cyCONDOR/DESCRIPTION at master · lorenzobonaguro/cyCONDOR · GitHub

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Package: cyCONDOR
Type: Package
Title: Flow Cytometry data analysis toolbox
Version: 0.3.1
Authors@R: c(
  person(given = "Lorenzo", family = "Bonaguro", email = "lorenzo.bonaguro@dzne.de", role = c("aut", "cre")),
  person(given = "Charlotte", family = "Kroeger", email = "charlotte.kroeger@dzne.de", role = "aut"),
  person(given = "Sophie", family = "Mueller", email = "sophie.mueller@dzne.de", role = "aut"),
  person(given = "Jacqueline", family = "Leidner", email = "jacqueline.leidner@dzne.de", role = "aut"),
  person(given = "Aleksej", family = "Frolov", email = "aleksej.frolov@dzne.de", role = "aut"),
  person(given = "Francesco", family = "Elli", email = "francesco.elli@dzne.de", role = "aut"),
  person(given = "Nico", family = "Henschel", email = "nico.henschel@dzne.de", role = "aut")
  )
Description: Flow cytometry analysis workflow. The aim of this project is to
    provide an intuitive workflow for the analysis of high-dimensionality cytometry data in R.
URL: https://lorenzobonaguro.github.io/cyCONDOR, https://github.com/lorenzobonaguro/cyCONDOR
template:
License: GPL-3 + file LICENSE
Encoding: UTF-8
biocViews:
Imports:
    ggplot2,
    RColorBrewer,
    Matrix,
    pheatmap,
    reshape2,
    flowCore,
    Rtsne,
    Rphenograph,
    devtools,
    umap,
    ggpubr,
    readr,
    readxl,
    stringr,
    harmony,
    ggsci,
    destiny,
    SingleCellExperiment,
    slingshot,
    Rmisc,
    ggrastr,
    igraph,
    uwot,
    FlowSOM,
    Rphenoannoy,
    ggrepel,
    caret,
    randomForest,
    flowWorkspace,
    Biobase,
    CytoML,
    CytoDx,
    Hmisc,
    DelayedMatrixStats,
    cowplot,
    dplyr,
    reticulate,
    SummarizedExperiment,
    diffcyt,
    ggridges,
    rstatix,
    tidyr,
    CytoNorm,
    corrplot,
    S4Vectors
Remotes:
    JinmiaoChenLab/Rphenograph,
    stuchly/Rphenoannoy,
    saeyslab/CytoNorm@362ac08
RoxygenNote: 7.3.2
VignetteBuilder: knitr
Suggests:
    rmarkdown,
    knitr,
    testthat (>= 3.0.0),
    here
Config/testthat/edition: 3