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train_BCP.py
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621 lines (501 loc) · 25.6 KB
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import os
import shutil
import logging
import argparse
import random
import datetime
import gc
import numpy as np
import pandas as pd
import torch
import torch.nn as nn
import torch.backends.cudnn as cudnn
from torch.utils.tensorboard import SummaryWriter
from tqdm import tqdm
from skimage.measure import label
import dataset as dataset
from losses import DiceLoss
from util import model_summary, setup_logging, test_batch
from zoo.UNet import UNet
def get_args():
parser = argparse.ArgumentParser()
# Data related
parser.add_argument("--exp", type=str, default="BCP", help="Experiment name")
parser.add_argument("--dataset", type=str, default="LN", help="Dataset name")
parser.add_argument("--img_size", type=int, default=256, help="Image width and height")
parser.add_argument("--strong_augs", default=False, action=argparse.BooleanOptionalAction, help="Use strong augs")
parser.add_argument("--weak_augs", default=False, action=argparse.BooleanOptionalAction, help="Use weak augs")
parser.add_argument("--num_strong_augs", type=int, default=1, help="Number of strong augs")
parser.add_argument("--num_weak_augs", type=int, default=1, help="Number of weak augs")
parser.add_argument("--randn_strong_augs", default=True, action="store_true", help="Random k strong augs")
parser.add_argument("--randn_weak_augs", default=True, action="store_true", help="Random k weak augs")
parser.add_argument("--num_workers", type=int, default=8)
# Model related
parser.add_argument("--in_channels", type=int, default=1)
parser.add_argument("--num_classes", type=int, default=2)
# Training related
parser.add_argument("--deterministic", default=True, action="store_true", help="Whether use deterministic training")
parser.add_argument("--seed", type=int, default=1)
parser.add_argument("--pre_iters", type=int, default=10000)
parser.add_argument("--self_iters", type=int, default=30000)
parser.add_argument("--batch_size", type=int, default=16)
parser.add_argument("--labeled_bs", type=int, default=None, help="Batch size for labeled data")
parser.add_argument("--labeled_ratio", type=float, default=0.05, help="Ratio of labeled data")
parser.add_argument("--learning_rate", type=float, default=5e-2)
parser.add_argument("--weight_decay", type=float, default=1e-4)
# Testing related
parser.add_argument("--test", default=False, action="store_true", help="Load local checkpoint for testing")
return parser.parse_args()
args = get_args()
# Set labeled batch size as half of the total batch size if not specified
if args.labeled_bs is None:
args.labeled_bs = args.batch_size // 2
# Loss functions
dice_loss = DiceLoss(n_classes=args.num_classes)
def update_ema_variables(model, ema_model, alpha):
for ema_param, param in zip(ema_model.parameters(), model.parameters()):
ema_param.data.mul_(alpha).add_(param.data, alpha=1 - alpha)
def generate_mask(img):
batch_size, _, img_x, img_y = img.shape[0], img.shape[1], img.shape[2], img.shape[3]
loss_mask = torch.ones((batch_size, img_x, img_y), device=torch.device("cuda"))
mask = torch.ones((img_x, img_y), device=torch.device("cuda"))
patch_x, patch_y = int(img_x * 2 / 3), int(img_y * 2 / 3)
w = np.random.randint(0, img_x - patch_x)
h = np.random.randint(0, img_y - patch_y)
mask[w : w + patch_x, h : h + patch_y] = 0
loss_mask[:, w : w + patch_x, h : h + patch_y] = 0
return mask.long(), loss_mask.long()
def mix_loss(output, img_l, patch_l, mask, l_weight=1.0, u_weight=0.5, unlab=False):
CE = nn.CrossEntropyLoss(reduction="none")
img_l, patch_l = img_l.type(torch.int64), patch_l.type(torch.int64)
output_soft = torch.softmax(output, dim=1)
image_weight, patch_weight = l_weight, u_weight
if unlab:
image_weight, patch_weight = u_weight, l_weight
patch_mask = 1 - mask
loss_dice = dice_loss(output_soft, img_l.unsqueeze(1), mask.unsqueeze(1)) * image_weight
loss_dice += dice_loss(output_soft, patch_l.unsqueeze(1), patch_mask.unsqueeze(1)) * patch_weight
loss_ce = image_weight * (CE(output, img_l) * mask).sum() / (mask.sum() + 1e-16)
loss_ce += patch_weight * (CE(output, patch_l) * patch_mask).sum() / (patch_mask.sum() + 1e-16) # loss = loss_ce
return loss_dice, loss_ce
def get_largest_cc(probs):
N = probs.shape[0]
probs_np = probs.detach().cpu().numpy()
batch_list = []
for n in range(N):
n_prob = probs_np[n]
labels = label(n_prob)
if labels.max() != 0:
largest_cc = labels == np.argmax(np.bincount(labels.flat)[1:]) + 1
else:
largest_cc = n_prob
batch_list.append(largest_cc.astype(np.float32)) # Ensure correct type
batch_tensor = torch.from_numpy(np.array(batch_list)).cuda()
return batch_tensor
def get_cut_mask(out, thres=0.5, nms=False):
probs = torch.softmax(out, 1)
masks = (probs >= thres).type(torch.int64)
masks = masks[:, 1, :, :].contiguous()
if nms:
masks = get_largest_cc(masks)
return masks
def load_net(net, path):
state = torch.load(str(path), weights_only=True)
net.load_state_dict(state["net"])
def load_net_opt(net, optimizer, path):
state = torch.load(str(path), weights_only=True)
net.load_state_dict(state["net"])
optimizer.load_state_dict(state["opt"])
def save_net_opt(net, optimizer, path):
state = {"net": net.state_dict(), "opt": optimizer.state_dict()}
torch.save(state, str(path))
def create_net(in_channels, num_classes, ema=False):
model = UNet(in_channels=in_channels, num_classes=num_classes).cuda()
if ema:
for param in model.parameters():
param.detach_()
return model
def pre_train(args):
# Model initialization
model = create_net(args.in_channels, args.num_classes)
model.train()
model_summary({"model": model})
# Data initialization
dm = dataset.DataModule(args)
trainloader, valloader, testloader = (dm.train_dataloader(), dm.val_dataloader(), dm.test_dataloader())
# Optimizer initialization
optimizer = torch.optim.SGD(model.parameters(), lr=args.learning_rate, momentum=0.9, weight_decay=args.weight_decay)
scheduler = torch.optim.lr_scheduler.CosineAnnealingLR(optimizer, T_max=args.pre_iters)
writer = SummaryWriter(args.pre_snapshot_path + "/log")
logging.info("Start pre-training")
iter_num = 0
best_performance = 0.0
max_iters = args.pre_iters
max_epoch = max_iters // len(trainloader) + 1
iterator = tqdm(range(max_epoch), ncols=70)
labeled_bs, labeled_sub_bs = args.labeled_bs, args.labeled_bs // 2
for _ in iterator:
for _, sampled_batch in enumerate(trainloader):
volume_batch, label_batch, _ = sampled_batch
volume_batch, label_batch = volume_batch.cuda(), label_batch.cuda()
# Split labeled and unlabeled data
image_a, image_b = (volume_batch[:labeled_sub_bs], volume_batch[labeled_sub_bs:labeled_bs])
label_a, label_b = (label_batch[:labeled_sub_bs], label_batch[labeled_sub_bs:labeled_bs])
mask, loss_mask = generate_mask(image_a)
input_image = image_a * mask + image_b * (1 - mask)
gt_mixed = label_a * mask + label_b * (1 - mask)
# Get predictions from the models
outs = model(input_image)
outs_soft = torch.softmax(outs, dim=1)
# Compute loss
loss_ce, loss_dice = mix_loss(
outs, label_a.squeeze(1), label_b.squeeze(1), loss_mask, u_weight=1.0, unlab=True
)
loss = (loss_ce + loss_dice) / 2
if iter_num % 10 == 0:
writer.add_scalar("train/ce_loss", loss_ce.item(), iter_num)
writer.add_scalar("train/dice_loss", loss_dice.item(), iter_num)
writer.add_scalar("train/total_loss", loss.item(), iter_num)
writer.add_scalar("train/lr", scheduler.get_last_lr()[0], iter_num)
# Update model
optimizer.zero_grad()
loss.backward()
optimizer.step()
scheduler.step()
iter_num += 1
# Log images for visualization (first batch of every n iters)
if iter_num % 1000 == 0:
input_images = input_image[:4]
outs_viz = outs_soft[:4]
labels_viz = gt_mixed[:4]
outs_viz = torch.argmax(outs_viz, dim=1).unsqueeze(1)
writer.add_images("pre_train/input_images", input_images, iter_num)
writer.add_images("pre_train/outputs", outs_viz, iter_num)
writer.add_images("pre_train/labels", labels_viz, iter_num)
# Explicitly delete tensors to free up memory immediately
del volume_batch, label_batch, image_a, image_b, label_a, label_b
del (mask, loss_mask, input_image, gt_mixed, outs, outs_soft, loss, loss_ce, loss_dice)
del sampled_batch
# Validation
if iter_num > 0 and iter_num % 200 == 0:
model.eval()
metric_dict = {"dice": [], "iou": [], "hd95": [], "asd": []}
for _, sampled_batch in enumerate(valloader):
metrics = test_batch(images=sampled_batch[0], labels=sampled_batch[1], model=model)
for key in metric_dict:
metric_dict[key].extend(metrics[key])
dice_mean = np.mean(metric_dict["dice"])
iou_mean = np.mean(metric_dict["iou"])
hd95_values = np.array(metric_dict["hd95"])
hd95_mean = (
np.mean(hd95_values[np.isfinite(hd95_values)]) if np.any(np.isfinite(hd95_values)) else np.nan
)
asd_values = np.array(metric_dict["asd"])
asd_mean = np.mean(asd_values[np.isfinite(asd_values)]) if np.any(np.isfinite(asd_values)) else np.nan
writer.add_scalar("info/val_dice", dice_mean, iter_num)
writer.add_scalar("info/val_iou", iou_mean, iter_num)
writer.add_scalar("info/val_hd95", hd95_mean, iter_num)
writer.add_scalar("info/val_asd", asd_mean, iter_num)
# Save best model
if dice_mean > best_performance:
best_performance = dice_mean
save_best = os.path.join(args.pre_snapshot_path, "unet_best_model.pth")
save_net_opt(model, optimizer, save_best)
logging.info(
f"\titer: {iter_num}, dice: {dice_mean * 100:.2f}, iou: {iou_mean * 100:.2f}, "
f"hd95: {hd95_mean:.2f}, asd: {asd_mean:.2f}"
)
# Testing
metric_dict = {"dice": [], "iou": [], "hd95": [], "asd": []}
for _, sampled_batch in enumerate(testloader):
metrics = test_batch(images=sampled_batch[0], labels=sampled_batch[1], model=model)
for key in metric_dict:
metric_dict[key].extend(metrics[key])
dice_mean = np.mean(metric_dict["dice"])
iou_mean = np.mean(metric_dict["iou"])
hd95_values = np.array(metric_dict["hd95"])
hd95_mean = (
np.mean(hd95_values[np.isfinite(hd95_values)]) if np.any(np.isfinite(hd95_values)) else np.nan
)
asd_values = np.array(metric_dict["asd"])
asd_mean = np.mean(asd_values[np.isfinite(asd_values)]) if np.any(np.isfinite(asd_values)) else np.nan
writer.add_scalar("info/test_dice", dice_mean, iter_num)
writer.add_scalar("info/test_iou", iou_mean, iter_num)
writer.add_scalar("info/test_hd95", hd95_mean, iter_num)
writer.add_scalar("info/test_asd", asd_mean, iter_num)
# Clean up validation metrics
del metric_dict, hd95_values, asd_values
gc.collect()
# Switch back to train mode
model.train()
torch.cuda.empty_cache()
if iter_num >= max_iters:
iterator.close()
break
if iter_num >= max_iters:
iterator.close()
break
# Ensure a checkpoint is always saved at the end of pre-training
final_save = os.path.join(args.pre_snapshot_path, "unet_best_model.pth")
if not os.path.exists(final_save):
save_net_opt(model, optimizer, final_save)
writer.close()
return "Pre-Training Finished!"
def self_train(args):
# Model initialization
model = create_net(args.in_channels, args.num_classes)
ema_model = create_net(args.in_channels, args.num_classes, ema=True)
model.train()
ema_model.train()
model_summary({"model": model, "ema_model": ema_model})
# Data initialization
dm = dataset.DataModule(args)
trainloader, valloader, testloader = (dm.train_dataloader(), dm.val_dataloader(), dm.test_dataloader())
# Optimizer initialization
optimizer = torch.optim.SGD(model.parameters(), lr=args.learning_rate, momentum=0.9, weight_decay=args.weight_decay)
scheduler = torch.optim.lr_scheduler.CosineAnnealingLR(optimizer, T_max=args.self_iters)
# Load pre-trained model
pre_trained_model_path = os.path.join(args.pre_snapshot_path, "unet_best_model.pth")
load_net(ema_model, pre_trained_model_path)
load_net_opt(model, optimizer, pre_trained_model_path)
optimizer.param_groups[0]["lr"] = args.learning_rate # Reset learning rate
logging.info(f"Loaded pre-trained model from {pre_trained_model_path}")
writer = SummaryWriter(args.self_snapshot_path + "/log")
logging.info("Start self-training")
iter_num = 0
best_performance = 0.0
max_iters = args.self_iters
max_epoch = max_iters // len(trainloader) + 1
iterator = tqdm(range(max_epoch), ncols=70)
labeled_bs = args.labeled_bs
labeled_sub_bs, unlabeled_sub_bs = (int(args.labeled_bs // 2), int((args.batch_size - args.labeled_bs) // 2))
for _ in iterator:
for _, sampled_batch in enumerate(trainloader):
volume_batch, label_batch, _ = sampled_batch
volume_batch, label_batch = volume_batch.cuda(), label_batch.cuda()
# Images with true labels
l_img_a, l_img_b = (volume_batch[:labeled_sub_bs], volume_batch[labeled_sub_bs:labeled_bs])
l_lab_a, l_lab_b = (label_batch[:labeled_sub_bs], label_batch[labeled_sub_bs:labeled_bs])
# Images without true labels
u_img_a, u_img_b = (
volume_batch[labeled_bs : labeled_bs + unlabeled_sub_bs],
volume_batch[labeled_bs + unlabeled_sub_bs :],
)
u_lab_a, u_lab_b = (
label_batch[labeled_bs : labeled_bs + unlabeled_sub_bs],
label_batch[labeled_bs + unlabeled_sub_bs :],
)
# EMA model inference
with torch.no_grad():
p_out_a = ema_model(u_img_a) # Psuedo label for unlabeled image A
p_out_b = ema_model(u_img_b) # Psuedo label for unlabeled image B
p_out_a = get_cut_mask(p_out_a, nms=True)
p_out_b = get_cut_mask(p_out_b, nms=True)
mask, loss_mask = generate_mask(l_img_a)
u_input = u_img_a * mask + l_img_a * (1 - mask) # Unlabeled-based image with labeled image
l_input = l_img_b * mask + u_img_b * (1 - mask) # Labeled-based image with unlabeled image
u_lable = u_lab_a * mask + l_lab_a * (1 - mask) # Unlabeled-based label with labeled label
l_lable = l_lab_b * mask + u_lab_b * (1 - mask) # Labeled-based label with unlabeled label
u_outs = model(u_input) # Unlabeled-based output
l_outs = model(l_input) # Labeled-based output
u_outs_soft = torch.softmax(u_outs, dim=1)
l_outs_soft = torch.softmax(l_outs, dim=1)
loss_ce_a, loss_dice_a = mix_loss(u_outs, p_out_a, l_lab_a.squeeze(1), loss_mask, unlab=True)
loss_ce_b, loss_dice_b = mix_loss(l_outs, l_lab_b.squeeze(1), p_out_b, loss_mask)
mixed_ce = loss_ce_a + loss_ce_b
mixed_dice = loss_dice_a + loss_dice_b
loss = (mixed_ce + mixed_dice) / 2
optimizer.zero_grad()
loss.backward()
optimizer.step()
scheduler.step()
update_ema_variables(model, ema_model, 0.99)
iter_num += 1
if iter_num % 10 == 0:
writer.add_scalar("train/ce_loss", mixed_ce.item(), iter_num)
writer.add_scalar("train/dice_loss", mixed_dice.item(), iter_num)
writer.add_scalar("train/total_loss", loss.item(), iter_num)
writer.add_scalar("train/lr", scheduler.get_last_lr()[0], iter_num)
# Log images for visualization (first batch of every n iters)
if iter_num % 1000 == 0:
# Unlabeled-based images
u_input_viz = u_input[:4]
u_outs_viz = torch.argmax(u_outs_soft[:4], dim=1).unsqueeze(1)
u_labels_viz = u_lable[:4]
writer.add_images("self_train/unlabeled_based_images", u_input_viz, iter_num)
writer.add_images("self_train/unlabeled_based_outputs", u_outs_viz, iter_num)
writer.add_images("self_train/unlabeled_based_labels", u_labels_viz, iter_num)
# Labeled-based images
l_input_viz = l_input[:4]
l_outs_viz = torch.argmax(l_outs_soft[:4], dim=1).unsqueeze(1)
l_labels_viz = l_lable[:4]
writer.add_images("self_train/labeled_based_images", l_input_viz, iter_num)
writer.add_images("self_train/labeled_based_outputs", l_outs_viz, iter_num)
writer.add_images("self_train/labeled_based_labels", l_labels_viz, iter_num)
# Explicitly delete tensors to free up memory immediately
del volume_batch, label_batch, l_img_a, l_img_b, l_lab_a, l_lab_b
del u_img_a, u_img_b, u_lab_a, u_lab_b
del p_out_a, p_out_b, mask, loss_mask
del u_input, l_input, u_lable, l_lable
del u_outs, l_outs, u_outs_soft, l_outs_soft
del loss_ce_a, loss_dice_a, loss_ce_b, loss_dice_b
del mixed_ce, mixed_dice, loss
del sampled_batch
# Validation
if iter_num > 0 and iter_num % 200 == 0:
model.eval()
metric_dict = {"dice": [], "iou": [], "hd95": [], "asd": []}
for _, sampled_batch in enumerate(valloader):
metrics = test_batch(images=sampled_batch[0], labels=sampled_batch[1], model=model)
for key in metric_dict:
metric_dict[key].extend(metrics[key])
dice_mean = np.mean(metric_dict["dice"])
iou_mean = np.mean(metric_dict["iou"])
hd95_values = np.array(metric_dict["hd95"])
hd95_mean = (
np.mean(hd95_values[np.isfinite(hd95_values)]) if np.any(np.isfinite(hd95_values)) else np.nan
)
asd_values = np.array(metric_dict["asd"])
asd_mean = np.mean(asd_values[np.isfinite(asd_values)]) if np.any(np.isfinite(asd_values)) else np.nan
writer.add_scalar("info/val_dice", dice_mean, iter_num)
writer.add_scalar("info/val_iou", iou_mean, iter_num)
writer.add_scalar("info/val_hd95", hd95_mean, iter_num)
writer.add_scalar("info/val_asd", asd_mean, iter_num)
# Save best model
if dice_mean > best_performance:
best_performance = dice_mean
save_best = os.path.join(args.self_snapshot_path, "unet_best_model.pth")
torch.save(model.state_dict(), save_best)
logging.info(
f"\titer: {iter_num}, dice: {dice_mean * 100:.2f}, iou: {iou_mean * 100:.2f}, "
f"hd95: {hd95_mean:.2f}, asd: {asd_mean:.2f}"
)
# Testing
metric_dict = {"dice": [], "iou": [], "hd95": [], "asd": []}
for _, sampled_batch in enumerate(testloader):
metrics = test_batch(images=sampled_batch[0], labels=sampled_batch[1], model=model)
for key in metric_dict:
metric_dict[key].extend(metrics[key])
dice_mean = np.mean(metric_dict["dice"])
iou_mean = np.mean(metric_dict["iou"])
hd95_values = np.array(metric_dict["hd95"])
hd95_mean = (
np.mean(hd95_values[np.isfinite(hd95_values)]) if np.any(np.isfinite(hd95_values)) else np.nan
)
asd_values = np.array(metric_dict["asd"])
asd_mean = np.mean(asd_values[np.isfinite(asd_values)]) if np.any(np.isfinite(asd_values)) else np.nan
writer.add_scalar("info/test_dice", dice_mean, iter_num)
writer.add_scalar("info/test_iou", iou_mean, iter_num)
writer.add_scalar("info/test_hd95", hd95_mean, iter_num)
writer.add_scalar("info/test_asd", asd_mean, iter_num)
# Clean up validation metrics
del metric_dict, hd95_values, asd_values
gc.collect()
# Switch back to train mode
model.train()
torch.cuda.empty_cache()
if iter_num >= max_iters:
iterator.close()
break
if iter_num >= max_iters:
iterator.close()
break
# Ensure a checkpoint is always saved at the end of self-training
final_save = os.path.join(args.self_snapshot_path, "unet_best_model.pth")
if not os.path.exists(final_save):
torch.save(model.state_dict(), final_save)
writer.close()
return "Self-Training Finished!"
@torch.no_grad()
def test(args):
print("Start testing")
# Model initialization
model = create_net(args.in_channels, args.num_classes)
saved_best = os.path.join(args.self_snapshot_path, "unet_best_model.pth")
model.load_state_dict(torch.load(saved_best, weights_only=True), strict=False)
model.eval()
# Data initialization
dm = dataset.DataModule(args)
testloader = dm.test_dataloader()
# Create visualization folder
viz_path = args.test_snapshot_path + "/viz"
if os.path.exists(viz_path):
shutil.rmtree(viz_path)
os.makedirs(viz_path)
metric_dict = {"dice": [], "iou": [], "hd95": [], "asd": []}
for sampled_batch in tqdm(testloader, ncols=70):
metrics = test_batch(
images=sampled_batch[0],
labels=sampled_batch[1],
model=model,
viz=True,
viz_path=viz_path,
names=sampled_batch[2],
)
for key in metric_dict:
metric_dict[key].extend(metrics[key])
dice_mean, dice_std = np.mean(metric_dict["dice"]), np.std(metric_dict["dice"])
iou_mean, iou_std = np.mean(metric_dict["iou"]), np.std(metric_dict["iou"])
hd95_values = np.array(metric_dict["hd95"])
hd95_finite = hd95_values[np.isfinite(hd95_values)]
hd95_mean, hd95_std = (np.mean(hd95_finite), np.std(hd95_finite)) if len(hd95_finite) > 0 else (np.nan, np.nan)
asd_values = np.array(metric_dict["asd"])
asd_finite = asd_values[np.isfinite(asd_values)]
asd_mean, asd_std = (np.mean(asd_finite), np.std(asd_finite)) if len(asd_finite) > 0 else (np.nan, np.nan)
df = pd.DataFrame(
{
"Metric": ["Dice", "IoU", "HD95", "ASD"],
"Mean": [dice_mean, iou_mean, hd95_mean, asd_mean],
"Std": [dice_std, iou_std, hd95_std, asd_std],
}
)
result_str = (
"\n=========================================================\n"
+ df.to_string(index=False, float_format="%.8f")
+ "\n=========================================================\n"
)
logging.info(result_str)
# Create a sub-folder for single test with time and IoU
backup_folder = os.path.join(
args.test_snapshot_path, f"{datetime.datetime.now().strftime('%Y_%m_%d_%H_%M_%S')}_IoU={iou_mean * 100:.2f}"
)
os.makedirs(backup_folder)
# Backup the best model, log, and visualization
shutil.copy(saved_best, os.path.join(backup_folder, "unet_best_model.pth"))
shutil.move(viz_path, os.path.join(backup_folder, "viz"))
shutil.move(os.path.join(args.test_snapshot_path, "log.txt"), os.path.join(backup_folder, "log.txt"))
return "Testing Finished!"
if __name__ == "__main__":
if not args.deterministic:
cudnn.benchmark = True
cudnn.deterministic = False
else:
cudnn.benchmark = False
cudnn.deterministic = True
random.seed(args.seed)
np.random.seed(args.seed)
torch.manual_seed(args.seed)
torch.cuda.manual_seed(args.seed)
torch.cuda.manual_seed_all(args.seed)
# Logging
snapshot_path_list = [
f"runs/{args.exp}_unet_{args.dataset}_{args.labeled_ratio}_labeled/pre_train",
f"runs/{args.exp}_unet_{args.dataset}_{args.labeled_ratio}_labeled/self_train",
f"runs/{args.exp}_unet_{args.dataset}_{args.labeled_ratio}_labeled/test",
]
args.pre_snapshot_path = snapshot_path_list[0]
args.self_snapshot_path = snapshot_path_list[1]
args.test_snapshot_path = snapshot_path_list[2]
for path in snapshot_path_list:
if not os.path.exists(path):
os.makedirs(path)
if not args.test:
# Pre-train
setup_logging(args, args.pre_snapshot_path)
pre_train(args)
# Self-Train
setup_logging(args, args.self_snapshot_path)
self_train(args)
# Test
setup_logging(args, args.test_snapshot_path)
test(args)