diff --git a/prot_pkl_check.py b/prot_pkl_check.py deleted file mode 100644 index 61a6a73..0000000 --- a/prot_pkl_check.py +++ /dev/null @@ -1,15 +0,0 @@ -import pickle -import pandas as pd - -prots = pickle.load(open("datasets/glass/results/prot_data/wdln_1479ac8c.pkl", "rb")) -inter = pd.read_csv("datasets/glass/results/split_data/rarn_7cbd3f55.tsv", sep="\t") - -print(type(prots)) -print("prots shape:", getattr(prots, "shape", None)) -print("prots columns:", getattr(prots, "columns", None)) -print("first few index values:", list(prots.index[:5])) - -sub = prots[prots.index.isin(inter["Target_ID"].unique())] -print("filtered prots shape:", sub.shape) -print("filtered index sample:", list(sub.index[:5])) -print("is empty?", sub.empty)