Merge pull request #181 from matthiaskoenig/sbmlsim2

Sbmlsim2

Author: matthiaskoenig

README.md

@@ -1,3 +1,6 @@
+![sbmlsim logo](https://github.com/matthiaskoenig/sbmlsim/raw/develop/docs/images/favicon/sbmlsim-100x100-300dpi.png)
+
+
 # sbmlsim: SBML simulation made easy
 [![GitHub Actions CI/CD Status](https://github.com/matthiaskoenig/sbmlsim/workflows/CI-CD/badge.svg)](https://github.com/matthiaskoenig/sbmlsim/actions/workflows/main.yml)
 [![Version](https://img.shields.io/pypi/v/sbmlsim.svg)](https://pypi.org/project/sbmlsim/)
@@ -8,7 +11,7 @@
 
 sbmlsim is a collection of python utilities to simplify simulations with
 [SBML](http://www.sbml.org) models implemented on top of
-[roadrunner](http://libroadrunner.org/). Source code is available from 
+[roadrunner](http://libroadrunner.org/). Source code is available from
 [https://github.com/matthiaskoenig/sbmlsim](https://github.com/matthiaskoenig/sbmlsim).
 
 Features include among others
@@ -21,8 +24,8 @@ Features include among others
 If you have any questions or issues please [open an issue](https://github.com/matthiaskoenig/sbmlsim/issues).
 
 ## Installation
-sbmlutils is available from [pypi](https://pypi.python.org/pypi/sbmlsim) and 
-can be installed via 
+sbmlutils is available from [pypi](https://pypi.python.org/pypi/sbmlsim) and
+can be installed via
 ```bash
 pip install sbmlsim
 ```
@@ -42,12 +45,12 @@ pip install git+https://github.com/matthiaskoenig/sbmlsim.git@develop
 - Documentation: [CC BY-SA 4.0](http://creativecommons.org/licenses/by-sa/4.0/)
 
 ## Funding
-Matthias König is supported and by the German Research Foundation (DFG) within the Research Unit Programme FOR 5151 
-"QuaLiPerF (Quantifying Liver Perfusion-Function Relationship in Complex Resection - 
-A Systems Medicine Approach)" by grant number 436883643 and by grant number 
+Matthias König is supported and by the German Research Foundation (DFG) within the Research Unit Programme FOR 5151
+"QuaLiPerF (Quantifying Liver Perfusion-Function Relationship in Complex Resection -
+A Systems Medicine Approach)" by grant number 436883643 and by grant number
 465194077 (Priority Programme SPP 2311, Subproject SimLivA).
 
 Matthias König was supported by the Federal Ministry of Education and Research (BMBF, Germany)
-within the research network Systems Medicine of the Liver (**LiSyM**, grant number 031L0054).
- 
+within the research network Systems Medicine of the Liver (LiSyM, grant number 031L0054).
+
 © 2019-2026 Matthias König

release-notes/0.3.0.md

@@ -1,10 +1,13 @@
 # Release notes for sbmlsim 0.3.0
+![sbmlsim logo](https://github.com/matthiaskoenig/sbmlsim/raw/develop/docs/images/favicon/sbmlsim-100x100-300dpi.png)
 
 We are pleased to release the next version of pymetadata including the
 following changes:
 
 ## Features & fixes
 * python 3.13 and 3.14 support
 * sensitivity analysis
+* updated README (#173)
+* logo added to documentation (#175)
 
 Your pymetadata team