Merge branch 'bids-standard:master' into master

Author: markmikkelsen

.all-contributorsrc

@@ -424,6 +424,9 @@
             "profile": "https://github.com/musicinmybrain"
         },
         {
+            "avatar_url": [
+                "https://avatars.githubusercontent.com/u/844306?v=4"
+            ],
             "contributions": [
                 "doc",
                 "code",
@@ -434,9 +437,6 @@
             "profile": "https://bendichter.com/"
         },
         {
-            "avatar_url": [
-                "https://avatars.githubusercontent.com/u/844306?v=4"
-            ],
             "contributions": [
                 "doc"
             ],

.github/dependabot.yml

@@ -19,3 +19,15 @@ updates:
       interval: "monthly"
     labels:
       - "exclude-from-changelog"
+    groups:
+      build-dependencies:
+        patterns: ["*"]
+  - package-ecosystem: "npm"
+    directory: "/"
+    schedule:
+      interval: "monthly"
+    labels:
+      - "exclude-from-changelog"
+    groups:
+      node-utilities:
+        patterns: ["*"]

.github/workflows/changelog_generator.yml

@@ -32,7 +32,7 @@ jobs:
         with:
           fetch-depth: 0
           filter: "blob:none"
-      - uses: actions/setup-python@v5
+      - uses: actions/setup-python@v6
         with:
           python-version: 3
       - run: env

.github/workflows/publish_schema.yml

@@ -134,7 +134,7 @@ jobs:
       - uses: actions/checkout@v5
 
       - name: Set Up Python environment
-        uses: actions/setup-python@v5
+        uses: actions/setup-python@v6
         with:
           python-version: "3.11"
 

.github/workflows/schemacode_ci.yml

@@ -24,13 +24,13 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - uses: actions/checkout@v5
-      - uses: actions/setup-node@v4
+      - uses: actions/setup-node@v5
         with:
           node-version: 22
       - name: Install dependencies
-        run: npm install `cat npm-requirements.txt`
+        run: npm install
       - name: Run style checks
-        run: npx remark src/**/*.md --frail --rc-path .remarkrc
+        run: npm run remark
 
   # YAML
   yamllint:

.github/workflows/validation.yml

@@ -14,8 +14,6 @@ pdf_build_src/src_copy
 pdf_build_src/tests/data/output
 
 # JS/NPM
-package-lock.json
-package.json
 node_modules/
 
 # Python gitignore

.gitignore

@@ -17,7 +17,7 @@ repos:
       - id: check-added-large-files
       - id: check-case-conflict
   - repo: https://github.com/python-jsonschema/check-jsonschema
-    rev: 0.33.3
+    rev: 0.34.0
     hooks:
       - id: check-dependabot
       - id: check-github-workflows
@@ -49,7 +49,7 @@ repos:
       - id: codespell
         args: ["--config=.codespellrc", "--dictionary=-", "--dictionary=.codespell_dict"]
   - repo: https://github.com/pre-commit/mirrors-mypy
-    rev: v1.17.1
+    rev: v1.18.2
     hooks:
       - id: mypy
         # Sync with project.optional-dependencies.typing

.pre-commit-config.yaml

@@ -293,48 +293,41 @@ NodeJS.
 Remark-CLI can be installed via [npm](https://www.npmjs.com/), which is part of
 the NodeJS distribution.
 
-To install the packages we use for our style guide, the following command will
-work on most command lines:
+To install the packages we use for our style guide, use the following command:
 
 ```shell
-npm install `cat npm-requirements.txt`
-```
-
-The equivalent command on PowerShell is:
-
-```shell
-npm install @(cat npm-requirements.txt)
+npm install
 ```
 
 ### 3. Find documents that are failing the check
 
 Run the following from the root directory of `bids-specification`:
 
 ```shell
-npx remark ./src/*.md ./src/*/*.md
+npm run remark
 ```
 
 ### 4. Fix the flagged document
 
 Please go to the directory where the flagged file is and run remark like this:
 
 ```shell
-npx remark flagged_file.md -o flagged_file_fixed.md
+npx remark path/to/flagged_file.md -o path/to/flagged_file_fixed.md
 ```
 
-Please confirm this has fixed the file. To do this, please run this:
+To confirm this has fixed the file, run:
 
 ```shell
-npx remark flagged_file_fixed.md --frail
+npx remark path/to/flagged_file_fixed.md --frail
 ```
 
 This command will indicate whether this file now conforms to the style guide.
 If it passes, replace `flagged_file.md` with the contents of
 `flagged_file_fixed.md`, add and commit the change:
 
 ```shell
-mv flagged_file_fixed.md flagged_file.md
-git add flagged_file.md
+mv path/to/flagged_file_fixed.md path/to/flagged_file.md
+git add path/to/flagged_file.md
 git commit -m 'STY: Fixed Markdown style'
 ```
 

CONTRIBUTING.md

@@ -15,7 +15,6 @@ See also: [BIDS governance](https://bids.neuroimaging.io/collaboration/governanc
 
 | Name                                                                         | Time commitment | Scope                                 | Joined   |
 | ---------------------------------------------------------------------------- | --------------- | ------------------------------------- | -------- |
-| Stefan Appelhoff ([@sappelhoff](https://github.com/sappelhoff))              | 1h/week         |                                       | Mar 2020 |
 | Chris Markiewicz ([@effigies](https://github.com/effigies))                  | 5h/week         |                                       | Mar 2020 |
 | Ross Blair ([@rwblair](https://github.com/rwblair))                          |                 | Maintainer of the bids-validator      | Mar 2020 |
 | Taylor Salo ([@tsalo](https://github.com/tsalo))                             | 3h/week         | MRI                                   | Sep 2020 |
@@ -48,6 +47,7 @@ See also: [BIDS governance](https://bids.neuroimaging.io/collaboration/governanc
 | Name                                                                           | Duration            |
 | ------------------------------------------------------------------------------ | ------------------- |
 | Franklin Feingold ([@franklin-feingold](https://github.com/franklin-feingold)) | Mar 2020 - Jul 2022 |
+| Stefan Appelhoff ([@sappelhoff](https://github.com/sappelhoff))                | Mar 2020 - Aug 2025 |
 
 ## Why become a maintainer?