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Copy pathbaseSettings.py
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273 lines (241 loc) · 10.3 KB
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import tkinter as tk
from dataclasses import dataclass
from abc import ABC, abstractmethod
from functools import reduce #magical function that makes recusive object/property calling happen
class basePrintSettings():
def __init__(self):
self.tabNameDictionary = {"demographic_Info":self.printDemographicInfo,
"daily_Updates":self.printDailyUpdates,
"plan":self.printPlan}
def printDemographicInfo(self,patient):
name = patient.demographic_Info.name.get()
age = patient.demographic_Info.age.get()
gender = patient.demographic_Info.gender.get()
pastHistory = patient.demographic_Info.past_History.get('1.0',tk.END)
hisotryOfPresentIllness = patient.demographic_Info.hisotry_Of_Present_Illness.get('1.0',tk.END)
useName = 1 if patient.demographic_Info.name.isRelevant.get() == 1 else 0
useAge = 1 if patient.demographic_Info.age.isRelevant.get() == 1 else 0
useGender = 1 if patient.demographic_Info.gender.isRelevant.get() == 1 else 0
usePastHistory = 1 if patient.demographic_Info.past_History.isRelevant.get() == 1 else 0
usePresentHistory = 1 if patient.demographic_Info.hisotry_Of_Present_Illness.isRelevant.get() == 1 else 0
demographicInfoString = ''
if useName == 0:
name = 'Patient'
if useGender == 1 or useAge == 1:
demographicInfoString = demographicInfoString + f"{name} is a "
else:
demographicInfoString = demographicInfoString + f"{name} "
if useAge == 1:
demographicInfoString = demographicInfoString + f"{age} year old "
if useGender ==1:
demographicInfoString = demographicInfoString + f"{gender} "
if usePastHistory == 1:
if useAge == 1 or useGender == 1:
demographicInfoString = demographicInfoString + f"with a past medical history of {pastHistory}\n"
else:
demographicInfoString = demographicInfoString + f"has a past medical history of {pastHistory}\n"
if usePresentHistory == 1:
demographicInfoString = demographicInfoString + f"{name} presented with {hisotryOfPresentIllness}\n"
demographicInfoString = demographicInfoString + "\n"
return demographicInfoString
def printDailyUpdates(self,patient):
labNames = patient.daily_Updates.labs.names
dailyUpdateString = ''
if patient.daily_Updates.tabIsRelevant.get():
for lab in labNames:
if getattr(patient.daily_Updates,lab).isRelevant.get():
dailyUpdateString = dailyUpdateString + getLab(patient,lab)
pass
return dailyUpdateString
def printPlan(self,patient):
return ''
def checkValueAgainstStandard(value,defaultValues):
if float(value)<defaultValues[0]:
return '. This value is low.'
elif float(value)>defaultValues[1]:
return '. This value is high.'
else:
return ''
def pullUnitsFromStructure(structure):
unitList = []
for subfield in structure['multifield']:
if type(subfield) is dict:
unitList.append(subfield['entry'][2])
return unitList
def pullLabVals(labVals,labUnits,index):
if labUnits[index] == '':
return labVals[index]
else:
return f"{labVals[index]} {labUnits[index]}"
@dataclass
class lab():
entries:list[list]
structure:dict
defaultRanges:list[list]
printer:str
def printCBC(labVals,relevantFlags,labStruct):
defaultValues = labStruct.defaultRanges
labUnits = pullUnitsFromStructure(labStruct.structure)
output = ''
valueIndex = 0
if relevantFlags[valueIndex] ==1:
output += f'\n RBC of {pullLabVals(labVals,labUnits,valueIndex)}'
output += checkValueAgainstStandard(labVals[valueIndex],defaultValues[valueIndex])
valueIndex += 1
if relevantFlags[valueIndex] ==1:
output += f'\n WBC of {pullLabVals(labVals,labUnits,valueIndex)}'
output += checkValueAgainstStandard(labVals[valueIndex],defaultValues[valueIndex])
valueIndex += 1
if relevantFlags[valueIndex] ==1:
output += f'\n Hemoglobin level of {pullLabVals(labVals,labUnits,valueIndex)}'
output += checkValueAgainstStandard(labVals[valueIndex],defaultValues[valueIndex])
valueIndex += 1
if relevantFlags[valueIndex] ==1:
output += f'\n Hematocrit of {pullLabVals(labVals,labUnits,valueIndex)}'
output += checkValueAgainstStandard(labVals[valueIndex],defaultValues[valueIndex])
valueIndex += 1
if relevantFlags[valueIndex] ==1:
output += f'\n Platelet count of {pullLabVals(labVals,labUnits,valueIndex)}'
output += checkValueAgainstStandard(labVals[valueIndex],defaultValues[valueIndex])
if output != '':
output = '\nCBC lab results:' + output
return output
cbcLab = lab(entries = ['rbc','wbc','hemoglobin','hematocrit','platelet'],
structure= {'multifield':['cbc','lab',
{'entry':['RBC','0','trillion cells/L']},
{'entry':['WBC','0','billion cells/L']},
{'entry':['Hemoglobin','0','g/dL']},
{'entry':['Hematocrit','0','%']},
{'entry':['Platelet','0','billion/L']}
]},
defaultRanges=[[0,1],[0,1],[0,1],[0,1],[0,1]],
printer=printCBC)
def printCMP(labVals,relevantFlags,labStruct):
defaultValues = labStruct.defaultRanges
labUnits = pullUnitsFromStructure(labStruct.structure)
output = ''
valueIndex = 0
if relevantFlags[valueIndex] ==1:
output += f'\n Albumin of {pullLabVals(labVals,labUnits,valueIndex)}'
output += checkValueAgainstStandard(labVals[valueIndex],defaultValues[valueIndex])
valueIndex += 1
if relevantFlags[valueIndex] ==1:
output += f'\n Alkaline of {pullLabVals(labVals,labUnits,valueIndex)}'
output += checkValueAgainstStandard(labVals[valueIndex],defaultValues[valueIndex])
valueIndex += 1
if relevantFlags[valueIndex] ==1:
output += f'\n ALA level of {pullLabVals(labVals,labUnits,valueIndex)}'
output += checkValueAgainstStandard(labVals[valueIndex],defaultValues[valueIndex])
valueIndex += 1
if relevantFlags[valueIndex] ==1:
output += f'\n AST of {pullLabVals(labVals,labUnits,valueIndex)}'
output += checkValueAgainstStandard(labVals[valueIndex],defaultValues[valueIndex])
valueIndex += 1
if relevantFlags[valueIndex] ==1:
output += f'\n BUN of {pullLabVals(labVals,labUnits,valueIndex)}'
output += checkValueAgainstStandard(labVals[valueIndex],defaultValues[valueIndex])
valueIndex += 1
if relevantFlags[valueIndex] ==1:
output += f'\n Calcium of {pullLabVals(labVals,labUnits,valueIndex)}'
output += checkValueAgainstStandard(labVals[valueIndex],defaultValues[valueIndex])
valueIndex += 1
if relevantFlags[valueIndex] ==1:
output += f'\n Chloride of {pullLabVals(labVals,labUnits,valueIndex)}'
output += checkValueAgainstStandard(labVals[valueIndex],defaultValues[valueIndex])
valueIndex += 1
if relevantFlags[valueIndex] ==1:
output += f'\n CO2 of {pullLabVals(labVals,labUnits,valueIndex)}'
output += checkValueAgainstStandard(labVals[valueIndex],defaultValues[valueIndex])
valueIndex += 1
if relevantFlags[valueIndex] ==1:
output += f'\n Creatine of {pullLabVals(labVals,labUnits,valueIndex)}'
output += checkValueAgainstStandard(labVals[valueIndex],defaultValues[valueIndex])
valueIndex += 1
if relevantFlags[valueIndex] ==1:
output += f'\n Glucose of {pullLabVals(labVals,labUnits,valueIndex)}'
output += checkValueAgainstStandard(labVals[valueIndex],defaultValues[valueIndex])
valueIndex += 1
if relevantFlags[valueIndex] ==1:
output += f'\n Potassium of {pullLabVals(labVals,labUnits,valueIndex)}'
output += checkValueAgainstStandard(labVals[valueIndex],defaultValues[valueIndex])
valueIndex += 1
if relevantFlags[valueIndex] ==1:
output += f'\n Sodium of {pullLabVals(labVals,labUnits,valueIndex)}'
output += checkValueAgainstStandard(labVals[valueIndex],defaultValues[valueIndex])
valueIndex += 1
if relevantFlags[valueIndex] ==1:
output += f'\n Total billirubin of {pullLabVals(labVals,labUnits,valueIndex)}'
output += checkValueAgainstStandard(labVals[valueIndex],defaultValues[valueIndex])
valueIndex += 1
if relevantFlags[valueIndex] ==1:
output += f'\n Total protein of {pullLabVals(labVals,labUnits,valueIndex)}'
output += checkValueAgainstStandard(labVals[valueIndex],defaultValues[valueIndex])
if output != '':
output = '\nCMP lab results:' + output
return output
cmpLab = lab(entries = ['albumin','alkaline','ala','ast','bun',\
'calcuium','chloride','co2','creatine', 'glucose',\
'potassium','sodium','total_Billirubin','total_Protein'],
structure= {'multifield':['cmp','lab',
{'entry':['Albumin','0','']},
{'entry':['Alkaline','0','']},
{'entry':['ALA','0','']},
{'entry':['AST','0','']},
{'entry':['BUN','0','']},
{'entry':['Calcuium','0','']},
{'entry':['Chloride','0','']},
{'entry':['CO2','0','']},
{'entry':['Creatine','0','']},
{'entry':['Glucose','0','']},
{'entry':['Potassium','0','']},
{'entry':['Sodium','0','']},
{'entry':['Total Billirubin','0','']},
{'entry':['Total Protein','0','']},
]},
defaultRanges=[[0,1],[0,1],[0,1],[0,1],
[0,1],[0,1],[0,1],[0,1],
[0,1],[0,1],[0,1],[0,1],
[0,1],[0,1]],
printer=printCMP)
def printBMP(bmpValues,defaultValues,relevantFlags):
return ''
bmpLab = lab(entries = ['stuff1','stuff2'],
structure= {'multifield':['bmp','lab',
{'entry':['Stuff1','0','']},
{'entry':['Stuff2','0','']}
]},
defaultRanges=[[0,1],[0,1]],
printer=printBMP)
_labDict = {'cbc':cbcLab,
'cmp':cmpLab,
'bmp':bmpLab}
def getLab(patient,labFullName):
values = []
relevantFlags = []
labName,labNumber = labFullName.split('_')
for entry in _labDict[labName].entries:
values.append(getattr(patient.daily_Updates,entry + f"_{labNumber}").get())
relevantFlags.append(reduce(getattr,['daily_Updates',entry + f"_{labNumber}",'isRelevant'],patient).get())
##implement calling the right print statement
return _labDict[labName].printer(values,relevantFlags,_labDict[labName])
def addLab(patient,labName):
patient.daily_Updates.labs.number = patient.daily_Updates.labs.number + 1
#Check if any of the existing labs share a name with this one
sameLabs = [oldLabName for oldLabName in patient.daily_Updates.labs.names if labName in oldLabName]
#if they do, update the number of the current lab
labNum =1
if sameLabs:
for oldLab in sameLabs:
oldNum = int(oldLab.split('_')[1])
if oldNum >= labNum:
labNum = oldNum + 1
addedField = patient.daily_Updates.addField(_labDict[labName].structure, "_" + str(labNum))
patient.daily_Updates.labs.names.append(labName + '_' + str(labNum))
patient.daily_Updates.fields.append(addedField)
def addImaging(patient):
pass
def addProblem(patient):
pass
class patientPrinter(basePrintSettings):
def __init__(self):
super(patientPrinter, self).__init__()