|
23 | 23 | "plt.style.use(\"default\")\n", |
24 | 24 | "REJ_THR = {\n", |
25 | 25 | " 0.01: {\"ks\": 6, \"cvm\": 9, \"mw\": 9, \"es\": 8},\n", |
26 | | - " 0.05: {\"ks\": 11, \"cvm\": 16, \"mw\": 16, \"es\": 15},\n", |
| 26 | + " 0.05: {\"ks\": 11, \"cvm\": 16, \"mw\": 16, \"wsr\": 15},\n", |
27 | 27 | "}" |
28 | 28 | ] |
29 | 29 | }, |
|
78 | 78 | "\n", |
79 | 79 | " for ixp, _param in enumerate(params):\n", |
80 | 80 | " _ntests = pbr.ntests(case_data[_param], idx)[stest]\n", |
81 | | - " # for ixm, _method in enumerate(case_data[_param][0].methods):\n", |
82 | | - " for ixm, _method in enumerate([\"uncor\", \"fdr_bh\"]):\n", |
| 81 | + " for ixm, _method in enumerate(case_data[_param][0].methods):\n", |
| 82 | + " # for ixm, _method in enumerate([\"uncor\", \"fdr_bh\"]):\n", |
83 | 83 | " _method_hum = f\"{case_data[_param][0].methods[_method]} - {case_data[_param][0].stests[stest]}\"\n", |
84 | 84 | " axis[ixp].semilogy(\n", |
85 | 85 | " _ntests[\"pct_change\"],\n", |
|
262 | 262 | " )" |
263 | 263 | ] |
264 | 264 | }, |
| 265 | + { |
| 266 | + "cell_type": "code", |
| 267 | + "execution_count": null, |
| 268 | + "id": "daa0cd55", |
| 269 | + "metadata": {}, |
| 270 | + "outputs": [], |
| 271 | + "source": [] |
| 272 | + }, |
265 | 273 | { |
266 | 274 | "cell_type": "code", |
267 | 275 | "execution_count": null, |
|
295 | 303 | "metadata": {}, |
296 | 304 | "outputs": [], |
297 | 305 | "source": [ |
298 | | - "lstyle = {\"uncor\": \"-\", \"fdr_bh\": \"--\"}\n", |
| 306 | + "lstyle = {\"uncor\": \"-\", \"fdr_bh\": \"--\", \"fdr_by\": \"-.\", \"bonferroni\": \":\"}\n", |
299 | 307 | "ornl_colours = {\n", |
300 | 308 | " \"green\": \"#007833\",\n", |
301 | 309 | " \"bgreen\": \"#84b641\",\n", |
|
308 | 316 | "colors = {\n", |
309 | 317 | " \"ks\": ornl_colours[\"green\"],\n", |
310 | 318 | " \"cvm\": ornl_colours[\"blue\"],\n", |
311 | | - " \"es\": ornl_colours[\"red\"],\n", |
| 319 | + " \"wsr\": ornl_colours[\"red\"],\n", |
312 | 320 | " \"mw\": ornl_colours[\"orange\"]\n", |
313 | 321 | "}\n", |
314 | 322 | "markers = {\n", |
315 | 323 | " \"ks\": \"o\",\n", |
316 | 324 | " \"cvm\": \".\",\n", |
317 | | - " \"es\": \"H\",\n", |
| 325 | + " \"wsr\": \"H\",\n", |
318 | 326 | " \"mw\": \"x\"\n", |
319 | 327 | "}\n", |
320 | 328 | "fig, axes = plt.subplots(1, 3, figsize=(15, 4), sharey=True)\n", |
321 | 329 | "\n", |
322 | 330 | "for idx, param in enumerate(nfailed):\n", |
323 | 331 | " for stest in nfailed[param]:\n", |
324 | | - " for method in [\"uncor\", \"fdr_bh\"]:\n", |
| 332 | + " # for method in [\"uncor\", \"fdr_bh\"]:\n", |
| 333 | + " for method in nfailed[param][stest]:\n", |
325 | 334 | " axes[idx].semilogy(\n", |
326 | 335 | " pct_change[param],\n", |
327 | 336 | " nfailed[param][stest][method],\n", |
|
392 | 401 | "\n", |
393 | 402 | "for idx, param in enumerate(nfailed):\n", |
394 | 403 | " for stest in nfailed[param]:\n", |
| 404 | + " if stest == \"wsr\":\n", |
| 405 | + " continue\n", |
395 | 406 | " # for method in nfailed[param][stest]:\n", |
396 | 407 | " for method in [\"fdr_bh\",]:\n", |
397 | 408 | " if method != \"uncor\":\n", |
|
400 | 411 | " (\n", |
401 | 412 | " np.array(nfailed[param][stest][method]) -\n", |
402 | 413 | " np.array(nfailed[param][stest][\"uncor\"])\n", |
403 | | - " ) / niter,\n", |
| 414 | + " ), # / np.array(nfailed[param][stest][\"uncor\"]),\n", |
404 | 415 | " color=colors[stest],\n", |
405 | 416 | " label=f\"{stest} - {method}\",\n", |
406 | 417 | " ls=lstyle[method],\n", |
|
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