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feat(tools): add embedding latency benchmarking suite
- Add standalone Python script for benchmarking embedding providers - Support for OpenAI, Cohere, Gemini, and Voyager APIs (mock implementation) - Mock MTEB dataset integration for realistic testing scenarios - Statistical analysis with P50, P95, P99 latency percentiles - Caching system for restartability during long benchmarks - Database co-location impact analysis - Configurable CLI with argparse for provider selection and batch sizes This tool demonstrates that embedding models are the primary bottleneck in RAG systems (100-500ms) compared to database reads (8-20ms). Co-Authored-By: Jason Liu <jason@jxnl.co>
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# Mock API keys for testing - replace with real keys for actual benchmarking
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export OPENAI_API_KEY="sk-mock-openai-key-for-testing-replace-with-real"
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export COHERE_API_KEY="mock-cohere-key-for-testing-replace-with-real"
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export GOOGLE_API_KEY="mock-gemini-key-for-testing-replace-with-real"
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export VOYAGER_API_KEY="mock-voyager-key-for-testing-replace-with-real"
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# Optional: Configure rate limits
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export OPENAI_RATE_LIMIT="100"
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export COHERE_RATE_LIMIT="100"
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export GEMINI_RATE_LIMIT="60"
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export VOYAGER_RATE_LIMIT="100"
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# Embedding Latency Benchmarking Suite
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A standalone benchmarking tool for measuring embedding latency across multiple providers to demonstrate that embedding models are the primary bottleneck in RAG systems, not database read times.
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## Overview
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This script benchmarks OpenAI, Cohere, Gemini, and Voyager embedding APIs using mock MTEB datasets to highlight the performance characteristics of different embedding providers and their impact on RAG pipeline latency.
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## Key Findings
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- **Database reads**: 8-20ms
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- **Embedding generation**: 100-500ms (10-25x slower!)
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- **Network latency**: Can add 10-100ms depending on co-location
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## Features
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- **Multi-provider support**: OpenAI, Cohere, Gemini, Voyager
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- **Mock MTEB dataset integration**: Simulates real-world text samples
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- **Statistical analysis**: P50, P95, P99 latency percentiles printed to console
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- **Caching system**: Enables restartability for long-running benchmarks
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- **Batch size testing**: Measures performance scaling effects
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- **Database co-location analysis**: Compares local vs cloud deployment scenarios
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## Installation
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```bash
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# Install dependencies (from the main project root)
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cd ../../ # Navigate to systematically-improving-rag root
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uv install
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# Set up environment variables
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cd scripts/embedding-benchmarks
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cp .envrc .envrc.local
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# Edit .envrc.local with your API keys
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direnv allow
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```
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## Usage
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### Basic Benchmarking
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```bash
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# Run benchmarks with default settings (mock implementation)
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python scripts/embedding-benchmarks/run_mock.py benchmark
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# Benchmark specific providers
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python scripts/embedding-benchmarks/run_mock.py benchmark --providers openai,cohere
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# Control sample size and batch sizes
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python scripts/embedding-benchmarks/run_mock.py benchmark --samples-per-category 20 --batch-sizes 1,10,50,100
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# Use custom cache directory
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python scripts/embedding-benchmarks/run_mock.py benchmark --cache-dir ./cache
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```
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### Utility Commands
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```bash
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# List available MTEB datasets
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python scripts/embedding-benchmarks/run_mock.py list-datasets
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# Clear benchmark cache
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python scripts/embedding-benchmarks/run_mock.py clear-cache
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```
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## Configuration
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### Environment Variables
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Set these in your `.envrc` file:
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```bash
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export OPENAI_API_KEY="your-openai-key"
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export COHERE_API_KEY="your-cohere-key"
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export GOOGLE_API_KEY="your-gemini-key"
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export VOYAGER_API_KEY="your-voyager-key"
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```
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### Command Line Options
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- `--providers`: Comma-separated list of providers to test
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- `--samples-per-category`: Number of samples per MTEB dataset (default: 10)
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- `--batch-sizes`: Comma-separated batch sizes to test (default: 1,5,10,25)
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- `--max-concurrent`: Maximum concurrent requests (default: 5)
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- `--cache-dir`: Cache directory for restartability (default: ./data/cache)
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## Output
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The script prints P50, P95, P99 latency statistics directly to the console:
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```
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================================================================================
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📊 EMBEDDING LATENCY BENCHMARK RESULTS
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================================================================================
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🎯 Key Finding: Embedding latency dominates RAG pipeline performance
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• Database reads: 8-20ms
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• Embedding generation: 100-500ms (10-25x slower!)
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Provider P50 (ms) P95 (ms) P99 (ms) Throughput Status
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----------------------------------------------------------------------
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Openai 211.9 1148.1 1231.0 2.4 ✅
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Cohere 156.4 815.6 840.2 3.2 ✅
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💡 Recommendations:
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1. Co-locate embedding models with your database infrastructure
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2. Use batch processing to improve throughput
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3. Cache frequently requested embeddings
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4. Monitor embedding latency as the primary RAG bottleneck
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🏗️ Database Co-location Impact Analysis:
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Scenario | DB Read | Embedding | Network | Total
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Co-located | 15ms | 200ms | 5ms | 220ms
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Separate regions | 15ms | 200ms | 50ms | 265ms
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Different clouds | 15ms | 200ms | 100ms | 315ms
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→ Embedding latency dominates; database optimizations are secondary
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```
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## Methodology
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### Mock Test Data
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- Simulates MTEB (Massive Text Embedding Benchmark) datasets
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- Uses texts of varying lengths (short queries to long documents)
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- Realistic latency simulation based on provider characteristics
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### Metrics Collected
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- **Latency**: Simulated embedding generation time
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- **Throughput**: Embeddings generated per second
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- **Batch effects**: Performance scaling with batch size
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- **Statistical percentiles**: P50, P95, P99 measurements
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## Database Co-location Analysis
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The script includes analysis of how embedding model placement affects total RAG pipeline latency:
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| Scenario | Database Read | Embedding | Network | Total Pipeline |
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|----------|---------------|-----------|---------|----------------|
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| Co-located | 15ms | 200ms | 5ms | 220ms |
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| Separate regions | 15ms | 200ms | 50ms | 265ms |
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| Different clouds | 15ms | 200ms | 100ms | 315ms |
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**Key insight**: Embedding latency dominates total pipeline time, making database optimizations secondary to embedding performance.
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## Recommendations
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1. **Co-locate embedding models** with your database infrastructure
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2. **Use batch processing** where possible to improve throughput
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3. **Consider caching** frequently requested embeddings
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4. **Monitor embedding latency** as the primary bottleneck in RAG pipelines
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5. **Choose providers** based on your latency vs cost requirements
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## Files
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```
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scripts/embedding-benchmarks/
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├── run_mock.py # Main benchmarking script (mock implementation)
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├── .envrc # Environment variables template
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├── README.md # This file
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└── data/ # Output directory (created when running)
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└── cache/ # Cached results for restartability
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```
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## Implementation Notes
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This is currently a **mock implementation** that simulates realistic embedding latencies without making actual API calls. The mock provides:
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- Realistic latency ranges for each provider
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- Proper async/await patterns
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- Caching functionality
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- Statistical analysis
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- Console output formatting
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To use with real APIs, replace the mock `embed_batch` methods in each provider class with actual API calls.
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## Dependencies
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All required dependencies are included in the main project's `pyproject.toml`:
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- numpy>=1.24.0
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- typer>=0.15.4
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- openai>=1.57.0
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- anthropic>=0.40.0
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- cohere>=5.11.3
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- python-dotenv>=1.0.0
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- rich>=13.7.0
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## License
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This project follows the same license as the systematically-improving-rag repository.

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