Merge pull request #2107 from milaboratory/julenmendieta/adaptToNewMitoolLogs

Julenmendieta/adapt to new mitool logs

Author: julenmendieta

build.gradle.kts

@@ -135,7 +135,7 @@ val obfuscationLibs: Configuration by configurations.creating
 
 
 
-val mixcrAlgoVersion = "4.7.0-65-develop"
+val mixcrAlgoVersion = "4.7.0-67-develop"
 // may be blank (will be inherited from mixcr-algo)
 val milibVersion = ""
 // may be blank (will be inherited from mixcr-algo or milib)

src/test/kotlin/com/milaboratory/mixcr/cli/AlignerReportBuilderTest.kt

@@ -56,7 +56,6 @@ class AlignerReportBuilderTest {
         val rep = reportBuilder()
             .setTagReport(
                 ParseReport(
-                    0L,
                     0L,
                     0L,
                     0.0,

src/test/kotlin/com/milaboratory/mixcr/util/SerializationTest.kt

@@ -14,7 +14,6 @@ class SerializationTest {
     fun `mitool tag correction report`() {
         val report = MiToolReportsDelegate.RefineTags(
             TagCorrectionCmdReport(
-                0,
                 "mitool refineTags",
                 listOf("input"),
                 listOf("output"),
@@ -36,7 +35,7 @@ class SerializationTest {
     fun `mitool parse correction report`() {
         val report = MiToolReportsDelegate.Parse(
             ParseCmdReport(
-                ParseReport(null, 5L, 1L, 0.5, emptyMap(), emptyList()),
+                ParseReport(5L, 1L, 0.5, emptyMap(), emptyList()),
                 null,
                 "mitool refineTags",
                 listOf("input"),