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Convert run_ms2query to class #101

Convert run_ms2query to class

Convert run_ms2query to class #101

Triggered via push March 23, 2026 11:21
Status Failure
Total duration 7m 40s
Artifacts
first code check / python-3.13 / ubuntu-latest
7m 36s
first code check / python-3.13 / ubuntu-latest
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5 errors and 1 warning
first code check / python-3.13 / ubuntu-latest
Process completed with exit code 1.
Ruff (F401): tests/test_run_ms2query.py#L10
tests/test_run_ms2query.py:10:31: F401 `matchms.exporting.save_as_mgf` imported but unused
Ruff (F401): tests/test_run_ms2query.py#L8
tests/test_run_ms2query.py:8:66: F401 `ms2query.run_ms2query.run_ms2query_from_files` imported but unused
Ruff (I001): tests/test_run_ms2query.py#L1
tests/test_run_ms2query.py:1:1: I001 Import block is un-sorted or un-formatted
Ruff (E501): ms2query/run_ms2query.py#L50
ms2query/run_ms2query.py:50:121: E501 Line too long (122 > 120)
first code check / python-3.13 / ubuntu-latest
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/checkout@v4, actions/setup-python@v5. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/