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README.md

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@@ -20,7 +20,7 @@ ADRSM (Ancient DNA Read Simulator for Metagenomics) is a tool designed to simula
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# Usage
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adrsm -d ./data/genomes ./data/short_genome_list.csv
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adrsm ./data/short_genome_list.csv
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# Output
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-se SEED Seed for random generator. Default = 7357
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-t THREADS Number of threads for parallel processing. Default = 2
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## Genome directory
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Each genome `fasta` file must be named after the name of the organism. (example: [data/genomes](./data/genomes))
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## Configuration file (`confFile`)
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The configuration file is a `.csv` file describing, one line per genome, the mean insert size, and the expected genome coverage.

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