scrapper/DESCRIPTION at master · libscran/scrapper · GitHub

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Package: scrapper
Version: 1.5.19
Date: 2026-04-24
Authors@R: person("Aaron", "Lun", role=c("cre", "aut"), email="infinite.monkeys.with.keyboards@gmail.com")
Title: Bindings to C++ Libraries for Single-Cell Analysis
Description:
    Implements R bindings to C++ code for analyzing single-cell (expression) data, mostly from various libscran libraries.
    Each function performs an individual step in the single-cell analysis workflow, ranging from quality control to clustering and marker detection.
    Additional wrappers are provided for easy construction of end-to-end workflows involving Bioconductor objects like SingleCellExperiments.
License: MIT + file LICENSE
Imports:
    methods,
    Rcpp,
    beachmat (>= 2.25.1),
    S4Vectors,
    SparseArray,
    DelayedArray,
    BiocNeighbors (>= 1.99.0),
    parallel
Suggests:
    testthat,
    knitr,
    rmarkdown,
    BiocStyle,
    Matrix,
    IRanges,
    SummarizedExperiment,
    SingleCellExperiment,
    scRNAseq,
    org.Mm.eg.db,
    scater,
    igraph
LinkingTo:
    Rcpp,
    assorthead (>= 1.5.16),
    beachmat,
    BiocNeighbors,
    Rigraphlib
biocViews:
    Normalization,
    RNASeq,
    Software,
    GeneExpression,
    Transcriptomics,
    SingleCell,
    BatchEffect,
    QualityControl,
    DifferentialExpression,
    FeatureExtraction,
    PrincipalComponent,
    Clustering
SystemRequirements: C++17, GNU make
URL: https://github.com/libscran/scrapper
BugReports: https://github.com/libscran/scrapper/issues
VignetteBuilder: knitr
Encoding: UTF-8
RoxygenNote: 7.3.3