Create code to linearly register SC lesion masks in subject PSIR to subject MT space and calculate MTR for ROIs excluding SC lesions #91
Description
This issue is a followup from #88 (comment). After merging #90 we want to modify @leelisae's code to add the following features:
- linearly register SC lesion masks in subject PSIR to subject MT space
- calculate MTR for ROIs excluding SC lesions