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Ekin-Kahramanmeeseeksmachine
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Backport PR scverse#4057: docs: add inline example plot to sc.pl.rank_genes_groups_stacked_violin
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src/scanpy/plotting/_tools/__init__.py

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@@ -1053,13 +1053,15 @@ def rank_genes_groups_stacked_violin( # noqa: PLR0913
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Examples
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--------
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>>> import scanpy as sc
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>>> adata = sc.datasets.pbmc68k_reduced()
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>>> sc.tl.rank_genes_groups(adata, "bulk_labels")
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Plot top marker genes per group as a stacked violin.
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>>> sc.pl.rank_genes_groups_stacked_violin(
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... adata, n_genes=4, min_logfoldchange=4, figsize=(8, 6)
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... )
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.. plot::
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:context: close-figs
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import scanpy as sc
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adata = sc.datasets.pbmc68k_reduced()
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sc.tl.rank_genes_groups(adata, "bulk_labels")
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sc.pl.rank_genes_groups_stacked_violin(adata, n_genes=4, min_logfoldchange=4, figsize=(8, 6))
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"""
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return _rank_genes_groups_plot(

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