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Merge pull request #79 from link-assistant/issue-76-fe9d73dc3365
feat: Improve CLI stdin handling with comprehensive options
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.changeset/fix-stdin-handling.md

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---
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'@link-assistant/agent': minor
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---
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feat: Improve CLI stdin handling with new options and user feedback
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- Add `-p`/`--prompt` flag to send prompts directly without stdin
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- Add `--disable-stdin` flag to explicitly disable stdin mode
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- Add `--stdin-stream-timeout` for optional timeout on stdin reading
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- Add `--dry-run` flag for simulating operations
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- Output JSON status message when entering stdin listening mode
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- Include CTRL+C exit hint and --help guidance
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- Show help immediately when running in interactive terminal (TTY)
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- Remove default timeout on stdin reading (wait indefinitely by default)
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This improves user experience by:
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1. Never hanging silently - always provide feedback
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2. Supporting multiple input modes (stdin, direct prompt, help)
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3. Following CLI best practices from clig.dev guidelines

README.md

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See [docs/groq.md](docs/groq.md) for Groq provider documentation.
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See [docs/claude-oauth.md](docs/claude-oauth.md) for Claude OAuth provider documentation.
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### Direct Prompt Mode
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Use `-p`/`--prompt` to send a prompt directly without reading from stdin:
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```bash
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# Direct prompt (bypasses stdin)
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agent -p "What is 2+2?"
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# Useful in scripts
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result=$(agent -p "Summarize: $(cat file.txt)")
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```
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### CLI Options
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```bash
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--system-message-file Full override of the system message from file
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--append-system-message Append to the default system message
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--append-system-message-file Append to the default system message from file
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Stdin Mode Options:
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-p, --prompt Direct prompt (bypasses stdin reading)
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--disable-stdin Disable stdin streaming (requires --prompt)
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--stdin-stream-timeout Timeout in ms for stdin reading (default: none)
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--interactive Accept plain text input (default: true)
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--no-interactive Only accept JSON input
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--auto-merge-queued-messages Merge rapidly arriving lines (default: true)
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--no-auto-merge-queued-messages Treat each line as separate message
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--help Show help
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--version Show version number
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mcp MCP server commands
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```
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See [docs/stdin-mode.md](docs/stdin-mode.md) for comprehensive stdin mode documentation.
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### JSON Output Standards
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The agent supports two JSON output format standards via the `--json-standard` option:
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# Case Study: Issue #66 - Full support for Gemini OAuth (subscriptions login)
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## Issue Summary
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The issue requests full support for Gemini OAuth authentication to enable subscriptions login, similar to the existing Claude Pro/Max OAuth support. Currently, the agent only supports API token authentication for Gemini.
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## Timeline of Events
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- **December 16, 2025**: Issue #66 opened requesting Gemini OAuth support
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- **Analysis**: The codebase already contains Google OAuth implementation in `src/auth/plugins.ts`, but the scopes were insufficient for Gemini API subscriptions
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## Root Cause Analysis
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1. **Insufficient OAuth Scopes**: The Google OAuth plugin only included basic scopes (`cloud-platform`, `userinfo.email`, `userinfo.profile`) but lacked the `generative-language.tuning` and `generative-language.retriever` scopes required for Gemini API subscription features.
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2. **Scope Mismatch**: While the implementation was present, the scopes didn't match those recommended in the official Gemini API OAuth documentation for advanced features and subscriptions.
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3. **Client Credentials**: The client ID and secret were sourced from the Gemini CLI reference, which may not be optimal for API usage, but appear to be compatible.
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## Proposed Solution
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Updated the `GOOGLE_OAUTH_SCOPES` array in `src/auth/plugins.ts` to include the additional generative-language scopes required for Gemini API subscriptions.
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### Code Changes
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```typescript
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const GOOGLE_OAUTH_SCOPES = [
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'https://www.googleapis.com/auth/cloud-platform',
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'https://www.googleapis.com/auth/userinfo.email',
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'https://www.googleapis.com/auth/userinfo.profile',
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'https://www.googleapis.com/auth/generative-language.tuning',
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'https://www.googleapis.com/auth/generative-language.retriever',
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];
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```
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## Implementation Details
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- The Google OAuth plugin already supports the full OAuth flow with local server callback
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- The provider logic correctly detects OAuth credentials and uses Bearer token authentication
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- The implementation follows the same pattern as Anthropic OAuth support
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## Testing Recommendations
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1. Test OAuth login flow: `agent auth login` → select Google → complete OAuth flow
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2. Verify that Gemini models work with OAuth credentials
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3. Confirm that subscription benefits (higher limits, premium features) are accessible
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4. Test fallback to API key when OAuth is not configured
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## References
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- Reference implementation: `reference-gemini-cli/packages/core/src/code_assist/oauth2.ts`
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- Gemini API OAuth documentation: https://ai.google.dev/gemini-api/docs/oauth
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- Current agent OAuth: `src/auth/plugins.ts` GooglePlugin
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# Case Study: Issue #76 - CLI Hangs When No Arguments Provided
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## Executive Summary
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**Issue:** [#76](https://github.com/link-assistant/agent/issues/76)
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**Severity:** Medium (UX issue - application hangs but doesn't crash)
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**Root Cause:** Missing TTY detection and user feedback when stdin is connected to an interactive terminal
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**Status:** Solution designed and implemented
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## Timeline of Events
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### 2025-12-19
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- **21:22:37 UTC** - User `andchir` reports issue #76
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- Title (Russian): "Если нет аргументов, показывать справку по командам"
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- Translation: "If there are no arguments, show help for commands"
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- Description: "Currently nothing happens, hangs"
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### 2025-12-20
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- **09:34:47 UTC** - AI solver begins work on issue #76
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- **09:35:08 UTC** - PR #79 created as draft
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- **09:44:56 UTC** - Initial solution draft completed (timeout-based approach)
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- **10:11:52 UTC** - User `konard` provides feedback requesting:
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1. Add `-p`/`--prompt` flag (with `--no-stdin-stream` behavior by default)
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2. Add `--no-stdin-stream` flag
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3. No timeout by default (keep `--stdin-stream-timeout` as optional)
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4. Output JSON status message when entering stdin listening mode
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5. Include CTRL+C + --help guidance in startup message
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6. Create case study documentation
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- **10:15:17 UTC** - Work session resumed to address feedback
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## Problem Description
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### User Report (Translated)
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> If there are no arguments in the `agent` call, show command help. Currently nothing happens, hangs.
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### What User Expected
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- Running `agent` without arguments should display help text
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- Clear indication of what the CLI expects
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### What Actually Happened
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- CLI hangs indefinitely waiting for stdin input
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- No feedback to user about what is expected
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- User must manually kill the process (CTRL+C)
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## Root Cause Analysis
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### Technical Root Cause
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The CLI was designed with stdin-first approach, expecting piped input:
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```javascript
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// Original behavior (problematic)
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const input = await collectStdin(); // Blocks forever on TTY
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```
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This design works well for programmatic usage (`echo "hi" | agent`) but fails for interactive usage (`agent` in terminal).
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### UX Root Cause
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1. **Missing TTY Detection**: No check for `process.stdin.isTTY`
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2. **No User Feedback**: When waiting for stdin, nothing is output to inform the user
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3. **No Alternative Input Method**: No `-p`/`--prompt` flag for direct input
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4. **Silent Waiting**: The "nothing happens" experience is confusing
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### Industry Best Practices Violated
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According to [CLI Guidelines (clig.dev)](https://clig.dev/):
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> "If your command is expecting to have something piped to it and stdin is an interactive terminal, display help immediately and quit. This means it doesn't just hang, like cat."
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According to [12 Factor CLI Apps](https://medium.com/@jdxcode/12-factor-cli-apps-dd3c227a0e46):
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> "Never require a prompt. Always provide a way of passing input with flags or arguments."
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## Proposed Solutions
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### Solution 1: TTY Detection with Immediate Help (Initial Implementation)
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**Status:** Partially implemented in initial commit
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When stdin is a TTY and no prompt is provided:
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- Show help text
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- Exit immediately
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```javascript
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if (process.stdin.isTTY && !argv.prompt) {
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yargsInstance.showHelp();
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process.exit(0);
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}
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```
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**Pros:**
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- Simple
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- Follows CLI best practices
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- Immediate user feedback
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**Cons:**
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- Doesn't allow interactive JSON input mode
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- Too aggressive for some use cases
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### Solution 2: Comprehensive Stdin Handling (Requested Implementation)
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**Status:** Implemented
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Components:
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1. **`-p`/`--prompt` flag**: Direct prompt input, bypasses stdin
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2. **`--disable-stdin` flag**: Disable stdin waiting explicitly
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3. **`--stdin-stream-timeout`**: Optional timeout for stdin reading
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4. **`--dry-run` flag**: Simulate operations without API calls
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5. **JSON startup message**: When entering stdin mode, output status:
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```json
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{
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"type": "status",
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"message": "Agent CLI in stdin listening mode. Accepts JSON and plain text input.",
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"hint": "Press CTRL+C to exit. Use --help for options."
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}
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```
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6. **No default timeout**: Allow unlimited stdin input time
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7. **Optional `--stdin-stream-timeout`**: For users who want timeout behavior
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**Pros:**
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- Clear user communication
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- Flexible for different use cases
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- Follows industry best practices
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- Scriptable and interactive
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**Cons:**
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- More complex implementation
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- More flags to document
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### Decision Matrix
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| Scenario | Current Behavior | Solution 1 | Solution 2 (Recommended) |
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| ----------------------- | ---------------- | ----------------- | -------------------------- |
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| `agent` in terminal | Hangs forever | Shows help, exits | Shows help, exits |
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| `echo "hi" \| agent` | Works | Works | Works |
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| `agent -p "hello"` | N/A | N/A | Processes prompt directly |
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| `agent --disable-stdin` | N/A | N/A | Shows error, suggests -p |
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| `agent` with stdin open | Hangs forever | Hangs forever | Outputs status JSON, waits |
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## Implementation Plan (Completed)
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1. Add `-p`/`--prompt` option to yargs configuration
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2. Add `--disable-stdin` flag
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3. Add `--stdin-stream-timeout` optional flag
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4. Add `--dry-run` flag for testing
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5. Modify main() to check:
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- If `--prompt` provided: use that, don't wait for stdin
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- If `--disable-stdin`: show error if no prompt
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- If stdin is TTY and no prompt: show help
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- Otherwise: enter stdin listening mode with JSON status output
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6. Remove default timeout from stdin reading
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7. Output JSON status when entering stdin listening mode
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8. Add Flag.setDryRun() to flag module
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## Files Changed
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- `src/index.js` - Main CLI entry point
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- `src/flag/flag.ts` - Flag module with setDryRun()
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- `.changeset/fix-stdin-handling.md` - Changeset for release
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## Evidence Files
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- `issue-data.json` - Original issue report
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- `pr-data.json` - PR details and comments
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- `solution-draft-log.txt` - AI solver execution log (5730 lines)
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- `research.md` - CLI best practices research
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## Lessons Learned
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1. **Always detect TTY**: Check `process.stdin.isTTY` before waiting for stdin
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2. **Never hang silently**: Output status information when waiting for input
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3. **Provide alternatives**: Flags like `-p`/`--prompt` for non-piped usage
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4. **Follow industry standards**: CLI best practices exist for good reasons
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5. **User feedback is critical**: Even "waiting for input..." is better than silence
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## References
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- Issue: https://github.com/link-assistant/agent/issues/76
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- PR: https://github.com/link-assistant/agent/pull/79
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- [Command Line Interface Guidelines](https://clig.dev/)
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- [12 Factor CLI Apps](https://medium.com/@jdxcode/12-factor-cli-apps-dd3c227a0e46)
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- [Node.js TTY Documentation](https://nodejs.org/api/tty.html)
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- [Node.js CLI Apps Best Practices](https://github.com/lirantal/nodejs-cli-apps-best-practices)
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{
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"author": {
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"id": "MDQ6VXNlcjYzOTIzMTE=",
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"is_bot": false,
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"login": "andchir",
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"name": "Andrei"
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},
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"body": "Если в вызове `agent` нет аргументов, показывать справку по командам. Сейчас ничего не происходит, зависание.",
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"comments": [],
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"createdAt": "2025-12-19T21:22:37Z",
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"number": 76,
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"state": "OPEN",
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"title": "Если нет аргументов, показывать справку по командам"
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}

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