Change infos re needed disk space for environments

Stefan Hahmann · Stefan Hahmann · commit 82629bee7e50 · 2025-05-22T14:21:39.000+02:00
diff --git a/src/main/java/org/mastodon/mamut/detection/Cellpose3Detector.java b/src/main/java/org/mastodon/mamut/detection/Cellpose3Detector.java
@@ -70,7 +70,7 @@
 		+ "After the segmentation, spots are derived by fitting of ellipsoids to the pixel clouds of the detected objects.<br>"
 		+ "Different Cellpose models can be used for different types of images. A cell probability threshold can be set to allow more/less sensitive detection.<br>"
 		+ "For 3D data, anisotropy can be respected.<br><br>"
-		+ "<strong>When this detection method is used for the first time, internet connection is needed, since an internal installation process is started. The installation consumes ~7GB hard disk space.</strong><br>"
+		+ "<strong>When this detection method is used for the first time, internet connection is needed, since an internal installation process is started. The installation consumes ~7.5GB hard disk space.</strong><br>"
 		+ "</html>" )
 public class Cellpose3Detector extends AbstractSpotDetectorOp
 {
diff --git a/src/main/java/org/mastodon/mamut/detection/Cellpose4Detector.java b/src/main/java/org/mastodon/mamut/detection/Cellpose4Detector.java
@@ -67,7 +67,7 @@
 		+ "<i>Stringer et al.</i>, 2021, Nature Methods.<br><br>"
 		+ "After the segmentation, spots are derived by fitting of ellipsoids to the pixel clouds of the detected objects.<br>"
 		+ "A cell probability threshold can be set to allow more/less sensitive detection.<br><br>"
-		+ "<strong>When this detection method is used for the first time, internet connection is needed, since an internal installation process is started. The installation consumes ~7GB hard disk space.</strong><br>"
+		+ "<strong>When this detection method is used for the first time, internet connection is needed, since an internal installation process is started. The installation consumes ~9GB hard disk space.</strong><br>"
 		+ "</html>" )
 public class Cellpose4Detector extends AbstractSpotDetectorOp
 {
diff --git a/src/main/java/org/mastodon/mamut/detection/StarDistDetector.java b/src/main/java/org/mastodon/mamut/detection/StarDistDetector.java
@@ -38,7 +38,7 @@
 		+ "<i>Uwe Schmidt, Martin Weigert, Coleman Broaddus, and Gene Myers</i>, International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI), Granada, Spain, 2018.<br><br>"
 		+ "After the segmentation, spots are derived by fitting of ellipsoids to the pixel clouds of the detected objects.<br>"
 		+ "A cell probability threshold can be set to allow more/less sensitive detection.<br><br>"
-		+ "<strong>When this detection method is used for the first time, internet connection is needed, since an internal installation process is started. The installation consumes ~7GB hard disk space.</strong><br>"
+		+ "<strong>When this detection method is used for the first time, internet connection is needed, since an internal installation process is started. The installation consumes ~5.5GB hard disk space.</strong><br>"
 		+ "</html>" )
 public class StarDistDetector extends AbstractSpotDetectorOp
 {

Original file line number	Diff line number	Diff line change
`@@ -70,7 +70,7 @@`
`70`	`70`	`+ "After the segmentation, spots are derived by fitting of ellipsoids to the pixel clouds of the detected objects.<br>"`
`71`	`71`	`+ "Different Cellpose models can be used for different types of images. A cell probability threshold can be set to allow more/less sensitive detection.<br>"`
`72`	`72`	`+ "For 3D data, anisotropy can be respected.<br><br>"`
`73`		`- + "<strong>When this detection method is used for the first time, internet connection is needed, since an internal installation process is started. The installation consumes ~7GB hard disk space.</strong><br>"`
	`73`	`+ + "<strong>When this detection method is used for the first time, internet connection is needed, since an internal installation process is started. The installation consumes ~7.5GB hard disk space.</strong><br>"`
`74`	`74`	`+ "</html>" )`
`75`	`75`	`public class Cellpose3Detector extends AbstractSpotDetectorOp`
`76`	`76`	`{`
Original file line number	Diff line number	Diff line change
`@@ -67,7 +67,7 @@`
`67`	`67`	`+ "<i>Stringer et al.</i>, 2021, Nature Methods.<br><br>"`
`68`	`68`	`+ "After the segmentation, spots are derived by fitting of ellipsoids to the pixel clouds of the detected objects.<br>"`
`69`	`69`	`+ "A cell probability threshold can be set to allow more/less sensitive detection.<br><br>"`
`70`		`- + "<strong>When this detection method is used for the first time, internet connection is needed, since an internal installation process is started. The installation consumes ~7GB hard disk space.</strong><br>"`
	`70`	`+ + "<strong>When this detection method is used for the first time, internet connection is needed, since an internal installation process is started. The installation consumes ~9GB hard disk space.</strong><br>"`
`71`	`71`	`+ "</html>" )`
`72`	`72`	`public class Cellpose4Detector extends AbstractSpotDetectorOp`
`73`	`73`	`{`
Original file line number	Diff line number	Diff line change
`@@ -38,7 +38,7 @@`
`38`	`38`	`+ "<i>Uwe Schmidt, Martin Weigert, Coleman Broaddus, and Gene Myers</i>, International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI), Granada, Spain, 2018.<br><br>"`
`39`	`39`	`+ "After the segmentation, spots are derived by fitting of ellipsoids to the pixel clouds of the detected objects.<br>"`
`40`	`40`	`+ "A cell probability threshold can be set to allow more/less sensitive detection.<br><br>"`
`41`		`- + "<strong>When this detection method is used for the first time, internet connection is needed, since an internal installation process is started. The installation consumes ~7GB hard disk space.</strong><br>"`
	`41`	`+ + "<strong>When this detection method is used for the first time, internet connection is needed, since an internal installation process is started. The installation consumes ~5.5GB hard disk space.</strong><br>"`
`42`	`42`	`+ "</html>" )`
`43`	`43`	`public class StarDistDetector extends AbstractSpotDetectorOp`
`44`	`44`	`{`