NAMESPACE

export(postgwas, snp2gene.prox, snp2gene.LD, gene2p, GATES, SpD, gwasGOenrich, regionalplot, manhattanplot, gwas2network, getInteractions.path, getInteractions.proteincomplex, getInteractions.domains, getInteractions.GO, removeNeighborSnps, getGenotypes, LDparallel, biomartConfigs, ytracks.regionalplot, gwas2network.plot, getSnpsByWin, getSnpsByRS, bm.id2name, bm.name2id, bm.remapSnps, getPostgwasBuffer, setPostgwasBuffer, clearPostgwasBuffer)
import(biomaRt)
import(data.table)
import(org.Hs.eg.db)
importFrom(GenABEL, r2fast, snp.data, load.gwaa.data)
# import(genetics)
# manhattanplot
import(grid)
importFrom(gtools, odd, even)
# regionalplot
import(lattice)
importFrom(gdata, trim)
importFrom(coin, wilcox_test)
# gwas2network
import(igraph)
import(Rgraphviz)
# GOSimRedist
importFrom(RBGL, sp.between)
importFrom(RBGL, johnson.all.pairs.sp)
importFrom(RBGL, separates)
useDynLib(postgwas,OAWrapper)