bsg_cyllama/pyproject.toml at main · jimnoneill/bsg_cyllama · GitHub

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[build-system]
requires = ["setuptools>=61.0", "wheel"]
build-backend = "setuptools.build_meta"

[project]
name = "bsg-cyllama"
version = "1.0.0"
description = "Biomedical Summary Generation through Cyclical Llama fine-tuning"
readme = "README.md"
license = {text = "Llama 3.2 Community License"}
authors = [
    {name = "Jamey O'Neill", email = "jimnoneill@example.com"}
]
keywords = [
    "nlp",
    "summarization",
    "biomedical",
    "llama",
    "transformers",
    "deep-learning",
    "scientific-text",
    "sbert"
]
classifiers = [
    "Development Status :: 4 - Beta",
    "Intended Audience :: Science/Research",
    "Topic :: Scientific/Engineering :: Artificial Intelligence",
    "Topic :: Text Processing :: Linguistic",
    "Programming Language :: Python :: 3",
    "Programming Language :: Python :: 3.10",
    "Programming Language :: Python :: 3.11",
]
requires-python = ">=3.10"
dependencies = [
    "torch>=2.0.0",
    "transformers>=4.36.0",
    "peft>=0.7.0",
    "bitsandbytes>=0.41.0",
    "accelerate>=0.25.0",
    "sentence-transformers>=2.2.0",
    "pandas>=2.0.0",
    "numpy>=1.24.0",
    "tqdm>=4.65.0",
    "pyyaml>=6.0",
]

[project.optional-dependencies]
dev = [
    "pytest>=7.0.0",
    "pytest-cov>=4.0.0",
    "black>=23.0.0",
    "isort>=5.12.0",
    "flake8>=6.0.0",
]
notebook = [
    "jupyter>=1.0.0",
    "ipywidgets>=8.0.0",
    "matplotlib>=3.7.0",
]

[project.urls]
Homepage = "https://github.com/jimnoneill/bsg_cyllama"
Documentation = "https://github.com/jimnoneill/bsg_cyllama#readme"
Repository = "https://github.com/jimnoneill/bsg_cyllama"
"Model on HuggingFace" = "https://huggingface.co/jimnoneill/BSG_CyLlama"
"Dataset on HuggingFace" = "https://huggingface.co/datasets/jimnoneill/BSG_CyLlama-training"

[project.scripts]
bsg-train = "bsg_cyllama.scripts.train:main"
bsg-generate = "bsg_cyllama.scripts.generate:main"

[tool.setuptools.packages.find]
where = ["src"]

[tool.black]
line-length = 88
target-version = ['py310', 'py311']
include = '\.pyi?$'

[tool.isort]
profile = "black"
line_length = 88

[tool.pytest.ini_options]
testpaths = ["tests"]
python_files = ["test_*.py"]
addopts = "-v --cov=bsg_cyllama"