Merge branch 'dev'

Author: evanbiederstedt

CHANGELOG.md

@@ -1,5 +1,8 @@
 # Changelog
 
+## [1.0.5] - 2022 September 29
+* Fixed `/src/leidenalg/include/MutableVertexPartition.h`, Fedora-related 'GLIBCXX_ASSERTIONS' error
+
 ## [1.0.4] - 2022 September 25
 * Remove 'Matrix.utils' as dependency
 

DESCRIPTION

@@ -1,7 +1,7 @@
 Package: leidenAlg
 Type: Package
 Title: Implements the Leiden Algorithm via an R Interface
-Version: 1.0.4
+Version: 1.0.5
 Authors@R: c(person("Peter", "Kharchenko", email = "Peter_Kharchenko@hms.harvard.edu", role = c("aut")), person("Viktor", "Petukhov", email = "viktor.s.petukhov@ya.ru", role = c("aut")), person("V.A.", "Traag", email = "v.a.traag@cwts.leidenuniv.nl", role = c("ctb")), person("Gábor", "Csárdi", email = "sardi.gabor@gmail.com", role = c("ctb")), person("Tamás", "Nepusz", email = "ntamas@gmail.com", role = c("ctb")), person("Minh Van", "Nguyen", email = "nguyenminh2@gmail.com", role = c("ctb")), person("Evan", "Biederstedt", email = "evan.biederstedt@gmail.com", role=c("cre", "aut")))
 Description: An R interface to the Leiden algorithm, an iterative community detection algorithm on networks. The algorithm is designed to converge to a partition in which all subsets of all communities are locally optimally assigned, yielding communities guaranteed to be connected. The implementation proves to be fast, scales well, and can be run on graphs of millions of nodes (as long as they can fit in memory). The original implementation was constructed as a python interface "leidenalg" found here: <https://github.com/vtraag/leidenalg>. The algorithm was originally described in Traag, V.A., Waltman, L. & van Eck, N.J. "From Louvain to Leiden: guaranteeing well-connected communities". Sci Rep 9, 5233 (2019) <doi:10.1038/s41598-019-41695-z>.
 License: GPL-3 

README.md

@@ -84,5 +84,5 @@ If you find `leidenAlg` useful for your publication, please cite:
 ```
 Peter Kharchenko, Viktor Petukhov and Evan Biederstedt (2021).
 leidenAlg: Implements the Leiden Algorithm via an R Interface. R
-package version 1.0.3. https://github.com/kharchenkolab/leidenAlg
+package version 1.0.5. https://github.com/kharchenkolab/leidenAlg
 ```

src/leidenalg/include/MutableVertexPartition.h

@@ -89,9 +89,10 @@ class MutableVertexPartition
 
     void from_partition(MutableVertexPartition* partition);
 
-    inline double total_weight_in_comm(size_t comm) { return this->_total_weight_in_comm[comm]; };
-    inline double total_weight_from_comm(size_t comm) { return this->_total_weight_from_comm[comm]; };
-    inline double total_weight_to_comm(size_t comm) { return this->_total_weight_to_comm[comm]; };
+    inline double total_weight_in_comm(size_t comm)   { return comm < _n_communities ? this->_total_weight_in_comm[comm] : 0.0; };
+    inline double total_weight_from_comm(size_t comm) { return comm < _n_communities ? this->_total_weight_from_comm[comm] : 0.0; };
+    inline double total_weight_to_comm(size_t comm)   { return comm < _n_communities ? this->_total_weight_to_comm[comm] : 0.0; };
+
     inline double total_weight_in_all_comms() { return this->_total_weight_in_all_comms; };
     inline size_t total_possible_edges_in_all_comms() { return this->_total_possible_edges_in_all_comms; };