fixing issues of merge

Author: matthiaskoenig

src/sbmlsim/comparison/simulate_roadrunner.py

@@ -39,7 +39,7 @@ def simulate_condition(
         self, condition: Condition, timepoints: List[float]
     ) -> pd.DataFrame:
         """Simulate condition"""
-        print(f"simulate condition: {condition.sid}")
+        # print(f"simulate condition: {condition.sid}")
 
         # reset
         self.r.resetAll()
@@ -51,7 +51,7 @@ def simulate_condition(
             if np.isnan(value):
                 continue
             # is species
-            print(tid)
+            # print(tid)
             if tid in self.species:
                 if self.has_only_substance[tid] is True:
                     # amount
@@ -60,7 +60,7 @@ def simulate_condition(
                     # concentration
                     target = f"init([{tid}])"
                 self.r.setValue(target, value)
-                print(f"{target} = {value}")
+                # print(f"{target} = {value}")
             else:
                 self.r.setValue(tid, value)
                 console.print(f"{tid} = {value}")

src/sbmlsim/data.py

@@ -7,11 +7,10 @@
 
 import pandas as pd
 from pymetadata import log
-from pymetadata.console import console
 
 from sbmlsim.combine import mathml
 from sbmlsim.units import DimensionalityError, Quantity, UnitRegistry, UnitsInformation
-from sbmlsim.xresult import XResult
+from sbmlsim.result import XResult
 
 
 logger = log.get_logger(__name__)
@@ -238,7 +237,6 @@ def get_data(
             print(experiment.results.keys())
             xres: XResult = experiment.results[self.task_id]
             if not isinstance(xres, XResult):
-                console.print(xres)
                 raise ValueError("Only Result objects supported in task data.")
 
             # units match the symbols