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feat: remove affiliation data
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‎authors.yml‎

Lines changed: 3 additions & 113 deletions
Original file line numberDiff line numberDiff line change
@@ -6,35 +6,29 @@ project:
66
# RFC5 AUTHORS
77
- name: Josh Moore
88
github: joshmoore
9-
affiliation: Gerbi
109
orcid: 0000-0003-4028-811X
1110

1211
- name: John Bogovic
1312
github: bogovicj
14-
affiliation: HHMI
1513

1614
- name: Johannes Soltwedel
1715
github: jo-mueller
18-
affiliation: Gerbi
1916
orcid: "0000-0003-1273-2412"
2017

2118
- name: Luca Marconato
2219
github: LucaMarconato
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orcid: 0000-0003-3198-1326
24-
affiliation: EMBL
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- name: Davis Bennett
2723
github: d-v-b
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2925
- name: William Moore
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github: will-moore
31-
affiliation: Dundee
3227
orcid: 0000-0002-7264-8338
3328

3429
- name: Matt McCormick
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orcid: 0000-0001-9475-3756
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github: thewtex
37-
affiliation: fideus
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# RFC5 REVIEWERS
4034
- name: Dan Toloudis
@@ -43,19 +37,15 @@ project:
4337

4438
- name: Forest Collmann
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github: fcollman
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affiliation: allenbrain
4740

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- name: Nathalie Gaudreault
49-
affiliation: allencell
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orcid: "0000-0002-9220-5366"
5143

5244
- name: David Feng
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github: dyf
54-
affiliation: allenneural
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5647
- name: Jean-Marie Burel
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orcid: "0000-0002-1789-1861"
58-
affiliation: Dundee
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github: jburel
6050

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- name: Jason R. Swedlow
@@ -67,28 +57,23 @@ project:
6757
github: ilan-gold
6858
- name: Jeremy Maitin-Shepard
6959
github: jbms
70-
affiliation: google
7160
orcid: 0000-0001-8453-7961
7261
- name: David Stansby
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github: dstansby
74-
affiliation: UCL
7563
orcid: "0000-0002-1365-1908"
7664

7765
- name: Sébastien Besson
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orcid: "0000-0001-8783-1429"
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github: sbesson
80-
affiliation: Glencoe
8168

8269
# ngff-spec repo contributors
8370
# A
8471
- name: Chris Allan
85-
affiliation: Glencoe
8672
github: chris-allan
8773

8874
# B
8975
- name: Chris Barnes
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github: clbarnes
91-
affiliation: Gerbi
9277

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# C
9479
- name: Tommaso Comparin
@@ -97,67 +82,56 @@ project:
9782
# D
9883
- name: Lachlan Deakin
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github: lDeakin
100-
affiliation: ANU
10185
- name: Gideon Dunster
102-
affiliation: allencell
86+
orcid: "0000-0001-9050-0225"
10387

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# E
10589
- name: Jan Eglinger
10690
github: imagejan
107-
affiliation: FMI
10891

10992
# G
11093
- name: Guillaume Gay
11194
github: glyg
11295
orcid: "0000-0002-5444-5246"
113-
affiliation: francebioimaging
11496
- name: Xiao Gui
11597
github: xgui3783
11698

11799
# H
118100
- name: Yaroslav O. Halchenko
119101
github: yarikoptic
120-
affiliation: dartmouth
121102
- name: Matthew Hartley
122103
github: matthewh-ebi
123104
orcid: "0000-0001-6178-2884"
124-
affiliation: EMBL-EBI
125105
- name: Julian Hn
126106
github: julianhn
127107

128108
# I
129109
- name: Michael Innerberger
130110
github: minnerbe
131-
affiliations: HHMI
132111
orcid: 0000-0002-7001-8682
133112

134113
# K
135114
- name: Mark Kittisopikul
136115
github: mkitti
137-
affiliation: HHMI
138116
orcid: 0000-0002-9558-6248
139117

140118
# L
141119
- name: Talley Lambert
142120
github: tlambert03
143-
affiliation: HMS
144121
orcid: 0000-0002-2409-0181
145122
- name: Melissa Linkert
146123
github: melissalinkert
147-
affiliation: Glencoe
148124
- name: Ziwen Liu
149125
github: ziw-liu
150126
orcid: 0000-0001-7843-1992
151127
- name: Joel Lüthi
152128
github: jluethi
153-
affiliation: biovision
154129
orcid: 0000-0003-3023-170X
155130

156131
# N
157132
- name: Juan Nunez-Iglesias
158133
github: jni
159134
orcid: 0000-0002-7239-5828
160-
affiliation: Monash
161135

162136
# O/Ö
163137
- name: Bugra Özdemir
@@ -167,21 +141,17 @@ project:
167141
- name: Giovanni Palla
168142
github: giovp
169143
orcid: 0000-0002-8004-4462
170-
affiliation: HH_munich
171144
- name: Constantin Pape
172145
github: constantinpape
173146
orcid: 0000-0001-6562-7187
174-
affiliation: universität_göttingen
175147
- name: Eric Perlman
176148
github: perlman
177149
orcid: 0000-0001-5542-1302
178-
affiliation: yikes
179150
url: https://www.yikes.com/
180151

181152
# R
182153
- name: Sebastian Rhode
183154
github: sebi06
184-
affiliation: Zeiss
185155
- name: Norman Rzepka
186156
github: normanrz
187157
orcid: "0000-0002-8168-7929"
@@ -192,18 +162,15 @@ project:
192162
orcid: "0000-0002-4156-2849"
193163
- name: Doug Shepherd
194164
github: dpshepherd
195-
affiliation: ASU
196165

197166
# T
198167
- name: Christian Tischer
199168
github: tischi
200-
affiliation: EMBL
201169
orcid: "0000-0003-4105-1990"
202170

203171
# U
204172
- name: Virginie Uhlmann
205173
github: vuhlmann
206-
affiliation: biovision
207174
orcid: "0000-0002-2859-9241"
208175

209176
# V
@@ -220,92 +187,15 @@ project:
220187
- name: Jonas Windhager
221188
github: jwindhager
222189
orcid: "0000-0002-2111-5291"
223-
affiliation: uppsala
224190

225191
# Y
226192
- name: Kevin Yamauchi
227193
github: kevinyamauchi
228194
orcid: "0000-0002-7818-1388"
229-
affiliation: ETH
230195

231196
# Z
232197
- name: Yurii Zubov
233198
github: yuriyzubov
234-
affiliation: HHMI
235-
- name: Dženan Zukić
236-
github: dzenanz
237199

238-
affiliations:
239-
- id: allenbrain
240-
institution: "Allen Institute for Brain Science"
241-
ror: "https://ror.org/00dcv1019"
242-
- id: allenneural
243-
institution: "Allen Institute for Neural Dynamics"
244-
ror: "https://ror.org/04szwah67"
245-
- id: allencell
246-
institution: "Allen Institute for Cell Science"
247-
ror: "https://ror.org/05kg6bp11"
248-
- id: ASU
249-
institution: "Arizona State University"
250-
ror: "https://ror.org/03efmqc40"
251-
- id: ANU
252-
institution: "Australian National University"
253-
ror: "https://ror.org/019wvm592"
254-
- id: biovision
255-
institution: "BioVisionCenter, University of Zurich"
256-
- id: Zeiss
257-
institution: "Carl Zeiss Microscopy GmbH"
258-
- id: dartmouth
259-
institution: "Dartmouth College"
260-
ror: "https://ror.org/049s0rh22"
261-
- id: EMBL
262-
institution: "European Molecular Biology Laboratory (EMBL)"
263-
ror: "https://ror.org/03mstc592"
264-
- id: EMBL-EBI
265-
institution: "European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI)"
266-
ror: "https://ror.org/02catss52"
267-
- id: ETH
268-
institution: "ETH Zurich"
269-
ror: "https://ror.org/05a28rw58"
270-
- id: fideus
271-
institution: Fideus Labs
272-
url: https://fideus.io
273-
- id: FMI
274-
institution: "Friedrich Miescher Institute for Biomedical Research"
275-
ror: "https://ror.org/01bmjkv45"
276-
- id: francebioimaging
277-
institution: "France BioImaging"
278-
ror: "https://ror.org/01y7vt929"
279-
- id: Gerbi
280-
institution: "German Bioimaging - Society for Microscopy and Image Analysis e.V."
281-
ror: "https://ror.org/05tpnw772"
282-
- id: Glencoe
283-
institution: "Glencoe Software, Inc."
284-
- id: google
285-
institution: "Google"
286-
ror: "https://ror.org/00njsd438"
287-
- id: HMS
288-
institution: "Harvard Medical School"
289-
- id: HHMI
290-
institution: "Howard Hughes Medical Institute, Janelia Research Campus"
291-
ror: "https://ror.org/006w34k90"
292-
- id: HH_munich
293-
institution: "Helmholtz Zentrum München"
294-
ror: "https://ror.org/01y9bpm73"
295-
- id: Monash
296-
institution: "Monash Medical Centre"
297-
ror: "https://ror.org/036s9kg65"
298-
- id: UCL
299-
institution: "University College London"
300-
ror: "https://ror.org/02jx3x895"
301-
- id: Dundee
302-
institution: "University of Dundee"
303-
ror: "https://ror.org/03h2bxq36"
304-
- id: universität_göttingen
305-
institution: "University of Göttingen"
306-
ror: "https://ror.org/01y9bpm73"
307-
- id: uppsala
308-
institution: "Uppsala University"
309-
ror: "https://ror.org/048a87296"
310-
- id: yikes
311-
institution: "Yikes, LLC."
200+
- name: Dženan Zukić
201+
github: dzenanz

‎pre_build.py‎

Lines changed: 9 additions & 9 deletions
Original file line numberDiff line numberDiff line change
@@ -188,18 +188,18 @@ def render_authors_md():
188188
for idx, author in enumerate(authors):
189189
name = author['name']
190190

191-
if "affiliation" in author:
192-
affiliation_id = author['affiliation']
193-
aff = affiliations[affiliation_id]
191+
# if "affiliation" in author:
192+
# affiliation_id = author['affiliation']
193+
# aff = affiliations[affiliation_id]
194194

195-
if affiliation_id not in affiliation_lookup:
196-
affiliation_lookup[affiliation_id] = affiliation_id_counter
197-
institution_name = aff['institution']
198-
markdown_affiliations += f"$^{{{affiliation_id_counter}}}${institution_name}, "
195+
# if affiliation_id not in affiliation_lookup:
196+
# affiliation_lookup[affiliation_id] = affiliation_id_counter
197+
# institution_name = aff['institution']
198+
# markdown_affiliations += f"$^{{{affiliation_id_counter}}}${institution_name}, "
199199

200-
affiliation_id_counter += 1
200+
# affiliation_id_counter += 1
201201

202-
name += f"$^{{{affiliation_lookup[affiliation_id]}}}$"
202+
# name += f"$^{{{affiliation_lookup[affiliation_id]}}}$"
203203

204204
if "orcid" in author:
205205
name += f" [<img src=\"{orcid_icon}\" alt=\"ORCID iD\" height=12 width=12 style=\"vertical-align: middle;\"/>](https://orcid.org/{author['orcid']})"

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