Update test CI

Author: kaitj

.github/scripts/run_benchmarks.py

@@ -14,7 +14,7 @@ def main():
     pytest.main(
         [
             "-m",
-            "benchmark",
+            "benchmark and not cloud",
             "--benchmark-save-data",
             f"--benchmark-json={args.output}",
             "--benchmark-time-unit=ms",

.github/workflows/ci.yaml

@@ -42,16 +42,16 @@ jobs:
         with:
           python-version: ${{ matrix.python-version }}
 
-      - name: Run tests without cloudpathlib
+      - name: Run non-cloud tests
         run: |
           uv run pytest \
-            -m "not cloud" \
+            -m "not cloud and not benchmark" \
             --junitxml=pytest-cloudless.xml \
             --cov-report=xml:coverage.xml \
-            --cov bids2table \
+            --cov=bids2table \
             tests
 
-      - name: Run tests with cloudpathlib
+      - name: Run cloud tests
         run: |
           uv run --extra cloud pytest \
             -m "cloud" \

tests/benchmarks/test_index.py

@@ -66,7 +66,8 @@ def _teardown(index_fpath: Path):
     )
 
 
-# @pytest.mark.benchmark
+@pytest.mark.benchmark
+@pytest.mark.cloud
 def test_openneuro(benchmark: BenchmarkFixture, tmp_path: Path) -> None:
     """Benchmark b2t2 with a subset of datasets on OpenNeuro."""
     workers = 4