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"""
Database interface for arXiv bot using PostgreSQL
"""
import os
import json
import logging
from typing import List, Dict, Optional
from datetime import datetime
from sqlalchemy import create_engine, Column, String, Text, Integer, BigInteger, Boolean, DateTime, JSON, Index
from sqlalchemy.ext.declarative import declarative_base
from sqlalchemy.orm import sessionmaker, Session
from sqlalchemy.dialects.postgresql import JSONB
from dotenv import load_dotenv
load_dotenv()
# Setup logging
logger = logging.getLogger(__name__)
# Database connection
DATABASE_URL = os.getenv("DATABASE_URL")
USE_DATABASE = os.getenv("USE_DATABASE", "false").lower() == "true"
# Create base class for declarative models
Base = declarative_base()
class Paper(Base):
"""Paper model for storing arXiv papers"""
__tablename__ = 'papers'
id = Column(String(50), primary_key=True) # arXiv ID
arxiv_id = Column(String(50), nullable=False, index=True)
title = Column(Text, nullable=False)
authors = Column(JSONB) # Store as JSON array
url = Column(Text)
abstract = Column(Text)
main_content = Column(JSONB) # Store structured content
tuples = Column(JSONB) # Store tuples for processing
section_summaries = Column(JSONB) # Store summaries
general_summary = Column(Text)
created_at = Column(DateTime, default=datetime.utcnow)
updated_at = Column(DateTime, default=datetime.utcnow, onupdate=datetime.utcnow)
# Create text search index
__table_args__ = (
Index('idx_title_search', 'title', postgresql_using='gin', postgresql_ops={'title': 'gin_trgm_ops'}),
)
class BotUser(Base):
"""User model for Telegram bot users"""
__tablename__ = 'bot_users'
user_id = Column(BigInteger, primary_key=True)
username = Column(String(255))
first_name = Column(String(255))
last_name = Column(String(255))
is_admin = Column(Boolean, default=False, index=True)
is_authorized = Column(Boolean, default=True, index=True)
created_at = Column(DateTime, default=datetime.utcnow)
last_active = Column(DateTime, default=datetime.utcnow)
class Search(Base):
"""Search history model"""
__tablename__ = 'searches'
id = Column(Integer, primary_key=True, autoincrement=True)
user_id = Column(BigInteger, nullable=False)
topic = Column(Text, nullable=False)
time_range = Column(String(100))
papers_found = Column(Integer)
created_at = Column(DateTime, default=datetime.utcnow)
class DatabaseManager:
"""Database manager for paper storage and retrieval"""
def __init__(self, database_url: str = None):
"""Initialize database connection"""
self.database_url = database_url or DATABASE_URL
if not self.database_url:
logger.warning("DATABASE_URL not set. Database operations will fail.")
self.engine = None
self.SessionLocal = None
return
try:
self.engine = create_engine(
self.database_url,
pool_size=10, # Increased pool size
max_overflow=20, # More overflow connections
pool_pre_ping=True, # Verify connections before using
pool_recycle=3600, # Recycle connections after 1 hour
pool_timeout=120, # Wait up to 2 minutes for a connection
connect_args={
'connect_timeout': 60, # 60 seconds to establish connection
'options': '-c statement_timeout=14400000' # 4 hour query timeout (in ms)
},
echo=False # Set to True for SQL debugging
)
self.SessionLocal = sessionmaker(bind=self.engine)
logger.info("Database connection established")
except Exception as e:
logger.error(f"Failed to connect to database: {e}")
self.engine = None
self.SessionLocal = None
def create_tables(self):
"""Create all tables if they don't exist"""
if self.engine:
Base.metadata.create_all(self.engine)
logger.info("Database tables created/verified")
def get_session(self) -> Session:
"""Get a new database session"""
if not self.SessionLocal:
raise RuntimeError("Database not initialized")
return self.SessionLocal()
# Paper operations
def add_paper(self, paper_data: Dict) -> bool:
"""Add a new paper to database"""
try:
session = self.get_session()
paper = Paper(
id=paper_data.get("id"),
arxiv_id=paper_data.get("id"),
title=paper_data.get("title"),
authors=json.dumps(paper_data.get("authors", [])),
url=paper_data.get("url"),
abstract=paper_data.get("Abstract", ""),
main_content=json.dumps(paper_data.get("Main", {})),
tuples=json.dumps(paper_data.get("Tuples", [])),
section_summaries=json.dumps(paper_data.get("section_summaries", [])),
general_summary=paper_data.get("general_summary", "")
)
session.add(paper)
session.commit()
session.close()
logger.info(f"Added paper: {paper_data.get('id')}")
return True
except Exception as e:
logger.error(f"Error adding paper: {e}")
session.rollback()
session.close()
return False
def get_paper(self, paper_id: str) -> Optional[Dict]:
"""Get a paper by ID"""
try:
session = self.get_session()
paper = session.query(Paper).filter(Paper.id == paper_id).first()
session.close()
if paper:
return self._paper_to_dict(paper)
return None
except Exception as e:
logger.error(f"Error getting paper: {e}")
return None
def paper_exists(self, paper_id: str) -> bool:
"""Check if a paper exists in database"""
try:
session = self.get_session()
exists = session.query(Paper.id).filter(Paper.id == paper_id).first() is not None
session.close()
return exists
except Exception as e:
logger.error(f"Error checking paper existence: {e}")
return False
def get_all_papers(self) -> List[Dict]:
"""Get all papers from database"""
try:
session = self.get_session()
papers = session.query(Paper).all()
session.close()
return [self._paper_to_dict(p) for p in papers]
except Exception as e:
logger.error(f"Error getting all papers: {e}")
return []
def get_papers_by_ids(self, paper_ids: List[str]) -> List[Dict]:
"""Get multiple papers by their IDs"""
try:
session = self.get_session()
papers = session.query(Paper).filter(Paper.id.in_(paper_ids)).all()
session.close()
return [self._paper_to_dict(p) for p in papers]
except Exception as e:
logger.error(f"Error getting papers by IDs: {e}")
return []
def update_paper(self, paper_id: str, updates: Dict) -> bool:
"""Update a paper's information"""
try:
session = self.get_session()
paper = session.query(Paper).filter(Paper.id == paper_id).first()
if not paper:
session.close()
return False
# Update fields
for key, value in updates.items():
if hasattr(paper, key):
setattr(paper, key, value)
session.commit()
session.close()
return True
except Exception as e:
logger.error(f"Error updating paper: {e}")
session.rollback()
session.close()
return False
def delete_old_papers(self, days: int = 180) -> int:
"""Delete papers older than specified days"""
try:
from datetime import timedelta
session = self.get_session()
cutoff_date = datetime.utcnow() - timedelta(days=days)
deleted = session.query(Paper).filter(Paper.created_at < cutoff_date).delete()
session.commit()
session.close()
logger.info(f"Deleted {deleted} old papers")
return deleted
except Exception as e:
logger.error(f"Error deleting old papers: {e}")
session.rollback()
session.close()
return 0
# User operations
def add_user(self, user_id: int, username: str = None, first_name: str = None,
last_name: str = None, is_admin: bool = False) -> bool:
"""Add a new user"""
try:
session = self.get_session()
# Check if user exists
existing = session.query(BotUser).filter(BotUser.user_id == user_id).first()
if existing:
# Update last active
existing.last_active = datetime.utcnow()
session.commit()
session.close()
return True
user = BotUser(
user_id=user_id,
username=username,
first_name=first_name,
last_name=last_name,
is_admin=is_admin
)
session.add(user)
session.commit()
session.close()
return True
except Exception as e:
logger.error(f"Error adding user: {e}")
session.rollback()
session.close()
return False
def get_user(self, user_id: int) -> Optional[Dict]:
"""Get user by ID"""
try:
session = self.get_session()
user = session.query(BotUser).filter(BotUser.user_id == user_id).first()
session.close()
if user:
return {
'user_id': user.user_id,
'username': user.username,
'is_admin': user.is_admin,
'is_authorized': user.is_authorized
}
return None
except Exception as e:
logger.error(f"Error getting user: {e}")
return None
def get_authorized_users(self) -> List[int]:
"""Get list of authorized user IDs"""
try:
session = self.get_session()
users = session.query(BotUser.user_id).filter(BotUser.is_authorized == True).all()
session.close()
return [u[0] for u in users]
except Exception as e:
logger.error(f"Error getting authorized users: {e}")
return []
def update_user_authorization(self, user_id: int, is_authorized: bool) -> bool:
"""Update user authorization status"""
try:
session = self.get_session()
user = session.query(BotUser).filter(BotUser.user_id == user_id).first()
if user:
user.is_authorized = is_authorized
session.commit()
session.close()
return True
session.close()
return False
except Exception as e:
logger.error(f"Error updating user authorization: {e}")
session.rollback()
session.close()
return False
# Search history operations
def log_search(self, user_id: int, topic: str, time_range: str, papers_found: int) -> bool:
"""Log a search query"""
try:
session = self.get_session()
search = Search(
user_id=user_id,
topic=topic,
time_range=time_range,
papers_found=papers_found
)
session.add(search)
session.commit()
session.close()
return True
except Exception as e:
logger.error(f"Error logging search: {e}")
session.rollback()
session.close()
return False
# Helper methods
@staticmethod
def _paper_to_dict(paper: Paper) -> Dict:
"""Convert Paper object to dictionary"""
return {
'id': paper.id,
'title': paper.title,
'authors': json.loads(paper.authors) if paper.authors else [],
'url': paper.url,
'Abstract': paper.abstract,
'Main': json.loads(paper.main_content) if paper.main_content else {},
'Tuples': json.loads(paper.tuples) if paper.tuples else [],
'section_summaries': json.loads(paper.section_summaries) if paper.section_summaries else [],
'general_summary': paper.general_summary or ''
}
# Singleton instance
_db_manager = None
def get_db_manager() -> DatabaseManager:
"""Get or create database manager singleton"""
global _db_manager
if _db_manager is None:
_db_manager = DatabaseManager()
if _db_manager.engine:
_db_manager.create_tables()
return _db_manager