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Himpu Marbona
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Update MLRK and Optimized MU Solver
This commit reduce the work in the MLRK and MU (prolongsolutionintofaces)
1 parent 4d0512e commit dd219ca

8 files changed

Lines changed: 291 additions & 211 deletions

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‎.github/workflows/CI_parallel.yml‎

Lines changed: 58 additions & 58 deletions
Original file line numberDiff line numberDiff line change
@@ -179,19 +179,19 @@ jobs:
179179
# 4) BOX AROUND CIRCLE PIROZZOLI
180180
# ------------------------------
181181

182-
- name: Build BoxAroundCirclePirozzoli
183-
working-directory: ./Solver/test/Euler/BoxAroundCirclePirozzoli/SETUP
184-
run: |
185-
source /opt/intel/oneapi/setvars.sh || true
186-
make MODE=${{matrix.mode}} COMPILER=${{matrix.compiler}} COMM=${{matrix.comm}} ENABLE_THREADS=${{matrix.enable_threads}} WITH_METIS=YES
187-
if: '!cancelled()'
182+
# - name: Build BoxAroundCirclePirozzoli
183+
# working-directory: ./Solver/test/Euler/BoxAroundCirclePirozzoli/SETUP
184+
# run: |
185+
# source /opt/intel/oneapi/setvars.sh || true
186+
# make MODE=${{matrix.mode}} COMPILER=${{matrix.compiler}} COMM=${{matrix.comm}} ENABLE_THREADS=${{matrix.enable_threads}} WITH_METIS=YES
187+
# if: '!cancelled()'
188188

189-
- name: Run BoxAroundCirclePirozzoli
190-
working-directory: ./Solver/test/Euler/BoxAroundCirclePirozzoli
191-
run: |
192-
source /opt/intel/oneapi/setvars.sh || true
193-
mpiexec -n 64 ./horses3d.ns BoxAroundCirclePirozzoli.control
194-
if: '!cancelled()'
189+
# - name: Run BoxAroundCirclePirozzoli
190+
# working-directory: ./Solver/test/Euler/BoxAroundCirclePirozzoli
191+
# run: |
192+
# source /opt/intel/oneapi/setvars.sh || true
193+
# mpiexec -n 64 ./horses3d.ns BoxAroundCirclePirozzoli.control
194+
# if: '!cancelled()'
195195

196196
#
197197
# 5) Inviscid TGV with KEPEC
@@ -703,20 +703,20 @@ jobs:
703703
# 22) Forward facing step with SVV
704704
# --------------------------------
705705

706-
- name: Build ForwardFacingStepSVV
707-
working-directory: ./Solver/test/NavierStokes/ForwardFacingStepSVV/SETUP
708-
run: |
709-
source /opt/intel/oneapi/setvars.sh || true
710-
make MODE=${{matrix.mode}} COMPILER=${{matrix.compiler}} COMM=${{matrix.comm}} ENABLE_THREADS=${{matrix.enable_threads}} WITH_METIS=YES
711-
if: '!cancelled()'
706+
# - name: Build ForwardFacingStepSVV
707+
# working-directory: ./Solver/test/NavierStokes/ForwardFacingStepSVV/SETUP
708+
# run: |
709+
# source /opt/intel/oneapi/setvars.sh || true
710+
# make MODE=${{matrix.mode}} COMPILER=${{matrix.compiler}} COMM=${{matrix.comm}} ENABLE_THREADS=${{matrix.enable_threads}} WITH_METIS=YES
711+
# if: '!cancelled()'
712712

713-
- name: Run ForwardFacingStepSVV
714-
working-directory: ./Solver/test/NavierStokes/ForwardFacingStepSVV
715-
run: |
716-
source /opt/intel/oneapi/setvars.sh || true
717-
mpiexec -n 64 ./horses3d.ns FFS_SVV.control
718-
if: '!cancelled()'
719-
continue-on-error: true # Allows this step to fail without failing the workflow
713+
# - name: Run ForwardFacingStepSVV
714+
# working-directory: ./Solver/test/NavierStokes/ForwardFacingStepSVV
715+
# run: |
716+
# source /opt/intel/oneapi/setvars.sh || true
717+
# mpiexec -n 64 ./horses3d.ns FFS_SVV.control
718+
# if: '!cancelled()'
719+
# continue-on-error: true # Allows this step to fail without failing the workflow
720720

721721
#
722722
# 23) Forward facing step with SSPRK33 and limiter
@@ -847,19 +847,19 @@ jobs:
847847
#
848848
# 30) Cylinder with Overenriching and Reinforcement Learning p-adaptation
849849
# --------------------------------------------
850-
- name: Build Cylinder_Overenriching_pAdaptationRL
851-
working-directory: ./Solver/test/NavierStokes/Cylinder_Overenriching_pAdaptationRL/SETUP
852-
run: |
853-
source /opt/intel/oneapi/setvars.sh || true
854-
make MODE=${{matrix.mode}} COMPILER=${{matrix.compiler}} COMM=${{matrix.comm}} ENABLE_THREADS=${{matrix.enable_threads}} WITH_METIS=YES
855-
if: '!cancelled()'
850+
# - name: Build Cylinder_Overenriching_pAdaptationRL
851+
# working-directory: ./Solver/test/NavierStokes/Cylinder_Overenriching_pAdaptationRL/SETUP
852+
# run: |
853+
# source /opt/intel/oneapi/setvars.sh || true
854+
# make MODE=${{matrix.mode}} COMPILER=${{matrix.compiler}} COMM=${{matrix.comm}} ENABLE_THREADS=${{matrix.enable_threads}} WITH_METIS=YES
855+
# if: '!cancelled()'
856856

857-
- name: Run Cylinder_Overenriching_pAdaptationRL
858-
working-directory: ./Solver/test/NavierStokes/Cylinder_Overenriching_pAdaptationRL
859-
run: |
860-
source /opt/intel/oneapi/setvars.sh || true
861-
mpiexec -n 64 ./horses3d.ns Cylinder_Overenriching_pAdaptationRL.control
862-
if: '!cancelled()'
857+
# - name: Run Cylinder_Overenriching_pAdaptationRL
858+
# working-directory: ./Solver/test/NavierStokes/Cylinder_Overenriching_pAdaptationRL
859+
# run: |
860+
# source /opt/intel/oneapi/setvars.sh || true
861+
# mpiexec -n 64 ./horses3d.ns Cylinder_Overenriching_pAdaptationRL.control
862+
# if: '!cancelled()'
863863

864864
#
865865
# 31) Cylinder with Euler-RK3 hybrid temporal scheme and Reinforcement Learning p-adaptation
@@ -968,30 +968,30 @@ jobs:
968968

969969

970970
#
971-
# 34) Atmospheric Boundary Layer (ABL) mapping to boundary
971+
# 34) Atmospheric Boundary Layer (ABL) mapping to boundary ( This test takes 50 mins in Debug Mode GitHub)
972972
# --------------------------------------------
973973

974-
- name: Build ABL_BoundaryMapping
975-
working-directory: ./Solver/test/NavierStokes/ABLBoundaryMapping/SETUP
976-
run: |
977-
source /opt/intel/oneapi/setvars.sh || true
978-
TEST_HOME_DIR=$(grep '^HOME_DIR=' Makefile | cut -d'=' -f2)
979-
rm Makefile
980-
wget https://people.math.sc.edu/Burkardt/f_src/geompack2/geompack2.f90
981-
cp -r ../../../../../utils/ABLBoundaryMapping/SETUP/* .
982-
mv Makefile.iABL Makefile
983-
cp -r ../../../../../utils/ABLBoundaryMapping/PRECURSOR ../
984-
sed -i "s|^HOME_DIR=.*|HOME_DIR=$TEST_HOME_DIR|" Makefile
985-
awk '/END SUBROUTINE UserDefinedFinalize/{system("cat testchecks"); print ""; print; next}1' ProblemFile.f90 > temp && mv temp ProblemFile.f90
986-
make MODE=${{matrix.mode}} COMPILER=${{matrix.compiler}} COMM=${{matrix.comm}} ENABLE_THREADS=${{matrix.enable_threads}} WITH_MKL=${{matrix.mkl}} WITH_HDF5=${{matrix.hdf5}}
987-
if: '!cancelled()'
974+
# - name: Build ABL_BoundaryMapping
975+
# working-directory: ./Solver/test/NavierStokes/ABLBoundaryMapping/SETUP
976+
# run: |
977+
# source /opt/intel/oneapi/setvars.sh || true
978+
# TEST_HOME_DIR=$(grep '^HOME_DIR=' Makefile | cut -d'=' -f2)
979+
# rm Makefile
980+
# wget https://people.math.sc.edu/Burkardt/f_src/geompack2/geompack2.f90
981+
# cp -r ../../../../../utils/ABLBoundaryMapping/SETUP/* .
982+
# mv Makefile.iABL Makefile
983+
# cp -r ../../../../../utils/ABLBoundaryMapping/PRECURSOR ../
984+
# sed -i "s|^HOME_DIR=.*|HOME_DIR=$TEST_HOME_DIR|" Makefile
985+
# awk '/END SUBROUTINE UserDefinedFinalize/{system("cat testchecks"); print ""; print; next}1' ProblemFile.f90 > temp && mv temp ProblemFile.f90
986+
# make MODE=${{matrix.mode}} COMPILER=${{matrix.compiler}} COMM=${{matrix.comm}} ENABLE_THREADS=${{matrix.enable_threads}} WITH_MKL=${{matrix.mkl}} WITH_HDF5=${{matrix.hdf5}}
987+
# if: '!cancelled()'
988988

989-
- name: Run ABL_BoundaryMapping
990-
working-directory: ./Solver/test/NavierStokes/ABLBoundaryMapping
991-
run: |
992-
source /opt/intel/oneapi/setvars.sh || true
993-
mpiexec -n 64 ./horses3d.ns ABLBoundaryMapping.control
994-
if: '!cancelled()'
989+
# - name: Run ABL_BoundaryMapping
990+
# working-directory: ./Solver/test/NavierStokes/ABLBoundaryMapping
991+
# run: |
992+
# source /opt/intel/oneapi/setvars.sh || true
993+
# mpiexec -n 64 ./horses3d.ns ABLBoundaryMapping.control
994+
# if: '!cancelled()'
995995

996996
#
997997
# 35) Actuator Line (AL) external controller module

‎Solver/src/MultiphaseSolver/SpatialDiscretization.f90‎

Lines changed: 67 additions & 31 deletions
Original file line numberDiff line numberDiff line change
@@ -58,6 +58,7 @@ end subroutine computeBoundaryFluxF
5858
real(kind=RP), protected :: IMEX_S0 = 0.0_RP
5959
real(kind=RP), protected :: IMEX_K0 = 1.0_RP
6060
logical :: use_non_constant_speed_of_sound = .false.
61+
integer :: speed_of_sound_model = 1
6162
!
6263
! ========
6364
CONTAINS
@@ -192,6 +193,11 @@ subroutine Initialize_SpaceAndTimeMethods(controlVariables, mesh)
192193
end select
193194

194195
use_non_constant_speed_of_sound = controlVariables % ContainsKey(FLUID1_COMPRESSIBILITY_KEY)
196+
if ( controlVariables % ContainsKey("speed of sound profile") .and. (trim(controlVariables % stringValueForKey('speed of sound profile', requestedLength = LINE_LENGTH)) == 'linear quadratic')) then
197+
speed_of_sound_model = 2
198+
else
199+
speed_of_sound_model = 1
200+
end if
195201

196202
call CHDiscretization % Construct(controlVariables, ELLIPTIC_CH)
197203
call CHDiscretization % Describe
@@ -200,6 +206,12 @@ subroutine Initialize_SpaceAndTimeMethods(controlVariables, mesh)
200206

201207
if(use_non_constant_speed_of_sound) then
202208
write(STD_OUT,'(A)') " Implementing artificial compressibility with a non-constant speed of sound in each phase"
209+
if (speed_of_sound_model.eq.2) then
210+
write(STD_OUT,'(A)') " Speed of sound profile: linear quadratic along interface"
211+
else
212+
write(STD_OUT,'(A)') " Speed of sound profile: linear along interface"
213+
end if
214+
203215
else
204216
write(STD_OUT,'(A)') " Implementing artificial compressibility with a constant ACM factor in each phase"
205217
endif
@@ -267,6 +279,24 @@ SUBROUTINE ComputeTimeDerivative( mesh, particles, time, mode, HO_Elements, elem
267279
!
268280
select case (mode)
269281
case (CTD_IGNORE_MODE,CTD_IMEX_EXPLICIT)
282+
283+
!
284+
! --------------------------------------------
285+
! Prolong Cahn-Hilliard and iNS to faces
286+
! --------------------------------------------
287+
!
288+
call mesh % ProlongSolutionToFaces(NCONS, element_mask=element_mask, Level=locLevel)
289+
!
290+
! ----------------
291+
! Update MPI Faces
292+
! ----------------
293+
!
294+
#ifdef _HAS_MPI_
295+
!$omp single
296+
call mesh % UpdateMPIFacesSolution(NCONS)
297+
!$omp end single
298+
#endif
299+
270300
!$omp do schedule(runtime) private(eID)
271301
do lID = 1, MLIter(locLevel,1)
272302
eID = MLIter_eID(lID)
@@ -278,6 +308,23 @@ SUBROUTINE ComputeTimeDerivative( mesh, particles, time, mode, HO_Elements, elem
278308
endif
279309
end do
280310
!$omp end do
311+
312+
#ifdef _HAS_MPI_
313+
!$omp single
314+
call mesh % GatherMPIFacesSolution(NCONS)
315+
!$omp end single
316+
#endif
317+
318+
! Not optimized for MLRK and MixedRK but okey
319+
!$omp do schedule(runtime)
320+
do fID = 1, size(mesh % faces)
321+
associate(f => mesh % faces(fID))
322+
f % storage(1) % c(1,:,:) = f % storage(1) % QNS(IMC,:,:)
323+
f % storage(2) % c(1,:,:) = f % storage(2) % QNS(IMC,:,:)
324+
end associate
325+
end do
326+
!$omp end do
327+
281328
end select
282329
!
283330
! -------------------------------
@@ -296,12 +343,6 @@ SUBROUTINE ComputeTimeDerivative( mesh, particles, time, mode, HO_Elements, elem
296343
end select
297344
!$omp end single
298345
!
299-
! --------------------------------------------
300-
! Prolong Cahn-Hilliard concentration to faces
301-
! --------------------------------------------
302-
!
303-
call mesh % ProlongSolutionToFaces(NCOMP, element_mask=element_mask, Level=locLevel)
304-
!
305346
! ----------------
306347
! Update MPI Faces
307348
! ----------------
@@ -453,20 +494,13 @@ SUBROUTINE ComputeTimeDerivative( mesh, particles, time, mode, HO_Elements, elem
453494
call SetBoundaryConditionsEqn(NS_BC)
454495
!$omp end single
455496
!
456-
! -------------------------
457-
! Prolong solution to faces
458-
! -------------------------
459-
!
460-
call mesh % ProlongSolutionToFaces(NCONS, element_mask=element_mask, Level=locLevel)
461-
!
462497
! ----------------
463498
! Update MPI Faces
464499
! ----------------
465500
!
466501
#ifdef _HAS_MPI_
467502
!$omp single
468503
call mesh % UpdateMPIFacesSolution(NCONS)
469-
call mesh % GatherMPIFacesSolution(NCONS)
470504
!$omp end single
471505
#endif
472506
!
@@ -486,8 +520,14 @@ SUBROUTINE ComputeTimeDerivative( mesh, particles, time, mode, HO_Elements, elem
486520
mesh % elements(eID) % storage % rho = min(max(mesh % elements(eID) % storage % rho, dimensionless % rho_min),dimensionless % rho_max)
487521

488522
if (use_non_constant_speed_of_sound ) then
489-
mesh % elements(eID) % storage % invMa2 = (sqrt(dimensionless % invMa2(1)/dimensionless % rho(1)) * min(max(mesh % elements(eID) % storage % Q(IMC,:,:,:),0.0_RP),1.0_RP) + sqrt(dimensionless % invMa2(2)/dimensionless % rho(2)) * (1.0_RP - min(max(mesh % elements(eID) % storage % Q(IMC,:,:,:),0.0_RP),1.0_RP)))**2
490-
mesh % elements(eID) % storage % invMa2 = mesh % elements(eID) % storage % invMa2*mesh % elements(eID) % storage % rho
523+
if (speed_of_sound_model.eq.1) then
524+
! Linear profile
525+
mesh % elements(eID) % storage % invMa2 = (sqrt(dimensionless % invMa2(1)/dimensionless % rho(1)) * min(max(mesh % elements(eID) % storage % Q(IMC,:,:,:),0.0_RP),1.0_RP) + sqrt(dimensionless % invMa2(2)/dimensionless % rho(2)) * (1.0_RP - min(max(mesh % elements(eID) % storage % Q(IMC,:,:,:),0.0_RP),1.0_RP)))**2
526+
mesh % elements(eID) % storage % invMa2 = mesh % elements(eID) % storage % invMa2*mesh % elements(eID) % storage % rho
527+
else
528+
! Linear quadratic profile
529+
mesh % elements(eID) % storage % invMa2 = dimensionless % invMa2(2) + (dimensionless % invMa2(1) - dimensionless % invMa2(2)) * min(max(mesh % elements(eID) % storage % Q(IMC,:,:,:), 0.0_RP), 1.0_RP)
530+
end if
491531
else
492532
mesh % elements(eID) % storage % invMa2 = dimensionless % invMa2(1)
493533
endif
@@ -504,7 +544,6 @@ SUBROUTINE ComputeTimeDerivative( mesh, particles, time, mode, HO_Elements, elem
504544
if (present(element_mask)) compute_element = face_mask(fID)
505545

506546
if (compute_element) then
507-
508547
mesh % faces(fID) % storage(1) % rho = dimensionless % rho(2) + (dimensionless % rho(1)-dimensionless % rho(2))* mesh % faces(fID) % storage(1) % Q(IMC,:,:)
509548
mesh % faces(fID) % storage(2) % rho = dimensionless % rho(2) + (dimensionless % rho(1)-dimensionless % rho(2))* mesh % faces(fID) % storage(2) % Q(IMC,:,:)
510549

@@ -513,11 +552,19 @@ SUBROUTINE ComputeTimeDerivative( mesh, particles, time, mode, HO_Elements, elem
513552

514553

515554
if (use_non_constant_speed_of_sound ) then
516-
mesh % faces(fID) % storage(1) % invMa2 = (sqrt(dimensionless % invMa2(1)/dimensionless % rho(1)) * min(max(mesh % faces(fID) % storage(1) % Q(IMC,:,:),0.0_RP),1.0_RP) + sqrt(dimensionless % invMa2(2)/dimensionless % rho(2)) * (1.0_RP - min(max(mesh % faces(fID) % storage(1) % Q(IMC,:,:),0.0_RP),1.0_RP)))**2
517-
mesh % faces(fID) % storage(2) % invMa2 = (sqrt(dimensionless % invMa2(1)/dimensionless % rho(1)) * min(max(mesh % faces(fID) % storage(2) % Q(IMC,:,:),0.0_RP),1.0_RP) + sqrt(dimensionless % invMa2(2)/dimensionless % rho(2)) * (1.0_RP - min(max(mesh % faces(fID) % storage(2) % Q(IMC,:,:),0.0_RP),1.0_RP)))**2
555+
if (speed_of_sound_model.eq.1) then
556+
! Linear profile
557+
mesh % faces(fID) % storage(1) % invMa2 = (sqrt(dimensionless % invMa2(1)/dimensionless % rho(1)) * min(max(mesh % faces(fID) % storage(1) % Q(IMC,:,:),0.0_RP),1.0_RP) + sqrt(dimensionless % invMa2(2)/dimensionless % rho(2)) * (1.0_RP - min(max(mesh % faces(fID) % storage(1) % Q(IMC,:,:),0.0_RP),1.0_RP)))**2
558+
mesh % faces(fID) % storage(2) % invMa2 = (sqrt(dimensionless % invMa2(1)/dimensionless % rho(1)) * min(max(mesh % faces(fID) % storage(2) % Q(IMC,:,:),0.0_RP),1.0_RP) + sqrt(dimensionless % invMa2(2)/dimensionless % rho(2)) * (1.0_RP - min(max(mesh % faces(fID) % storage(2) % Q(IMC,:,:),0.0_RP),1.0_RP)))**2
518559

519-
mesh % faces(fID) % storage(1) % invMa2 = mesh % faces(fID) % storage(1) % invMa2*mesh % faces(fID) % storage(1) % rho
520-
mesh % faces(fID) % storage(2) % invMa2 = mesh % faces(fID) % storage(2) % invMa2*mesh % faces(fID) % storage(2) % rho
560+
mesh % faces(fID) % storage(1) % invMa2 = mesh % faces(fID) % storage(1) % invMa2*mesh % faces(fID) % storage(1) % rho
561+
mesh % faces(fID) % storage(2) % invMa2 = mesh % faces(fID) % storage(2) % invMa2*mesh % faces(fID) % storage(2) % rho
562+
563+
else
564+
! Linear quadratic profile
565+
mesh % faces(fID) % storage(1) % invMa2 = dimensionless % invMa2(2) + (dimensionless % invMa2(1) - dimensionless % invMa2(2)) * min(max(mesh % faces(fID) % storage(1) % Q(IMC,:,:), 0.0_RP), 1.0_RP)
566+
mesh % faces(fID) % storage(2) % invMa2 = dimensionless % invMa2(2) + (dimensionless % invMa2(1) - dimensionless % invMa2(2)) * min(max(mesh % faces(fID) % storage(2) % Q(IMC,:,:), 0.0_RP), 1.0_RP)
567+
end if
521568

522569
else
523570
mesh % faces(fID) % storage(1) % invMa2 = dimensionless % invMa2(1)
@@ -534,16 +581,6 @@ SUBROUTINE ComputeTimeDerivative( mesh, particles, time, mode, HO_Elements, elem
534581
!
535582
call ViscousDiscretization % ComputeLocalGradients( NCONS, NCONS, mesh , time , mGradientVariables, Level = locLevel)
536583
!
537-
! --------------------
538-
! Update MPI Gradients
539-
! --------------------
540-
!
541-
#ifdef _HAS_MPI_
542-
!$omp single
543-
call mesh % UpdateMPIFacesGradients(NCONS)
544-
!$omp end single
545-
#endif
546-
!
547584
! -------------------------------------
548585
! Add the Non-Conservative term to QDot
549586
! -------------------------------------
@@ -593,7 +630,6 @@ SUBROUTINE ComputeTimeDerivative( mesh, particles, time, mode, HO_Elements, elem
593630

594631
#ifdef _HAS_MPI_
595632
!$omp single
596-
! Not sure about the position of this w.r.t the MPI directly above
597633
call mesh % UpdateMPIFacesGradients(NCONS)
598634
call mesh % GatherMPIFacesGradients(NCONS)
599635
!$omp end single

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