common image usage types in magnetic resonance imaging are anatomical and functional"^^xsd:string ; - rdfs:subClassOf nidm:AcquisitionObjectQuality . + rdfs:subClassOf nidm:AcquisitionObjectQuality ; + "ImageUsageType" . @@ -1125,7 +1187,8 @@ nidm:InformedConsentInstrument rdf:type owl:Class ; obo:IAO_0000114 obo:IAO_0000428 ; - rdfs:subClassOf nidm:InstrumentUsageType . + rdfs:subClassOf nidm:InstrumentUsageType ; + "InformedConsentInstrument" . @@ -1141,7 +1204,8 @@ nidm:InstrumentAdministrator rdf:type owl:Class ; obo:IAO_0000114 obo:IAO_0000428 ; - rdfs:subClassOf prov:Role . + rdfs:subClassOf prov:Role ; + "InstrumentAdministrator" . @@ -1157,7 +1221,8 @@ nidm:InstrumentUsageType rdf:type owl:Class ; rdfs:comment "Common instrument usage types are behavioral, clinical, and demographics, i.e., the instrument is used to record those types of data."^^xsd:string ; - rdfs:subClassOf nidm:AcquisitionObjectQuality . + rdfs:subClassOf nidm:AcquisitionObjectQuality ; + "InstrumentUsageType" . @@ -1171,7 +1236,8 @@ nidm:Inside-outSpiral rdf:type owl:Class ; obo:IAO_0000115 " Inside-out spiral is a k-space traversal scheme in which the path along which magnetic resonance imaging k-space data is acquired is in the shape of a spiral and the data at the center of k-space is acquired first."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "Inside-outSpiral". @@ -1185,7 +1251,8 @@ nidm:IntracellularElectrophysiologyRecording rdf:type owl:Class ; obo:IAO_0000115 "Intracellular Electrophysiology Recording is an activity in which electrical measurements of the interior cell environment are made."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "IntracellularElectrophysiologyRecording" . @@ -1199,7 +1266,8 @@ nidm:LowpassFilter rdf:type owl:Class ; obo:IAO_0000115 "A lowpass filter is a device that removes or attenuates signal components above a selected frequency value from an electrical signal." ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "LowPassFilter" . @@ -1213,7 +1281,8 @@ nidm:MagneticResonanceImaging rdf:type owl:Class ; obo:IAO_0000115 "Magnetic Resonance Imaging is an acquisition modality in which radiofrequency electromagnetic radiation is used to excite nuclei of the sample or subject and the characteristics of the detected signal are used to generate intensity contrast between different tissue types or structures."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "MagneticResonanceImaging" . @@ -1227,7 +1296,8 @@ nidm:MagneticResonanceImagingScanner rdf:type owl:Class ; obo:IAO_0000115 "A magnetic resonance imaging scanner is a data acquisition device that uses radiofrequency electromagnetic radiation to excite nuclei of a sample or subject and uses the characteristics of the detected signal are used to generate intensity contrast between different tissue types or structures."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "MagneticResonanceImagingScanner" . @@ -1241,7 +1311,8 @@ nidm:Magnetoencephalography rdf:type owl:Class ; obo:IAO_0000115 "Magnetoencephalography (MEG) is an acquisition modality in which the magnetic fields, resulting from electrical activity in the brain, are detected and used to elucidate the time course of brain electrical activity."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "Magnetoencephalography" . @@ -1255,7 +1326,8 @@ nidm:MagnetoencephalographyAcquisitionDevice rdf:type owl:Class ; rdfs:label "Magnetoencephalography Acquisition Device"^^xsd:string ; - rdfs:subClassOf nidm:DataAcquisitionDevice . + rdfs:subClassOf nidm:DataAcquisitionDevice ; + "MagnetoencephalographyAcquisitionDevice" . @@ -1271,7 +1343,8 @@ nidm:NIDM_0000154 rdf:type owl:Class ; obo:IAO_0000116 "Discussed at https://github.com/incf-nidash/nidm/issues/299"^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "MixedDesign" . @@ -1285,7 +1358,8 @@ nidm:ModelDesigner rdf:type owl:Class ; obo:IAO_0000115 "A model designer is a role for an agent who creates the model that describes an experiment" ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "ModelDesigner" . @@ -1299,7 +1373,8 @@ nidm:ModelSpecification rdf:type owl:Class ; obo:IAO_0000115 "Model specification is an activity in which the model designer creates the model that describes an experiment" ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "ModelSpecification" . @@ -1313,7 +1388,8 @@ nidm:MultielectrodeArray rdf:type owl:Class ; obo:IAO_0000114 obo:IAO_0000428 ; - rdfs:subClassOf nidm:DataAcquisitionDevice . + rdfs:subClassOf nidm:DataAcquisitionDevice ; + "MultielectrodeArray" . @@ -1327,7 +1403,8 @@ nidm:MultiUnitReccording rdf:type owl:Class ; obo:IAO_0000115 "Multi-unit recording is an extracellular electrophysiological acquisition method in which an acquisition object is gathered using multiple recording devices." ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "MultiUnitRecording" . @@ -1343,7 +1420,8 @@ nidm:NIDM_0000155 rdf:type owl:Class ; obo:IAO_0000115 "An fMRI design type is the type of stimulus presentation used in the data acquisition; one of block-based design, event-related design or mixed design."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "fMRIDesignType" . @@ -1359,7 +1437,8 @@ nidm:NuclearMagneticResonanceSpectroscopy rdf:type owl:Class ; rdfs:comment "The volume of interest may be selected either by the natural extent of the excited volume (e.g., surface coils) or by selecting for excitation, a thick slab through the use of magnetic field gradients."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "NuclearMagneticResonanceSpectroscopy" . @@ -1373,7 +1452,8 @@ nidm:NuclearMagneticResonanceSpectroscopicImaging rdf:type owl:Class ; obo:IAO_0000115 "Nuclear magnetic resonance spectroscopic imaging is an acquisition modality in which radiofrequency electromagnetic radiation is used to excite nuclei of the sample or subject, the characteristics of the detected signal are used to generate intensity contrast over a restricted (usually grid-like) area, and the resulting signal is displayed as a spectrum for each one of the spatially-resolved areas."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "NuclearMagneticResonanceSpectroscopyImaging" . @@ -1387,7 +1467,8 @@ nidm:Outside-inSpiral rdf:type owl:Class ; obo:IAO_0000115 "Outside-inSpiral is a k-space traversal scheme in which the path, along which magnetic resonance imaging k-space data is acquired, is spiral and the data further away from the center of k-space is acquired first."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "Outside-inSpiral" . @@ -1401,7 +1482,8 @@ nidm:ParallelImaging rdf:type owl:Class ; obo:IAO_0000115 "Parallel imaging is an acquisition method used in magnetic resonance imaging to acquire the k-space data in which multiple coils are employed and the signals from each coil are disambiguated using the coil sensitivity profile."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "ParallelImaging" . @@ -1415,7 +1497,8 @@ nidm:PatchClamp rdf:type owl:Class ; obo:IAO_0000115 "Patch clamp is an intracellular electrophysiological acquisiiton method in which a micropipette tip is brought near a cell and scution applied drawing a section of cell membrane into the tip in order that ion movement or the intracellular environment can be studied."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "PatchClamp" . @@ -1429,7 +1512,8 @@ nidm:PerformedPlan rdf:type owl:Class ; obo:IAO_0000115 "A performed plan is a plan that is actually implemented during an acquisition activity."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "PerformedPlan" . @@ -1443,7 +1527,8 @@ nidm:PositronEmissionTomography rdf:type owl:Class ; obo:IAO_0000115 "Positron emission tomography is an acquisition modality in which a positron-emitting radioactive tracer is introduced into the subject and the gamma rays emitted after a positron-electron collision are detected and their originating position calculated."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "PositronEmissionTomography" . @@ -1457,7 +1542,8 @@ nidm:PositronEmissionTomographyScanner rdf:type owl:Class ; obo:IAO_0000115 "A positron emission tomography scanner is a data-acquisition device that collects gamma rays emitted by a subject who is administered a positron-emitting radioactive substance and creates an image by calculating the originating position of the gamma rays."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "PositronEmissionTomographySCanner" . @@ -1471,7 +1557,8 @@ nidm:PresentationSoftware rdf:type owl:Class ; obo:IAO_0000115 "Presentation software is a software agent that provides the stimulus to the subject during a functional imaging (MRI, MEG, EEG) or behavioral data acquisition activity."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "PresentationSoftware" . @@ -1485,7 +1572,8 @@ nidm:PrincipalInvestigator rdf:type owl:Class ; obo:IAO_0000115 "A principal investigator is a role for a person who leads an activity during which data is acquired with a specific scientific purpose."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "PrincipalInvestigator" . @@ -1499,7 +1587,8 @@ nidm:ProcessedAcquisitionObject rdf:type owl:Class ; obo:IAO_0000115 "A processeded acquisition object is an acquisition object that has undergone an image reconstruction activity resulting in a matrix of values that when viewed form an image."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "ProcessedAcquisitionObject" . @@ -1513,7 +1602,8 @@ nidm:Project rdf:type owl:Class ; obo:IAO_0000115 "A project is a coordinated set of activities designed to generate data acquisition objects, with the ultimate goal of discovery or hypothesis testing."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "Project" . @@ -1527,7 +1617,8 @@ nidm:Protocol rdf:type owl:Class ; obo:IAO_0000115 "An protocol is a specified plan that contains information necessary to acquire the desired data during a session and the acquisition device parameters that are to be used in that acquisition."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "Protocol" . @@ -1541,7 +1632,8 @@ nidm:ProtonDensityWeighted rdf:type owl:Class ; obo:IAO_0000115 "Proton density weighted is a image contrast type in magnetic resonance imaging in which differences in voxel intensity reflect underlying differences in the number of protons in those voxels."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "ProtonDensityWeighted" . @@ -1555,7 +1647,8 @@ nidm:PulseSequence rdf:type owl:Class ; obo:IAO_0000115 "A pulse sequence is a collection of commands sent to the magnetic resonance imaging or nuclear magnetic resonance hardware to control the excitation of the subject or sample and the acquisition of data."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "PulseSequence" . @@ -1569,7 +1662,8 @@ nidm:RawAcquisitionObject rdf:type owl:Class ; obo:IAO_0000115 "A raw acquisition object is an acquisition object that has not yet undergone any further processing steps such asthe image reconstruction process."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "RawAcquisitionObject" . @@ -1583,7 +1677,8 @@ nidm:ReconstructedAcquisitionObject rdf:type owl:Class ; obo:IAO_0000115 "A reconstructed acquisition object is an acquisition object that has undergone an image reconstruction activity resulting in a matrix of values that when viewed form an image."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "ReconstructedAcquisitionObject" . @@ -1600,7 +1695,8 @@ nidm:Rectilinear rdf:type owl:Class ; rdfs:subClassOf nidm:k-spaceTraversalScheme ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "Rectilinear" . @@ -1614,7 +1710,8 @@ nidm:ResearchAssistant rdf:type owl:Class ; obo:IAO_0000115 "A research assistant is a role for a person who participates in laboratory- and study-related activities, but who is not leading the project in any fashion."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "ResearchAssistant" . @@ -1628,7 +1725,8 @@ nidm:RespirationRateMonitor rdf:type owl:Class ; obo:IAO_0000114 obo:IAO_0000428 ; - rdfs:subClassOf nidm:DataAcquisitionDevice . + rdfs:subClassOf nidm:DataAcquisitionDevice ; + "RespirationRateMonitor" . @@ -1646,7 +1744,8 @@ nidm:Series rdf:type owl:Class ; rdfs:comment "During a MRI session, for example, T1-weighted and resting-state data were acquired. Both the T1-weighted and resting state data are Acquisition Objects and the activity during which they were acquired is the Session. The Series is the activity that led to the production of each Acquisition Object." ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "Series" . @@ -1664,7 +1763,8 @@ nidm:Session rdf:type owl:Class ; provone:isPartOf nidm:Project ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "Session" . @@ -1682,7 +1782,8 @@ nidm:SessionObject rdf:type owl:Class ; obo:IAO_0000115 "A session object is an entity that represents one or more acquisitions that take place during the same temporal epoch (session)."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "SessionObject" . @@ -1696,7 +1797,8 @@ nidm:SharpElectrode rdf:type owl:Class ; obo:IAO_0000115 "Sharp electrode is intracellular electrophysiological acquisition method used for measuring the potential of the intracellular environment with minimal disturbance of that environment, in which a pipette, filled with electrolyte and with a very small opening, is inserted into the cell and the potential measured."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "SharpElectrode" . @@ -1710,7 +1812,8 @@ nidm:SignalFilter rdf:type owl:Class ; obo:IAO_0000115 "A signal filter is a device that modifies or removes certain components of an electrical signal." ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "SignalFilter" . @@ -1724,7 +1827,8 @@ nidm:SignalGenerator rdf:type owl:Class ; obo:IAO_0000115 "A signal generator is a device that supplies an electrical voltage signal of a specified amplitude and shape." ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "SignalGenerator" . @@ -1738,7 +1842,8 @@ nidm:SimultaneousMultisliceMethod rdf:type owl:Class ; obo:IAO_0000115 "Simultaneous multislice is an acquisition method in magnetic resonance imaging used to acquire the k-space in which data from multiple slices are acquired at the same time and the coil sensitivity profiles are used to separate the data from each slice."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000125 . + obo:IAO_0000114 obo:IAO_0000125 ; + "SimultaneousMultisliceMethod" . @@ -1752,7 +1857,8 @@ nidm:SinglePhotonEmissionComputedTomography rdf:type owl:Class ; obo:IAO_0000115 "Single-photon emission computed tomography (SPECT)is an acquisition modality in which a gamma-ray-emitting radioisotope is introduced into the subject and the gamma rays emitted are detected in a series of two-dimensional images around the patient, enabling a three-dimensional volume to be reconstructed using a tomographic reconstruction method."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "SinglePhotonEmissionComputedTomography" . @@ -1766,7 +1872,8 @@ nidm:SinglePhotonEmissionComputedTomographyScanner rdf:type owl:Class ; obo:IAO_0000115 "A single-photon emission computed tomography (SPECT)scanner is an acquisition device that collects gamma-rays emitted by a subject in a series of two-dimensional images around the patient, enabling a three-dimensional volume to be reconstructed using a tomographic reconstruction method."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "SinglePhotonEmissionComputedTomographyScanner" . @@ -1780,7 +1887,8 @@ nidm:SingleUnitReccording rdf:type owl:Class ; obo:IAO_0000115 "Single-unit recording is an extracellular electrophysiological acquisition method, in which a thin electrode is introduced into the extracellular space of a sample or subject and the action potential from a single neuron is recorded."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000125 . + obo:IAO_0000114 obo:IAO_0000125 ; + "SingleUnitReccording" . @@ -1796,8 +1904,8 @@ nidm:SpecifiedPlan rdf:type owl:Class ; rdfs:comment "Note that this is related to nidm:PerformedPlan, which is the plan that is actually carried out." ; - obo:IAO_0000114 obo:IAO_0000428 . - + obo:IAO_0000114 obo:IAO_0000428 ; + "SpecifiedPlan" . ### http://purl.org/nidash/nidm#StimulusGenerator @@ -1810,7 +1918,8 @@ nidm:StimulusGenerator rdf:type owl:Class ; obo:IAO_0000115 "A stimulus generator is a device that can deliver a current or voltage waveform that is used to stimulate a sample, cell, or body part." ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "StimulusGenerator" . @@ -1824,7 +1933,8 @@ nidm:StimulusIsolator rdf:type owl:Class ; obo:IAO_0000115 "A stimulus isolatator is a device that can deliver a current or voltage waveform that is used to stimulate a sample, cell, or body part, but is isolated from electrical ground, which both decreases the stimulus artifact in the acquired signal and increases the safety for the user." ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "StimulusIsolator" . @@ -1838,7 +1948,8 @@ nidm:QuantitativeSusceptibilityMapping rdf:type owl:Class ; obo:IAO_0000115 "Quantitative susceptibility mapping is a magentic resonance imaging image-usage type in which differences in voxel intensity reflect quantitative differences magnetic susceptibilty of the underlying sample."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "QuantitativeSusceptibilityMapping" . @@ -1852,7 +1963,8 @@ nidm:StimulusPresentationFile rdf:type owl:Class ; obo:IAO_0000115 "A stimulus presentation file is an auxiliary files that contains the presentation timing and/or location of the experimental stimulus (e.g., words, pictures) that are shown to the subject in a task-based assessment activity."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "StimulusPresentationFile" . @@ -1866,7 +1978,8 @@ nidm:StimulusResponseFile rdf:type owl:Class ; obo:IAO_0000115 "A stimulus response file is an auxiliary file that contains the recorded response of the subject to an experimental stimulus the course of a task-based assessment activity."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "StimulusResponseFile" . @@ -1880,7 +1993,8 @@ nidm:Structural rdf:type owl:Class ; obo:IAO_0000115 "A stimulus response file is an auxiliary file that contains the recorded response of the subject to an experimental stimulus the course of a task-based assessment activity."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "Structural" . @@ -1894,7 +2008,8 @@ nidm:Subject rdf:type owl:Class ; obo:IAO_0000115 "A subject is a role for an agent (either living or non-living) which is characterized by being the object of study in an acquisition activity."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "Subject" . @@ -1909,7 +2024,8 @@ nidm:SusceptibilityWeighted rdf:type owl:Class ; obo:IAO_0000115 "Susceptibility weighted is a magentic resonance imaging image-contrast type in which differences in voxel intensity reflect differences in magnetic susceptibilty of the underlying sample."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "SusceptibilityWeighted" . @@ -1923,7 +2039,8 @@ nidm:SusceptibilityWeightedImaging rdf:type owl:Class ; obo:IAO_0000115 "Susceptibility weighted imaging is a magentic resonance imaging image-usage type in which differences in voxel intensity reflect differences in magnetic susceptibilty of the underlying sample, but are not caculated values."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "SusceptibilityWeightedImaging" . @@ -1937,7 +2054,8 @@ nidm:T1Weighted rdf:type owl:Class ; obo:IAO_0000115 "T1 weighted is an image contrast type in which differences in voxel intensity reflect differences in the spin-lattice relaxation time of the probe in the underlying sample."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "T1Weighted" . @@ -1951,7 +2069,8 @@ nidm:T2StarWeighted rdf:type owl:Class ; obo:IAO_0000115 "T2-star weighted is an image contrast type in which differences in voxel intensity reflect differences in the spin-spin relaxation time of the probe as well as the field inhomogeneities in the underlying sample."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "T2StarWeighted" . @@ -1965,7 +2084,8 @@ nidm:T2Weighted rdf:type owl:Class ; obo:IAO_0000115 "T2 weighted is an image contrast type in which differences in voxel intensity reflect differences in the spin-spin relaxation time of the probe in the underlying sample."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "T2Weighted" . @@ -1979,7 +2099,8 @@ nidm:Task rdf:type owl:Class ; obo:IAO_0000115 "A task is an activity that is performed by a subject to elucidate some aspect of human behavior or underlying process."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "Task" . @@ -1993,7 +2114,8 @@ nidm:VoltageAmplifier rdf:type owl:Class ; obo:IAO_0000115 "A voltage amplifier is a device that increases the electrical voltage amplitude of an input electrical signal by a fixed amount, while keeping the current constant." ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "VoltageAmplifier" . @@ -2007,7 +2129,8 @@ nidm:VoltageClamp rdf:type owl:Class ; obo:IAO_0000115 "Voltage clamp is an intracellular electrophysiological acquisition method in in which the cell membrane potential is fixed to a set value and the ionic current that crosses the cell membrane at that potential is measured."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "VoltageClamp" . @@ -2023,7 +2146,8 @@ nidm:X-rayComputedTomography rdf:type owl:Class ; obo:IAO_0000115 "X-ray Computed tomography is an acquisition modality in which an x-ray beam is scanned across a subject and the resulting data is reconstructed into two-dimensional slices or a three-dimensional volume in which the contrast is generated by the differential absorption of x-rays." ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "X-rayComputedTomography" . @@ -2037,7 +2161,8 @@ nidm:b-ValueFile rdf:type owl:Class ; obo:IAO_0000115 "A b-value file is an auxiliary file, used in a diffusion-weighted magnetic resonance imaging acquisition activity, that contains the b-values used to control the diffusion-sensitization weighting."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "b-ValueFile" . @@ -2051,7 +2176,8 @@ nidm:b-VectorFile rdf:type owl:Class ; obo:IAO_0000115 "A b-vector file is an auxiliary file, used in a diffusion-weighted magnetic resonance imaging acquisition activity, that contains the direction vectors used to control the direction of the diffusion-sensitization weighting."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "b-VectorFile" . @@ -2065,13 +2191,15 @@ nidm:k-spaceTraversalScheme rdf:type owl:Class ; obo:IAO_0000115 "The k-space traversal scheme is an acquisition object quality that describes, in a magnetic resonance imaging acquisition, the path in k-space along which the signal is acquired."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "k-spaceTraversalScheme" . ### http://semanticscience.org/resource/SIO_000004 sio:SIO_000004 rdfs:subClassOf prov:Entity . + @@ -2081,12 +2209,14 @@ sio:SIO_000015 rdfs:subClassOf prov:Entity . + ### http://semanticscience.org/resource/SIO_000614 sio:SIO_000614 rdfs:subClassOf prov:Entity . + ### http://semanticscience.org/resource/SIO_001000 sio:SIO_001000 rdfs:subClassOf nidm:Project . @@ -2125,43 +2255,50 @@ obo:PATO_0000001 rdfs:subClassOf sio:SIO_000614 . ### http://www.owl-ontologies.com/Ontology1298855822.owl#Ex_vivo_subject -qibo:Ex_vivo_subject rdfs:subClassOf nidm:Subject . +qibo:Ex_vivo_subject rdfs:subClassOf nidm:Subject ; + "Ex_vivo_subject" . ### http://www.owl-ontologies.com/Ontology1298855822.owl#In_vitro_subject -qibo:In_vitro_subject rdfs:subClassOf nidm:Subject . +qibo:In_vitro_subject rdfs:subClassOf nidm:Subject ; + "In_vitro_subject" . ### http://www.owl-ontologies.com/Ontology1298855822.owl#In_vivo_subject -qibo:In_vivo_subject rdfs:subClassOf nidm:Subject . +qibo:In_vivo_subject rdfs:subClassOf nidm:Subject ; + "In_vivo_subject" . ### http://www.owl-ontologies.com/Ontology1298855822.owl#Phantom_experimental_subject -qibo:Phantom_experimental_subject rdfs:subClassOf nidm:Subject . +qibo:Phantom_experimental_subject rdfs:subClassOf nidm:Subject ; + "Phantom_experimental_subject" . ### http://www.w3.org/ns/prov#Activity -prov:Activity rdf:type owl:Class . +prov:Activity rdf:type owl:Class ; + "Activity" . ### http://www.w3.org/ns/prov#Agent -prov:Agent rdf:type owl:Class . +prov:Agent rdf:type owl:Class ; + "Agent" . ### http://www.w3.org/ns/prov#Collection -prov:Collection rdf:type owl:Class . +prov:Collection rdf:type owl:Class ; + "Collection" . @@ -2169,19 +2306,22 @@ prov:Collection rdf:type owl:Class . prov:Entity rdf:type owl:Class ; - rdfs:label "Entity"^^xsd:string . + rdfs:label "Entity"^^xsd:string ; + "Entity" . ### http://www.w3.org/ns/prov#Plan -prov:Plan rdfs:subClassOf sio:SIO_000091 . +prov:Plan rdfs:subClassOf sio:SIO_000091 ; + "Plan" . ### http://www.w3.org/ns/prov#Role -prov:Role rdf:type owl:Class . +prov:Role rdf:type owl:Class ; + "Role" . @@ -2189,7 +2329,8 @@ prov:Role rdf:type owl:Class . prov:SoftwareAgent rdf:type owl:Class ; - rdfs:subClassOf prov:Agent . + rdfs:subClassOf prov:Agent ; + "SoftwareAgent" . @@ -2205,7 +2346,8 @@ obo:OBI_0400107 rdf:type owl:Class ; onli:assessment-instrument rdf:type owl:Class ; - rdfs:subClassOf nidm:AcquisitionObject . + rdfs:subClassOf nidm:AcquisitionObject ; + "assessment-instrument" . @@ -2213,7 +2355,8 @@ onli:assessment-instrument rdf:type owl:Class ; onli:instrument-based-assessment rdf:type owl:Class ; - rdfs:subClassOf nidm:Acquisition . + rdfs:subClassOf nidm:Acquisition ; + "instrument-based-assessment" . @@ -2221,7 +2364,8 @@ onli:instrument-based-assessment rdf:type owl:Class ; onli:instrument-variable rdf:type owl:Class ; - rdfs:subClassOf nidm:AcquisitionObject . + rdfs:subClassOf nidm:AcquisitionObject ; + "instrument-variable" . @@ -2229,31 +2373,36 @@ onli:instrument-variable rdf:type owl:Class ; onli:scale rdf:type owl:Class ; - rdfs:subClassOf sio:SIO_000078 . + rdfs:subClassOf sio:SIO_000078 ; + "scale" . ### http://neurolog.unice.fr/ontoneurolog/v3.0/instrument.owl#variable-assessment -onli:variable-assessment rdfs:subClassOf nidm:Acquisition . +onli:variable-assessment rdfs:subClassOf nidm:Acquisition ; + "variable-assessment" . ### http://neurolog.unice.fr/ontoneurolog/v3.0/instrument.owl#score -onli:score rdfs:subClassOf sio:SIO_000366 . +onli:score rdfs:subClassOf sio:SIO_000366 ; + "score" . ### http://neurolog.unice.fr/ontoneurolog/v3.0/instrument.owl#scale-item -onli:scale-item rdfs:subClassOf sio:SIO_000366 . +onli:scale-item rdfs:subClassOf sio:SIO_000366 ; + "scale-item" . ### http://purl.org/dc/dcmitype/Image - rdfs:subClassOf nidm:ReconstructedAcquisitionObject . + rdfs:subClassOf nidm:ReconstructedAcquisitionObject ; + "Image" . @@ -2273,174 +2422,199 @@ obo:IAO_0000136 rdf:type owl:NamedIndividual , ### http://purl.org/nidash/nidm#BarnesAkathisiaScale nidm:BarnesAkathisiaScale rdf:type owl:NamedIndividual , - onli:assessment-instrument . + onli:assessment-instrument ; + "BarnesAkathisiaScale" . ### http://purl.org/nidash/nidm#CalgaryDepressionScale nidm:CalgaryDepressionScale rdf:type owl:NamedIndividual , - onli:assessment-instrument . + onli:assessment-instrument ; + "CalgaryDepressionScale" . ### http://purl.org/nidash/nidm#CategoryFluencyTest nidm:CategoryFluencyTest rdf:type owl:NamedIndividual , - onli:assessment-instrument . + onli:assessment-instrument ; + "CategoryFluencyTest" . ### http://purl.org/nidash/nidm#ClinicalGlobalImpression nidm:ClinicalGlobalImpression rdf:type owl:NamedIndividual , - onli:assessment-instrument . + onli:assessment-instrument ; + "ClinicalGlobalImpression" . ### http://purl.org/nidash/nidm#ContinuousPerformanceTest nidm:ContinuousPerformanceTest rdf:type owl:NamedIndividual , - onli:assessment-instrument . + onli:assessment-instrument ; + " ContinuousPerformanceTest" . ### http://purl.org/nidash/nidm#DelaySemanticVerbalLearningTest nidm:DelaySemanticVerbalLearningTest rdf:type owl:NamedIndividual , - onli:assessment-instrument . + onli:assessment-instrument ; + "DelaySemanticVerbalLearningTest" . ### http://purl.org/nidash/nidm#DelayVisualFiguralLearningTest nidm:DelayVisualFiguralLearningTest rdf:type owl:NamedIndividual , - onli:assessment-instrument . + onli:assessment-instrument ; + "DelayVisualFiguralLearningTest" . ### http://purl.org/nidash/nidm#EdinburghHandnessTest nidm:EdinburghHandnessTest rdf:type owl:NamedIndividual , - onli:assessment-instrument . + onli:assessment-instrument ; + "EdinburghHandnessTest" . ### http://purl.org/nidash/nidm#FacialEmotionDiscriminationTest nidm:FacialEmotionDiscriminationTest rdf:type owl:NamedIndividual , - onli:assessment-instrument . + onli:assessment-instrument ; + "FacialEmotionDiscriminationTest" . ### http://purl.org/nidash/nidm#FagerstromTestForNicotineDependence nidm:FagerstromTestForNicotineDependence rdf:type owl:NamedIndividual , - onli:assessment-instrument . + onli:assessment-instrument ; + "FagerstromTestForNicotineDependence" . ### http://purl.org/nidash/nidm#FingerTappingTest nidm:FingerTappingTest rdf:type owl:NamedIndividual , - onli:assessment-instrument . + onli:assessment-instrument ; + "FingerTappingTest" . ### http://purl.org/nidash/nidm#LetterFluencyTest nidm:LetterFluencyTest rdf:type owl:NamedIndividual , - onli:assessment-instrument . + onli:assessment-instrument ; + "LetterFluencyTest" . ### http://purl.org/nidash/nidm#LetterNumberSpanTest nidm:LetterNumberSpanTest rdf:type owl:NamedIndividual , - onli:assessment-instrument . + onli:assessment-instrument ; + "LetterNumberSpanTest" . ### http://purl.org/nidash/nidm#MazeSolvingTest nidm:MazeSolvingTest rdf:type owl:NamedIndividual , - onli:assessment-instrument . + onli:assessment-instrument ; + "MazeSolvingTest" . ### http://purl.org/nidash/nidm#NorthAmericanAdultReadingTest nidm:NorthAmericanAdultReadingTest rdf:type owl:NamedIndividual , - onli:assessment-instrument . + onli:assessment-instrument ; + "NorthAmericanAdultReadingTest" . ### http://purl.org/nidash/nidm#PositiveAndNegativeSyndromeScale nidm:PositiveAndNegativeSyndromeScale rdf:type owl:NamedIndividual , - onli:assessment-instrument . + onli:assessment-instrument ; + "PositiveAndNegativeSyndromeScale" . ### http://purl.org/nidash/nidm#PremorbidAdjustment nidm:PremorbidAdjustment rdf:type owl:NamedIndividual , - onli:assessment-instrument . + onli:assessment-instrument ; + "PremorbidAdjustment" . ### http://purl.org/nidash/nidm#SimpsonAngusRatingScale nidm:SimpsonAngusRatingScale rdf:type owl:NamedIndividual , - onli:assessment-instrument . + onli:assessment-instrument ; + "SimpsonAngusRatingScale" . ### http://purl.org/nidash/nidm#SocioeconomicScale nidm:SocioeconomicScale rdf:type owl:NamedIndividual , - onli:assessment-instrument . + onli:assessment-instrument ; + "SocioeconomicScale" . ### http://purl.org/nidash/nidm#SpatialMemorySpanTest nidm:SpatialMemorySpanTest rdf:type owl:NamedIndividual , - onli:assessment-instrument . + onli:assessment-instrument ; + "SpatialMemorySpanTest" . ### http://purl.org/nidash/nidm#StroopTest nidm:StroopTest rdf:type owl:NamedIndividual , - onli:assessment-instrument . + onli:assessment-instrument ; + "StroopTest" . ### http://purl.org/nidash/nidm#SymbolDigitAssociationTest nidm:SymbolDigitAssociationTest rdf:type owl:NamedIndividual , - onli:assessment-instrument . + onli:assessment-instrument ; + "SymbolDigitAssociationTest" . ### http://purl.org/nidash/nidm#TrailsA nidm:TrailsA rdf:type owl:NamedIndividual , - onli:assessment-instrument . + onli:assessment-instrument ; + "TrailsA" . ### http://purl.org/nidash/nidm#TrailsB nidm:TrailsB rdf:type owl:NamedIndividual , - onli:assessment-instrument . + onli:assessment-instrument ; + "TrailsB" . ### http://purl.org/nidash/nidm#WisconsinCardSortingTest nidm:WisconsinCardSortingTest rdf:type owl:NamedIndividual , - onli:assessment-instrument . + onli:assessment-instrument ; + "WisconsinCardSortingTest" . @@ -2458,7 +2632,8 @@ nidm:BarnesAkathisiaScale rdfs:label "Barnes Akathisia Scale"^^xsd:string ; dct:source "https://en.m.wikipedia.org/wiki/Barnes_Akathisia_Scale"^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "Barnes_Akathisia_Scale" . @@ -2469,7 +2644,8 @@ nidm:CalgaryDepressionScale rdfs:label "Calgary Depression Scale"^^xsd:string ; obo:IAO_0000115 "The Calgary Depression Scale is an assessment instrument consisting of a series of questions specifically developed to assess the level of depression in schizophrenia."^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "CalgaryDepressionScale" . @@ -2481,7 +2657,8 @@ nidm:CategoryFluencyTest rdfs:label "Category Fluency Test"^^xsd:string ; rdfs:comment "This test is also know as: Category Instances, Category Naming, Semantic Fluency" ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "CategoryFluencyTest" . @@ -2493,7 +2670,8 @@ nidm:ClinicalGlobalImpression rdfs:label "Clinical Global Impression"^^xsd:strin rdfs:comment "Which scale is this? There are three scales: Severity, Improvement, and Efficacy" ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "ClinicalGlobalImpression" . @@ -2503,7 +2681,8 @@ nidm:ContinuousPerformanceTest rdfs:label "Continuous Performance Test"^^xsd:str dct:source "wikipedia"^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "ContinuousPerformanceTest" . @@ -2515,7 +2694,8 @@ nidm:DelaySemanticLearningTest rdfs:label "Delay Semantic Learning Test"^^xsd:st dct:source "http://neurocomp.com/projects/cminds/FBIRNStudy/"^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "DelaySemanticLearningTest" . @@ -2527,7 +2707,8 @@ nidm:DelayVisualFiguralLearningTest rdfs:label "Delay Visual Figural Learning Te rdfs:comment "The Delay SVFT is performed after an initial performance of the Visual Figural Learning Test and a delay period of specified duration." ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "DelayVisualFiguralLearningTest" . @@ -2537,7 +2718,8 @@ nidm:EdinburghHandednessInventory rdfs:label "Edinburgh Handedness Inventory"^^x dct:source "http://neurocomp.com/projects/cminds/FBIRNStudy/"^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "EdinburghHandednessInventory" . @@ -2547,7 +2729,8 @@ nidm:FacialEmotionDiscriminationTest rdfs:label "Facial Emotion Discrimination T dct:source "http://neurocomp.com/projects/cminds/FBIRNStudy/"^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "FacialEmotionDiscriminationTest" . @@ -2557,7 +2740,8 @@ nidm:FagerstromTestForNicotineDependence rdfs:label "Fagerstrom Test for Nicotin dct:source "https://cde.drugabuse.gov/instrument/d7c0b0f5-b865-e4de-e040-bb89ad43202b accessed: 20161128"^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + " FagerstromTestForNicotineDependence" . @@ -2567,7 +2751,8 @@ nidm:FingerTappingTest rdfs:label "Finger Tapping Test" ; dct:source "http://neurocomp.com/projects/cminds/FBIRNStudy/"^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "FingerTappingTest" . @@ -2577,7 +2762,8 @@ nidm:LetterFluencyTest rdfs:label "Letter Fluency Test"^^xsd:string ; dct:source "http://neurocomp.com/projects/cminds/FBIRNStudy/"^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "LetterFluencyTest" . @@ -2587,7 +2773,8 @@ nidm:LetterNumberSpanTest rdfs:label "Letter Number Span Test" ; dct:source "http://neurocomp.com/projects/cminds/FBIRNStudy/"^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "LetterNumberSpanTest" . @@ -2597,7 +2784,8 @@ nidm:MazeSolvingTest rdfs:label "Maze Solving Test" ; dct:source "http://neurocomp.com/projects/cminds/FBIRNStudy/"^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "MazeSolvingTest" . @@ -2607,7 +2795,8 @@ nidm:NorthAmericanAdultReadingTest rdfs:label "North American Reading Test"^^xsd dct:source "http://neurocomp.com/projects/cminds/FBIRNStudy/"^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "NorthAmericanAdultReadingTest" . @@ -2617,7 +2806,8 @@ nidm:PositiveAndNegativeSyndromeScale rdfs:label "Positive and Negative Syndrome dct:source "http://schizophreniabulletin.oxfordjournals.org/content/13/2/261.full.pdf+html"^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "PositiveAndNegativeSyndromeScale" . @@ -2627,7 +2817,8 @@ nidm:PremorbidAdjustment rdfs:label "Premorbid Adjustment Scale" ; dct:source "http://schizophreniabulletin.oxfordjournals.org/content/8/3/470.abstract"^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "PremorbidAdjustmentScale" . @@ -2639,7 +2830,8 @@ nidm:SimpsonAngusRatingScale rdfs:label "Simpson Angus Rating Scale" ; dct:source "wikipedia"^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "SimpsonAngusRatingScale" . @@ -2649,7 +2841,8 @@ nidm:SocioeconomicStatus rdfs:label "SocioeconomicStatus"^^xsd:string ; dct:source "wikipedia"^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "SocioeconomicStatus" . @@ -2661,7 +2854,8 @@ nidm:SpatialMemorySpan rdfs:label "Spatial Memory Span" ; dct:source "fBIRN CMINDS document - not in the online version through"^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "SpatialMemorySpan" . @@ -2671,7 +2865,8 @@ nidm:StroopTest rdfs:label "Stroop Test" ; dct:source "http://neurocomp.com/projects/cminds/FBIRNStudy/"^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "StroopTest" . @@ -2681,7 +2876,8 @@ nidm:SymbolDigitAssociationTest rdfs:label "Symbol Digit Association Test" ; dct:source "http://neurocomp.com/projects/cminds/FBIRNStudy/"^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "SymbolDigitAssociationTest" . @@ -2691,7 +2887,8 @@ nidm:TrailsA rdfs:label "Trails A" ; dct:source "http://neurocomp.com/projects/cminds/FBIRNStudy/"^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "TrailsA" . @@ -2701,7 +2898,8 @@ nidm:TrailsB rdfs:label "Trails B" ; dct:source "http://neurocomp.com/projects/cminds/FBIRNStudy/"^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "TrailsB" . @@ -2711,7 +2909,8 @@ nidm:WisconsinCardSortingTest rdfs:label "Wisconsin Card Sorting Test" ; dct:source "http://neurocomp.com/projects/cminds/FBIRNStudy/"^^xsd:string ; - obo:IAO_0000114 obo:IAO_0000428 . + obo:IAO_0000114 obo:IAO_0000428 ; + "WisconsinCardSortingTest" . diff --git a/nidm/nidm-experiment/terms/nidme.json b/nidm/nidm-experiment/terms/nidme.json new file mode 100644 index 000000000..98f88a2b7 --- /dev/null +++ b/nidm/nidm-experiment/terms/nidme.json @@ -0,0 +1,285 @@ +{ + "@context": { + "@version": 1.1, + "records": { + "@id": "@graph", + "@container": "@type" + }, + "xsd": "http://www.w3.org/2001/XMLSchema#", + "prov": "http://www.w3.org/ns/prov#", + "agent": "http://www.w3.org/ns/prov#agent", + "entity": "http://www.w3.org/ns/prov#entity", + "activity": "http://www.w3.org/ns/prov#activity", + "hadPlan": "http://www.w3.org/ns/prov#hadPlan", + "hadRole": "http://www.w3.org/ns/prov#hadRole", + "wasAttributedTo": "http://www.w3.org/ns/prov#wasAttributedTo", + "association": "http://www.w3.org/ns/prov#association", + "usage": "http://www.w3.org/ns/prov#usage", + "generation": "http://www.w3.org/ns/prov#generation", + "startedAtTime": { + "@id": "http://www.w3.org/ns/prov#startedAtTime", + "@type": "http://www.w3.org/2001/XMLSchema#dateTime" + }, + "endedAtTime": { + "@id": "http://www.w3.org/ns/prov#endedAtTime", + "@type": "http://www.w3.org/2001/XMLSchema#dateTime" + }, + "nidm": "http://purl.org/nidash/nidm#", + "niiri": "http://iri.nidash.org/", + "afni": "http://purl.org/nidash/afni#", + "spm": "http://purl.org/nidash/spm#", + "fsl": "http://purl.org/nidash/fsl#", + "freesurfer": "https://surfer.nmr.mgh.harvard.edu/", + "ants": "http://stnava.github.io/ANTs/", + "rdfs": "http://www.w3.org/2000/01/rdf-schema#", + "crypto": "http://id.loc.gov/vocabulary/preservation/cryptographicHashFunctions#", + "dct": "http://purl.org/dc/terms/", + "obo": "http://purl.obolibrary.org/obo/", + "nfo": "http://www.semanticdesktop.org/ontologies/2007/03/22/nfo#", + "dc": "http://purl.org/dc/elements/1.1/", + "nlx": "http://uri.neuinfo.org/nif/nifstd/", + "scr": "http://scicrunch.org/resolver/", + "foaf": "http://xmlns.com/foaf/0.1/", + "vc": "http://www.w3.org/2006/vcard/ns#", + "dicom": "http://neurolex.org/wiki/Category:DICOM_term/", + "dctypes": "http://purl.org/dc/dcmitype/", + "ncit": "http://ncitt.ncit.nih.gov/", + "dcat": "http://www.w3.org/ns/dcat#", + "birnlex": "http://bioontology.org/projects/ontologies/birnlex/", + "ndar": "https://ndar.nih.gov/api/datadictionary/v2/dataelement/", + "ncicb": "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#", + "sio": "http://semanticscience.org/ontology/sio.owl#", + "bids": "http://bids.neuroimaging.io/", + "owl": "http://www.w3.org/2002/07/owl#", + "onli": "http://neurolog.unice.fr/ontoneurolog/v3.0/instrument.owl#", + "pato": "http://purl.obolibrary.org/obo/pato#", + "skos": "http://www.w3.org/2004/02/skos/core#", + "Project": "http://purl.org/nidash/nidm#Project", + "Identifier": "http://semanticscience.org/ontology/sio.owl#Identifier", + "title": "http://purl.org/dc/terms/title", + "description": "http://purl.org/dc/terms/description", + "license": "http://purl.org/dc/terms/license", + "URL": "http://semanticscience.org/ontology/sio.owl#URL", + "creator": "http://www.w3.org/ns/dcat#creator", + "author": "http://www.w3.org/ns/dcat#author", + "Session": "http://purl.org/nidash/nidm#Session", + "Acquisition": "http://purl.org/nidash/nidm#Acquisition", + "hadAcquisitionModality": "http://purl.org/nidash/nidm#hadAcquisitionModality", + "instrument-based-assessment": "http://neurolog.unice.fr/ontoneurolog/v3.0/instrument.owl#instrument-based-assessment", + "AcquisitionObject": "http://purl.org/nidash/nidm#AcquisitionObject", + "DemographicsInstrument": "http://purl.org/nidash/nidm#DemographicsInstrument", + "assessment-instrument": "http://neurolog.unice.fr/ontoneurolog/v3.0/instrument.owl#assessment-instrument", + "filename": "http://www.semanticdesktop.org/ontologies/2007/03/22/nfo#filename", + "file": "http://semanticscience.org/ontology/sio.owl#file", + "birnlex_2152": "http://bioontology.org/projects/ontologies/birnlex/birnlex_2152", + "birnlex_2199": "http://bioontology.org/projects/ontologies/birnlex/birnlex_2199", + "Subject": "http://purl.org/nidash/nidm#Subject", + "Age": "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#Age", + "gender": "https://ndar.nih.gov/api/datadictionary/v2/dataelement/gender", + "PhenotypicSex": "http://purl.obolibrary.org/obo/pato#PhenotypicSex", + "handedness": "http://purl.obolibrary.org/obo/handedness", + "race": "http://semanticscience.org/ontology/sio.owl#race", + "ethnicity": "http://semanticscience.org/ontology/sio.owl#ethnicity", + "Diagnosis": "http://ncitt.ncit.nih.gov/Diagnosis", + "familyName": "http://xmlns.com/foaf/0.1/familyName", + "givenName": "http://xmlns.com/foaf/0.1/givenName", + "src_subject_id": "https://ndar.nih.gov/api/datadictionary/v2/dataelement/src_subject_id", + "hadImageContrastType": "http://purl.org/nidash/nidm#hadImageContrastType", + "hadImageUsageType": "http://purl.org/nidash/nidm#hadImageUsageType", + "MagneticResonanceImaging": "http://purl.org/nidash/nidm#MagneticResonanceImaging", + "Anatomical": "http://purl.org/nidash/nidm#Anatomical", + "Structural": "http://purl.org/nidash/nidm#Structural", + "Functional": "http://purl.org/nidash/nidm#Functional", + "DiffusionWeighted": "http://purl.org/nidash/nidm#DiffusionWeighted", + "b-value": "http://purl.org/nidash/nidm#b-value", + "b-vector": "http://purl.org/nidash/nidm#b-vector", + "Task": "http://purl.org/nidash/nidm#Task", + "T1Weighted": "http://purl.org/nidash/nidm#T1Weighted", + "T2Weighted": "http://purl.org/nidash/nidm#T2Weighted", + "T2StarWeighted": "http://purl.org/nidash/nidm#T2StarWeighted", + "DiffusionTensor": "http://purl.org/nidash/nidm#DiffusionTensor", + "FlowWeighted": "http://purl.org/nidash/nidm#FlowWeighted", + "StimulusResponseFile": "http://purl.org/nidash/nidm#StimulusResponseFile", + "xsi": "http://www.w3.org/2001/XMLSchema-instance", + "xml": "http://www.w3.org/XML/1998/namespace", + "rdf": "http://www.w3.org/1999/02/22-rdf-syntax-ns#", + "instrument-variable": "http://neurolog.unice.fr/ontoneurolog/v3.0/instrument.owl#instrument-variable", + "scale": "http://neurolog.unice.fr/ontoneurolog/v3.0/instrument.owl#scale", + "scale-item": "http://neurolog.unice.fr/ontoneurolog/v3.0/instrument.owl#scale-item", + "score": "http://neurolog.unice.fr/ontoneurolog/v3.0/instrument.owl#score", + "variable-assessment": "http://neurolog.unice.fr/ontoneurolog/v3.0/instrument.owl#variable-assessment", + "Image": "http://purl.org/dc/dcmitype/Image", + "source": "http://purl.org/dc/terms/source", + "AcquisitionDeviceOperator": "http://purl.org/nidash/nidm#AcquisitionDeviceOperator", + "AcquisitionMethod": "http://purl.org/nidash/nidm#AcquisitionMethod", + "AcquisitionModality": "http://purl.org/nidash/nidm#AcquisitionModality", + "AcquisitionObjectQuality": "http://purl.org/nidash/nidm#AcquisitionObjectQuality", + "Amperometry": "http://purl.org/nidash/nidm#Amperometry", + "AppliedFilter": "http://purl.org/nidash/nidm#AppliedFilter", + "ArterialSpineLabeling": "http://purl.org/nidash/nidm#ArterialSpinLabeling", + "Attenuator": "http://purl.org/nidash/nidm#Attenuator", + "AuxiliaryFile": "http://purl.org/nidash/nidm#AuxiliaryFile", + "AuxiliaryFileCollection": "http://purl.org/nidash/nidm#AuxiliaryFileCollection", + "BandPassFilter": "http://purl.org/nidash/nidm#BandpassFilter", + "BarnesAkathisiaScale": "http://purl.org/nidash/nidm#BarnesAkathisiaScale", + "Barnes_Akathisia_Scale": "http://purl.org/nidash/nidm#BarnesAkathisiaScale", + "BathSolution": "http://purl.org/nidash/nidm#BathSolution", + "BehavioralInstrument": "http://purl.org/nidash/nidm#BehavioralInstrument", + "CalgaryDepressionScale": "http://purl.org/nidash/nidm#CalgaryDepressionScale", + "Cartesian": "http://purl.org/nidash/nidm#Cartesian", + "CategoryFluencyTest": "http://purl.org/nidash/nidm#CategoryFluencyTest", + "CellType": "http://purl.org/nidash/nidm#CellType", + "ChannelNumber": "http://purl.org/nidash/nidm#ChannelNumber", + "ClinicalGlobalImpression": "http://purl.org/nidash/nidm#ClinicalGlobalImpression", + "CoInvestigator": "http://purl.org/nidash/nidm#CoInvestigator", + " ContinuousPerformanceTest": "http://purl.org/nidash/nidm#ContinuousPerformanceTest", + "ContinuousPerformanceTest": "http://purl.org/nidash/nidm#ContinuousPerformanceTest", + "CurrentAmplifier": "http://purl.org/nidash/nidm#CurrentAmplifier", + "CurrentClamp": "http://purl.org/nidash/nidm#CurrentClamp", + "DICOMTagCollection": "http://purl.org/nidash/nidm#DICOMTagCollection", + "DataAcquisitionDevice": "http://purl.org/nidash/nidm#DataAcquisitionDevice", + "DataProcessingDevice": "http://purl.org/nidash/nidm#DataProcessingDevice", + "DelaySemanticLearningTest": "http://purl.org/nidash/nidm#DelaySemanticLearningTest", + "DelaySemanticVerbalLearningTest": "http://purl.org/nidash/nidm#DelaySemanticVerbalLearningTest", + "DelayVisualFiguralLearningTest": "http://purl.org/nidash/nidm#DelayVisualFiguralLearningTest", + "DynamicContrastEnhanced": "http://purl.org/nidash/nidm#DynamicContrastEnhanced", + "DynamicSusceptibiltyContrast": "http://purl.org/nidash/nidm#DynamicSusceptibilityContrast", + "EchoPlanar": "http://purl.org/nidash/nidm#EchoPlanar", + "EdinburghHandednessInventory": "http://purl.org/nidash/nidm#EdinburghHandednessInventory", + "EdinburghHandnessTest": "http://purl.org/nidash/nidm#EdinburghHandnessTest", + "Electrocorticography": "http://purl.org/nidash/nidm#Electrocorticography", + "Electrode": "http://purl.org/nidash/nidm#Electrode", + "ElectrodeImpedance": "http://purl.org/nidash/nidm#ElectrodeImpedance", + "Electroencephalography": "http://purl.org/nidash/nidm#Electroencephalography", + "ElectroencephalographyAcquisitionDevice": "http://purl.org/nidash/nidm#ElectroencephalographyAcquisitionDevice", + "ElectrophysiologyRecording": "http://purl.org/nidash/nidm#ElectrophysiologyRecording", + "ExtracellularElectrophysiologyRecording": "http://purl.org/nidash/nidm#ExtracellularElectrophysiologyRecording", + "EyeTrackingDevice": "http://purl.org/nidash/nidm#EyeTrackingDevice", + "FacialEmotionDiscriminationTest": "http://purl.org/nidash/nidm#FacialEmotionDiscriminationTest", + " FagerstromTestForNicotineDependence": "http://purl.org/nidash/nidm#FagerstromTestForNicotineDependence", + "FagerstromTestForNicotineDependence": "http://purl.org/nidash/nidm#FagerstromTestForNicotineDependence", + "FieldPotential": "http://purl.org/nidash/nidm#FieldPotential", + "FingerTappingTest": "http://purl.org/nidash/nidm#FingerTappingTest", + "Gender": "http://purl.org/nidash/nidm#Gender", + "Group": "http://purl.org/nidash/nidm#Group", + "GroupLabel": "http://purl.org/nidash/nidm#GroupLabel", + "HeartRateMonitor": "http://purl.org/nidash/nidm#HeartRateMonitor", + "HighPassFilter": "http://purl.org/nidash/nidm#HighpassFilter", + "HollowElectrodeSolution": "http://purl.org/nidash/nidm#HollowElectrodeSolution", + "ImageAcquisitionDevice": "http://purl.org/nidash/nidm#ImageAcquisitionDevice", + "ImageContrastType": "http://purl.org/nidash/nidm#ImageContrastType", + "ImageDataReconstruction": "http://purl.org/nidash/nidm#ImageDataReconstruction", + "ImageUsageType": "http://purl.org/nidash/nidm#ImageUsageType", + "InformedConsentInstrument": "http://purl.org/nidash/nidm#InformedConsentInstrument", + "Inside-outSpiral": "http://purl.org/nidash/nidm#Inside-outSpiral", + "InstrumentAdministrator": "http://purl.org/nidash/nidm#InstrumentAdministrator", + "InstrumentUsageType": "http://purl.org/nidash/nidm#InstrumentUsageType", + "IntracellularElectrophysiologyRecording": "http://purl.org/nidash/nidm#IntracellularElectrophysiologyRecording", + "LetterFluencyTest": "http://purl.org/nidash/nidm#LetterFluencyTest", + "LetterNumberSpanTest": "http://purl.org/nidash/nidm#LetterNumberSpanTest", + "LowPassFilter": "http://purl.org/nidash/nidm#LowpassFilter", + "MagneticResonanceImagingScanner": "http://purl.org/nidash/nidm#MagneticResonanceImagingScanner", + "Magnetoencephalography": "http://purl.org/nidash/nidm#Magnetoencephalography", + "MagnetoencephalographyAcquisitionDevice": "http://purl.org/nidash/nidm#MagnetoencephalographyAcquisitionDevice", + "MazeSolvingTest": "http://purl.org/nidash/nidm#MazeSolvingTest", + "ModelDesigner": "http://purl.org/nidash/nidm#ModelDesigner", + "ModelSpecification": "http://purl.org/nidash/nidm#ModelSpecification", + "MultiUnitRecording": "http://purl.org/nidash/nidm#MultiUnitReccording", + "MultielectrodeArray": "http://purl.org/nidash/nidm#MultielectrodeArray", + "hadfMRIDesign": "http://purl.org/nidash/nidm#NIDM_0000010", + "Block-BasedDesign": "http://purl.org/nidash/nidm#NIDM_0000152", + "Event-RelatedDesign": "http://purl.org/nidash/nidm#NIDM_0000153", + "MixedDesign": "http://purl.org/nidash/nidm#NIDM_0000154", + "fMRIDesignType": "http://purl.org/nidash/nidm#NIDM_0000155", + "NorthAmericanAdultReadingTest": "http://purl.org/nidash/nidm#NorthAmericanAdultReadingTest", + "NuclearMagneticResonanceSpectroscopyImaging": "http://purl.org/nidash/nidm#NuclearMagneticResonanceSpectroscopicImaging", + "NuclearMagneticResonanceSpectroscopy": "http://purl.org/nidash/nidm#NuclearMagneticResonanceSpectroscopy", + "NumberOfChannels": "http://purl.org/nidash/nidm#NumberOfChannels", + "Outside-inSpiral": "http://purl.org/nidash/nidm#Outside-inSpiral", + "ParallelImaging": "http://purl.org/nidash/nidm#ParallelImaging", + "PatchClamp": "http://purl.org/nidash/nidm#PatchClamp", + "PerformedPlan": "http://purl.org/nidash/nidm#PerformedPlan", + "PositiveAndNegativeSyndromeScale": "http://purl.org/nidash/nidm#PositiveAndNegativeSyndromeScale", + "PositronEmissionTomography": "http://purl.org/nidash/nidm#PositronEmissionTomography", + "PositronEmissionTomographySCanner": "http://purl.org/nidash/nidm#PositronEmissionTomographyScanner", + "PremorbidAdjustment": "http://purl.org/nidash/nidm#PremorbidAdjustment", + "PremorbidAdjustmentScale": "http://purl.org/nidash/nidm#PremorbidAdjustment", + "PresentationSoftware": "http://purl.org/nidash/nidm#PresentationSoftware", + "PrincipalInvestigator": "http://purl.org/nidash/nidm#PrincipalInvestigator", + "ProcessedAcquisitionObject": "http://purl.org/nidash/nidm#ProcessedAcquisitionObject", + "Protocol": "http://purl.org/nidash/nidm#Protocol", + "ProtonDensityWeighted": "http://purl.org/nidash/nidm#ProtonDensityWeighted", + "PulseSequence": "http://purl.org/nidash/nidm#PulseSequence", + "QuantitativeSusceptibilityMapping": "http://purl.org/nidash/nidm#QuantitativeSusceptibilityMapping", + "RawAcquisitionObject": "http://purl.org/nidash/nidm#RawAcquisitionObject", + "ReconstructedAcquisitionObject": "http://purl.org/nidash/nidm#ReconstructedAcquisitionObject", + "RecordingLocation": "http://purl.org/nidash/nidm#RecordingLocation", + "Rectilinear": "http://purl.org/nidash/nidm#Rectilinear", + "ResearchAssistant": "http://purl.org/nidash/nidm#ResearchAssistant", + "RespirationRateMonitor": "http://purl.org/nidash/nidm#RespirationRateMonitor", + "Series": "http://purl.org/nidash/nidm#Series", + "SessionObject": "http://purl.org/nidash/nidm#SessionObject", + "SharpElectrode": "http://purl.org/nidash/nidm#SharpElectrode", + "SignalFilter": "http://purl.org/nidash/nidm#SignalFilter", + "SignalGenerator": "http://purl.org/nidash/nidm#SignalGenerator", + "SimpsonAngusRatingScale": "http://purl.org/nidash/nidm#SimpsonAngusRatingScale", + "SimultaneousMultisliceMethod": "http://purl.org/nidash/nidm#SimultaneousMultisliceMethod", + "SinglePhotonEmissionComputedTomography": "http://purl.org/nidash/nidm#SinglePhotonEmissionComputedTomography", + "SinglePhotonEmissionComputedTomographyScanner": "http://purl.org/nidash/nidm#SinglePhotonEmissionComputedTomographyScanner", + "SingleUnitReccording": "http://purl.org/nidash/nidm#SingleUnitReccording", + "SocioeconomicScale": "http://purl.org/nidash/nidm#SocioeconomicScale", + "SocioeconomicStatus": "http://purl.org/nidash/nidm#SocioeconomicStatus", + "SolutionFlowSpeed": "http://purl.org/nidash/nidm#SolutionFlowSpeed", + "SpatialMemorySpan": "http://purl.org/nidash/nidm#SpatialMemorySpan", + "SpatialMemorySpanTest": "http://purl.org/nidash/nidm#SpatialMemorySpanTest", + "SpecifiedPlan": "http://purl.org/nidash/nidm#SpecifiedPlan", + "StimulusGenerator": "http://purl.org/nidash/nidm#StimulusGenerator", + "StimulusIsolator": "http://purl.org/nidash/nidm#StimulusIsolator", + "StimulusPresentationFile": "http://purl.org/nidash/nidm#StimulusPresentationFile", + "StroopTest": "http://purl.org/nidash/nidm#StroopTest", + "SusceptibilityWeighted": "http://purl.org/nidash/nidm#SusceptibilityWeighted", + "SusceptibilityWeightedImaging": "http://purl.org/nidash/nidm#SusceptibilityWeightedImaging", + "SymbolDigitAssociationTest": "http://purl.org/nidash/nidm#SymbolDigitAssociationTest", + "TrailsA": "http://purl.org/nidash/nidm#TrailsA", + "TrailsB": "http://purl.org/nidash/nidm#TrailsB", + "VoltageAmplifier": "http://purl.org/nidash/nidm#VoltageAmplifier", + "VoltageClamp": "http://purl.org/nidash/nidm#VoltageClamp", + "WisconsinCardSortingTest": "http://purl.org/nidash/nidm#WisconsinCardSortingTest", + "X-rayComputedTomography": "http://purl.org/nidash/nidm#X-rayComputedTomography", + "b-ValueFile": "http://purl.org/nidash/nidm#b-ValueFile", + "b-VectorFile": "http://purl.org/nidash/nidm#b-VectorFile", + "HadForProperPart": "http://purl.org/nidash/nidm#hadForProperPart", + "hadForScale": "http://purl.org/nidash/nidm#hadForScale", + "hadForSubinstrument": "http://purl.org/nidash/nidm#hadForSubinstrument", + "hadForVariable": "http://purl.org/nidash/nidm#hadForVariable", + "HadImageUsageType": "http://purl.org/nidash/nidm#hadImageUsageType", + "hadNumericalValue": "http://purl.org/nidash/nidm#hadNumericalValue", + "k-spaceTraversalScheme": "http://purl.org/nidash/nidm#k-spaceTraversalScheme", + "wasMeasuredBy": "http://purl.org/nidash/nidm#wasMeasuredBy", + "wasScaleOf": "http://purl.org/nidash/nidm#wasScaleOf", + "Imaging instrument": "http://uri.neuinfo.org/nif/nifstd/birnlex_2094", + "Magnetic resonance imaging scanner": "http://uri.neuinfo.org/nif/nifstd/birnlex_2100", + "MRI protocol": "http://uri.neuinfo.org/nif/nifstd/birnlex_2177", + "Functional MRI protocol": "http://uri.neuinfo.org/nif/nifstd/birnlex_2250", + "Structural MRI protocol": "http://uri.neuinfo.org/nif/nifstd/birnlex_2251", + "Positron emission tomography scanner": "http://uri.neuinfo.org/nif/nifstd/ixl_0050000", + "Single-photon emission computed tomography scanner": "http://uri.neuinfo.org/nif/nifstd/ixl_0050001", + "Magnetoencephalography machine": "http://uri.neuinfo.org/nif/nifstd/ixl_0050002", + "Electroencephalography machine": "http://uri.neuinfo.org/nif/nifstd/ixl_0050003", + "Diffusion-weighted imaging protocol": "http://uri.neuinfo.org/nif/nifstd/nlx_inv_20090249", + "Ex_vivo_subject": "http://www.owl-ontologies.com/Ontology1298855822.owl#Ex_vivo_subject", + "In_vitro_subject": "http://www.owl-ontologies.com/Ontology1298855822.owl#In_vitro_subject", + "In_vivo_subject": "http://www.owl-ontologies.com/Ontology1298855822.owl#In_vivo_subject", + "Phantom_experimental_subject": "http://www.owl-ontologies.com/Ontology1298855822.owl#Phantom_experimental_subject", + "fileName": "http://www.semanticdesktop.org/ontologies/2007/03/22/nfo#fileName", + "Activity": "http://www.w3.org/ns/prov#Activity", + "Agent": "http://www.w3.org/ns/prov#Agent", + "Collection": "http://www.w3.org/ns/prov#Collection", + "Entity": "http://www.w3.org/ns/prov#Entity", + "Plan": "http://www.w3.org/ns/prov#Plan", + "Role": "http://www.w3.org/ns/prov#Role", + "SoftwareAgent": "http://www.w3.org/ns/prov#SoftwareAgent", + "hadMember": "http://www.w3.org/ns/prov#hadMember", + "used": "http://www.w3.org/ns/prov#used", + "wasCreatedBy": "http://www.w3.org/ns/prov#wasCreatedBy" +}