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10 | 10 |
|
11 | 11 | Open-source, MATLAB-based software for automated data processing and quantification of edited <sup>1</sup>H magnetic resonance spectroscopy (MRS) data. |
12 | 12 |
|
13 | | -Full software documentation can be found [here](https://markmikkelsen.github.io/Gannet-docs/index.html). Visit our [blog](https://gabamrs.com/) for the latest news on Gannet and our developments in edited MRS methodology. |
| 13 | +Full software documentation can be found [here](https://markmikkelsen.github.io/Gannet-docs/index.html). |
14 | 14 |
|
15 | 15 | ## Overview |
16 | 16 |
|
17 | | -Gannet is a free, open-source MATLAB-based software toolkit for analyzing edited 1H magnetic resonance spectroscopy (MRS) data. Its largely automated functions cover all the essential steps of modern MRS analysis: |
| 17 | +Gannet is a free, open-source MATLAB-based software toolkit for analyzing edited <sup>1</sup>H magnetic resonance spectroscopy (MRS) data. Its largely automated functions cover all the essential steps of modern MRS analysis: |
18 | 18 |
|
19 | 19 | - Loading raw data |
20 | 20 | - Substantial preprocessing |
@@ -43,17 +43,17 @@ To run the voxel co-registration and structural image segmentation modules, [SPM |
43 | 43 |
|
44 | 44 | ### Download |
45 | 45 |
|
46 | | -The simplest way to install Gannet is to download the code from the [GitHub repository](https://github.com/markmikkelsen/Gannet) and move the `Gannet-main/` directory into your MATLAB directory. |
| 46 | +The simplest way to install Gannet is to download the code from the <a href="https://github.com/markmikkelsen/Gannet" target="_blank">GitHub repository</a> and move the `Gannet-main/` directory into your MATLAB directory. |
47 | 47 |
|
48 | 48 | Alternatively, git-savvy users can clone the Gannet repository into a directory of their choice: |
49 | 49 |
|
50 | 50 | `git clone https://github.com/markmikkelsen/Gannet.git` |
51 | 51 |
|
52 | | -The development version can downloaded from the [development branch](https://github.com/markmikkelsen/Gannet/tree/dev) on GitHub or by using the following git command if the repository was cloned: |
| 52 | +The development version can be downloaded from the <a href="https://github.com/markmikkelsen/Gannet/tree/dev" target="_blank">development branch</a> on GitHub or by using the following git command if the repository was cloned: |
53 | 53 |
|
54 | 54 | `git checkout dev` |
55 | 55 |
|
56 | | -Stable releases can be found [here](https://github.com/markmikkelsen/Gannet/releases). |
| 56 | +Stable releases can be found <a href="https://github.com/markmikkelsen/Gannet/releases" target="_blank">here</a>. |
57 | 57 |
|
58 | 58 | ### Setup |
59 | 59 |
|
@@ -91,8 +91,7 @@ If you encounter any problems, please first check the [documentation website](ht |
91 | 91 |
|
92 | 92 | Otherwise, you can post your query on the [Gannet forum](https://forum.mrshub.org/c/mrs-software/gannet/9) on the [MRSHub](https://mrshub.org/). |
93 | 93 |
|
94 | | -The support team can also be directly reached using our blog's [contact form](https://gabamrs.com/contact). We will do our best to work with you to solve your issue. |
95 | | - |
| 94 | +The Gannet team can also be directly < a href= "mailto:[email protected]?subject=[Gannet]%20<subject>" target= "_blank">contacted</ a>. We will do our best to work with you to solve your issue. |
96 | 95 | ## Versioning |
97 | 96 |
|
98 | 97 | [Semantic versioning](https://semver.org/) is used when updates are made to Gannet using the style 'x.x.x'. Versioning is also conducted on a module-specific basis using the style 'YYMMDD'. That is, each Gannet module has its own release version. |
@@ -161,6 +160,8 @@ We wish to thank the following individuals for their direct or indirect contribu |
161 | 160 | - Alex Craven (University of Bergen) |
162 | 161 | - Philipp Ehses (Max Planck Institute for Biological Cybernetics) |
163 | 162 | - Robin de Graaf (Yale School of Medicine) |
| 163 | +- Xiangrui Li (Ohio State University) |
164 | 164 | - Jamie Near (McGill University) |
165 | 165 | - Ralph Noeske (GE Healthcare) |
166 | 166 | - Wouter Potters (UMC Amsterdam) |
| 167 | +- Jan Simon (Heidelberg) |
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