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style: rustfmt fixups (Move #4)
1 parent ee3448c commit fe594b9

2 files changed

Lines changed: 38 additions & 7 deletions

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examples/custom_pileup_analytics.rs

Lines changed: 6 additions & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -39,7 +39,12 @@ fn main() {
3939
for column in engine {
4040
let col: PileupColumn = column.expect("pileup column");
4141
total_depth += col.depth() as u64;
42-
println!("{}\t{}\t{}", col.locus.pos.0, col.ref_base as char, col.depth());
42+
println!(
43+
"{}\t{}\t{}",
44+
col.locus.pos.0,
45+
col.ref_base as char,
46+
col.depth()
47+
);
4348
}
4449
println!("# total observed depth across covered positions: {total_depth}");
4550
}

tests/frontdoor_demo.rs

Lines changed: 32 additions & 6 deletions
Original file line numberDiff line numberDiff line change
@@ -35,7 +35,11 @@ fn readme_inhouse_contract_demo_runs_end_to_end() {
3535
let fa = root.join("examples/data/illumina_toy/reference.fa");
3636
let bam = root.join("examples/data/illumina_toy/alignments.bam");
3737
assert!(fa.exists(), "bundled reference missing: {}", fa.display());
38-
assert!(bam.exists(), "bundled alignments missing: {}", bam.display());
38+
assert!(
39+
bam.exists(),
40+
"bundled alignments missing: {}",
41+
bam.display()
42+
);
3943

4044
let dir = unique_dir();
4145
let idx = dir.join("toy.idx");
@@ -50,7 +54,11 @@ fn readme_inhouse_contract_demo_runs_end_to_end() {
5054
"--output",
5155
idx.to_str().unwrap(),
5256
]);
53-
assert!(out.status.success(), "index: {}", String::from_utf8_lossy(&out.stderr));
57+
assert!(
58+
out.status.success(),
59+
"index: {}",
60+
String::from_utf8_lossy(&out.stderr)
61+
);
5462

5563
let out = run(&[
5664
"sort",
@@ -59,10 +67,24 @@ fn readme_inhouse_contract_demo_runs_end_to_end() {
5967
"--output",
6068
sorted.to_str().unwrap(),
6169
]);
62-
assert!(out.status.success(), "sort: {}", String::from_utf8_lossy(&out.stderr));
70+
assert!(
71+
out.status.success(),
72+
"sort: {}",
73+
String::from_utf8_lossy(&out.stderr)
74+
);
6375

64-
let out = run(&["plan", "--index", idx.to_str().unwrap(), "--budget-mb", "512"]);
65-
assert!(out.status.success(), "plan: {}", String::from_utf8_lossy(&out.stderr));
76+
let out = run(&[
77+
"plan",
78+
"--index",
79+
idx.to_str().unwrap(),
80+
"--budget-mb",
81+
"512",
82+
]);
83+
assert!(
84+
out.status.success(),
85+
"plan: {}",
86+
String::from_utf8_lossy(&out.stderr)
87+
);
6688
assert!(String::from_utf8_lossy(&out.stdout).contains("predicted peak"));
6789

6890
let out = run(&[
@@ -85,7 +107,11 @@ fn readme_inhouse_contract_demo_runs_end_to_end() {
85107
assert!(manifest.exists(), "receipt sidecar must be written");
86108

87109
let out = run(&["verify", "--manifest", manifest.to_str().unwrap()]);
88-
assert!(out.status.success(), "verify: {}", String::from_utf8_lossy(&out.stderr));
110+
assert!(
111+
out.status.success(),
112+
"verify: {}",
113+
String::from_utf8_lossy(&out.stderr)
114+
);
89115
assert!(String::from_utf8_lossy(&out.stdout).contains("verify: OK"));
90116

91117
std::fs::remove_dir_all(&dir).ok();

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