bigtools/.github/workflows/ci.yml at 9fd5838e50da94a0bf659c0a63aa05a2ab3f8eaa · jackh726/bigtools · GitHub

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name: CI
on:
  push:
    branches:
      - master
  pull_request:
    branches:
      - "**"

jobs:
  test-lib:
    name: Test bigtools
    runs-on: ubuntu-latest
    continue-on-error: ${{ matrix.rust == 'nightly' }}
    strategy:
      matrix:
        rust: [stable, nightly]
    steps:
      - name: Checkout the source code
        uses: actions/checkout@v2
        with:
          fetch-depth: 1

      - name: Install Rust toolchain
        uses: actions-rs/toolchain@v1
        with:
          toolchain: ${{ matrix.rust }}
          profile: minimal
          override: true

      - name: Build without default features
        run: cargo build --no-default-features

      - name: Build with all features
        run: cargo build --all-features

      - name: Check with read feature
        run: cargo check --features read

      - name: Build with write feature
        run: cargo build --features write

      - name: Execute all tests
        run: cargo test --all

  test-python:
    name: Test pybigtools
    runs-on: ubuntu-latest
    strategy:
      matrix:
        python-version:
          - '3.10'
          - '3.11'
          - '3.12'
          - '3.13'
    steps:
      - uses: actions/checkout@v5

      - name: Install Rust toolchain
        uses: actions-rs/toolchain@v1
        with:
          toolchain: stable
          override: true

      - name: Setup Python environment
        uses: astral-sh/setup-uv@v6
        with:
          working-directory: "pybigtools"
          python-version: ${{ matrix.python-version }}

      - name: Run tests
        run: |
          cd pybigtools
          uv run pytest

  lint-rust:
    name: Lint Rust
    runs-on: ubuntu-latest
    steps:
      - name: Checkout the source code
        uses: actions/checkout@v2
        with:
          fetch-depth: 1

      - name: Install Rust toolchain
        uses: actions-rs/toolchain@v1
        with:
          toolchain: stable
          profile: minimal
          override: true
          components: rustfmt

      - name: Check formatting of all crates in the workspace
        run: cargo fmt --all -- --check

  lint-python:
    name: Lint Python
    runs-on: ubuntu-latest
    steps:
      - uses: actions/checkout@v5
      - uses: astral-sh/setup-uv@v6
        with:
          working-directory: "pybigtools"
      - run: |
          cd pybigtools
          uv run ruff format --check
          uv run ruff check