[pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

Author: pre-commit-ci[bot]

doc/authors.rst

@@ -61,4 +61,4 @@
 .. _William Turner: https://bootstrapbill.github.io/
 .. _Yorguin Mantilla: https://github.com/yjmantilla
 .. _Julius Welzel: https://github.com/JuliusWelzel
-.. _Kalle Mäkelä: https://github.com/Kallemakela
+.. _Kalle Mäkelä: https://github.com/Kallemakela

mne_bids/read.py

@@ -853,7 +853,9 @@ def _handle_channels_reading(channels_fname, raw, ch_name_mismatch="raise"):
                 raise RuntimeError(
                     f"Channel mismatch between {channels_fname} and the raw data file detected."
                 )
-            warn(f"Channel mismatch between {channels_fname} and the raw data file detected. Using mismatch strategy: {ch_name_mismatch}.")
+            warn(
+                f"Channel mismatch between {channels_fname} and the raw data file detected. Using mismatch strategy: {ch_name_mismatch}."
+            )
             if ch_name_mismatch == "reorder":
                 raw.reorder_channels(ch_names_tsv)
             elif ch_name_mismatch == "rename":
@@ -901,7 +903,12 @@ def _handle_channels_reading(channels_fname, raw, ch_name_mismatch="raise"):
 
 @verbose
 def read_raw_bids(
-    bids_path, extra_params=None, *, return_event_dict=False, ch_name_mismatch="raise", verbose=None
+    bids_path,
+    extra_params=None,
+    *,
+    return_event_dict=False,
+    ch_name_mismatch="raise",
+    verbose=None,
 ):
     """Read BIDS compatible data.
 
@@ -1104,7 +1111,9 @@ def read_raw_bids(
         bids_path, suffix="channels", extension=".tsv", on_error="warn"
     )
     if channels_fname is not None:
-        raw = _handle_channels_reading(channels_fname, raw, ch_name_mismatch=ch_name_mismatch)
+        raw = _handle_channels_reading(
+            channels_fname, raw, ch_name_mismatch=ch_name_mismatch
+        )
 
     # Try to find an associated electrodes.tsv and coordsystem.json
     # to get information about the status and type of present channels

mne_bids/tests/test_read.py

@@ -33,9 +33,9 @@
 )
 from mne_bids.path import _find_matching_sidecar
 from mne_bids.read import (
+    _handle_channels_reading,
     _handle_events_reading,
     _handle_scans_reading,
-    _handle_channels_reading,
     _read_raw,
     events_file_to_annotation_kwargs,
     get_head_mri_trans,
@@ -1548,7 +1548,14 @@ def _setup_nirs_channel_mismatch(tmp_path):
     channels_fname = tmp_path / "channels.tsv"
     _to_tsv(channels_dict, channels_fname)
 
-    return raw, ch_order_snirf, ch_order_bids, channels_fname, orig_name_to_loc, orig_name_to_data
+    return (
+        raw,
+        ch_order_snirf,
+        ch_order_bids,
+        channels_fname,
+        orig_name_to_loc,
+        orig_name_to_data,
+    )
 
 
 def test_channel_mismatch_raise(tmp_path):
@@ -1561,14 +1568,18 @@ def test_channel_mismatch_raise(tmp_path):
 
 
 def test_channel_mismatch_reorder(tmp_path):
-    raw, _, ch_order_bids, channels_fname, orig_name_to_loc, orig_name_to_data = _setup_nirs_channel_mismatch(tmp_path)
+    raw, _, ch_order_bids, channels_fname, orig_name_to_loc, orig_name_to_data = (
+        _setup_nirs_channel_mismatch(tmp_path)
+    )
     with (
         pytest.warns(
             RuntimeWarning,
             match=r"Channel mismatch between .*channels\.tsv and the raw data file detected\. Using mismatch strategy: reorder\.",
         ),
     ):
-        raw_out = _handle_channels_reading(channels_fname, raw, ch_name_mismatch="reorder")
+        raw_out = _handle_channels_reading(
+            channels_fname, raw, ch_name_mismatch="reorder"
+        )
     assert raw_out.ch_names == ch_order_bids
     for i, new_name in enumerate(raw_out.ch_names):
         np.testing.assert_allclose(
@@ -1580,14 +1591,23 @@ def test_channel_mismatch_reorder(tmp_path):
 
 
 def test_channel_mismatch_rename(tmp_path):
-    raw, ch_order_snirf, ch_order_bids, channels_fname, orig_name_to_loc, orig_name_to_data = _setup_nirs_channel_mismatch(tmp_path)
+    (
+        raw,
+        ch_order_snirf,
+        ch_order_bids,
+        channels_fname,
+        orig_name_to_loc,
+        orig_name_to_data,
+    ) = _setup_nirs_channel_mismatch(tmp_path)
     with (
         pytest.warns(
             RuntimeWarning,
             match=r"Channel mismatch between .*channels\.tsv and the raw data file detected\. Using mismatch strategy: rename\.",
         ),
     ):
-        raw_out_rename = _handle_channels_reading(channels_fname, raw.copy(), ch_name_mismatch="rename")
+        raw_out_rename = _handle_channels_reading(
+            channels_fname, raw.copy(), ch_name_mismatch="rename"
+        )
     assert raw_out_rename.ch_names == ch_order_bids
     for i in range(len(ch_order_bids)):
         orig_name_at_i = ch_order_snirf[i]