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@@ -34,7 +34,6 @@ Please refer to [Pollard et al. 2006](https://www.nature.com/articles/nature0511
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4.) adjust the nextflow config file to match your operating environment (we have provided a sample config for an SGE system)
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* change the path for `process.conda` so it matches the location of your installation of the `ARs_conda_env`
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* adjust the path for `errorDir`
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5.) run the pipeline (sample command: `nextflow run call_ARs_zoo.nf -w "hars_workdir/" -profile sge -params-file zoonomia_example_human.yml`)
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