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tischitischi
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Fix PNG test
1 parent 68bbc3b commit 74fd513

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Lines changed: 284 additions & 5 deletions

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‎pom.xml‎

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -9,7 +9,7 @@
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<groupId>org.embl.mobie</groupId>
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<artifactId>mobie-io</artifactId>
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<version>4.0.4-SNAPSHOT</version>
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<version>4.0.4</version>
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<!-- ../scijava-scripts/release-version.sh - -skip-version-check - -skip-license-update -->
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<!-- mvn clean install -Dmaven.test.skip=true -->
@@ -83,7 +83,7 @@
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<scm>
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<connection>scm:git:https://github.com/mobie/mobie-io</connection>
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<developerConnection>scm:git:git@github.com:mobie/mobie-io</developerConnection>
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<tag>HEAD</tag>
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<tag>mobie-io-4.0.4</tag>
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<url>https://github.com/mobie/mobie-io</url>
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</scm>
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<issueManagement>

‎pom.xml.releaseBackup‎

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<?xml version="1.0" encoding="UTF-8"?>
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<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 https://maven.apache.org/xsd/maven-4.0.0.xsd">
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<modelVersion>4.0.0</modelVersion>
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<parent>
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<groupId>org.scijava</groupId>
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<artifactId>pom-scijava</artifactId>
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<version>40.0.0</version>
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</parent>
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<groupId>org.embl.mobie</groupId>
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<artifactId>mobie-io</artifactId>
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<version>4.0.4-SNAPSHOT</version>
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<!-- ../scijava-scripts/release-version.sh - -skip-version-check - -skip-license-update -->
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<!-- mvn clean install -Dmaven.test.skip=true -->
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<url>https://github.com/mobie/mobie-io</url>
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<name>MoBIE IO</name>
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<description>Readers and writers for image data in MoBIE projects</description>
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<inceptionYear>2021</inceptionYear>
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<organization>
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<name>EMBL</name>
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<url>http://embl.de/</url>
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</organization>
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<licenses>
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<license>
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<name>Simplified BSD License</name>
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<distribution>repo</distribution>
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</license>
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</licenses>
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<developers>
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<developer>
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<id>tischi</id>
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<name>Christian Tischer</name>
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<roles>
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<role>lead</role>
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<role>developer</role>
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<role>debugger</role>
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<role>reviewer</role>
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<role>support</role>
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<role>maintainer</role>
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</roles>
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</developer>
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<developer>
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<id>KateMoreva</id>
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<name>Ekaterina Moreva</name>
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<roles>
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<role>lead</role>
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<role>developer</role>
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<role>debugger</role>
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<role>reviewer</role>
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<role>support</role>
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<role>maintainer</role>
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</roles>
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</developer>
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</developers>
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<contributors>
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<contributor>
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<name>Kimberly Meechan</name>
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<roles>
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<role>developer</role>
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<role>debugger</role>
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<role>reviewer</role>
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<role>support</role>
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</roles>
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</contributor>
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<contributor>
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<name>Tobias Pietzsch</name>
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<roles>
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<role>developer</role>
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<role>debugger</role>
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<role>reviewer</role>
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<role>support</role>
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</roles>
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</contributor>
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</contributors>
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<mailingLists>
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<mailingList>
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<name>ImageJ Forum</name>
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<archive>https://forum.image.sc/</archive>
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</mailingList>
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</mailingLists>
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<scm>
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<connection>scm:git:https://github.com/mobie/mobie-io</connection>
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<developerConnection>scm:git:git@github.com:mobie/mobie-io</developerConnection>
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<tag>HEAD</tag>
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<url>https://github.com/mobie/mobie-io</url>
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</scm>
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<issueManagement>
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<system>GitHub</system>
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<url>https://github.com/mobie/mobie-io/issues</url>
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</issueManagement>
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<ciManagement>
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<system>GitHub Actions</system>
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<url>https://github.com/mobie/mobie-io/actions</url>
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</ciManagement>
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<properties>
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<doclint>none</doclint>
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<package-name>org.embl.mobie.io</package-name>
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<license.licenseName>bsd_2</license.licenseName>
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<license.copyrightOwners>EMBL</license.copyrightOwners>
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<enforcer.skip>false</enforcer.skip>
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<someModule.test.excludes>src/test/java/projects/local</someModule.test.excludes>
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<scijava.surefire.args>-Xmx4024m</scijava.surefire.args>
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<!-- NB: Deploy releases to the SciJava Maven repository. -->
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<releaseProfiles>sign,deploy-to-scijava</releaseProfiles>
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<org.jetbrains.annotations.version>16.0.2</org.jetbrains.annotations.version>
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<bigdataviewer-image-loaders.version>0.10.0</bigdataviewer-image-loaders.version>
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<trove.version>1.0.2</trove.version>
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<everit-json-schema.version>1.14.0</everit-json-schema.version>
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<toml4j.version>0.7.2</toml4j.version>
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<!-- <n5-aws-s3.version>4.2.0</n5-aws-s3.version>-->
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<!-- <n5-blosc.version>1.1.1</n5-blosc.version>-->
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<!-- <n5-google-cloud.version>4.1.0</n5-google-cloud.version>-->
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<!-- <n5-hdf5.version>2.2.0</n5-hdf5.version>-->
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<!-- <n5-ij.version>4.2.1</n5-ij.version>-->
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<!-- <n5-imglib2.version>7.0.0</n5-imglib2.version>-->
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<!-- <n5-universe.version>1.6.0</n5-universe.version>-->
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<!-- <n5-viewer_fiji.version>6.1.1</n5-viewer_fiji.version>-->
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<!-- <n5-zarr.version>1.3.4</n5-zarr.version>-->
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<!-- <n5-zstandard.version>1.0.2</n5-zstandard.version>-->
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<!-- <n5.version>3.2.0</n5.version>-->
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<!-- <bigdataviewer-core.version>10.4.13</bigdataviewer-core.version>-->
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<!-- <bigdataviewer-vistools.version>1.0.0-beta-34</bigdataviewer-vistools.version>-->
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</properties>
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<build>
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<plugins>
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<plugin>
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<artifactId>maven-surefire-plugin</artifactId>
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<configuration>
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<excludes>
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<exclude>${someModule.test.excludes}</exclude>
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</excludes>
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</configuration>
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</plugin>
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</plugins>
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</build>
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<repositories>
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<repository>
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<id>scijava.public</id>
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<url>https://maven.scijava.org/content/groups/public</url>
149+
</repository>
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</repositories>
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<dependencies>
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<dependency>
153+
<groupId>org.janelia.saalfeldlab</groupId>
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<artifactId>n5-viewer_fiji</artifactId>
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</dependency>
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<dependency>
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<groupId>org.janelia.saalfeldlab</groupId>
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<artifactId>n5-universe</artifactId>
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</dependency>
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<dependency>
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<groupId>org.janelia.saalfeldlab</groupId>
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<artifactId>n5-ij</artifactId>
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</dependency>
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<dependency>
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<groupId>org.janelia.saalfeldlab</groupId>
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<artifactId>n5</artifactId>
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</dependency>
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<dependency>
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<groupId>org.janelia.saalfeldlab</groupId>
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<artifactId>n5-google-cloud</artifactId>
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</dependency>
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<dependency>
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<groupId>org.janelia.saalfeldlab</groupId>
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<artifactId>n5-aws-s3</artifactId>
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</dependency>
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<dependency>
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<groupId>net.imglib2</groupId>
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<artifactId>imglib2</artifactId>
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</dependency>
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<dependency>
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<groupId>net.imglib2</groupId>
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<artifactId>imglib2-cache</artifactId>
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</dependency>
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<dependency>
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<groupId>sc.fiji</groupId>
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<artifactId>bigdataviewer-core</artifactId>
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</dependency>
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<dependency>
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<groupId>sc.fiji</groupId>
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<artifactId>bigdataviewer-vistools</artifactId>
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</dependency>
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<dependency>
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<groupId>sc.fiji</groupId>
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<artifactId>bigdataviewer_fiji</artifactId>
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</dependency>
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<dependency>
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<groupId>sc.fiji</groupId>
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<artifactId>spim_data</artifactId>
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</dependency>
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<dependency>
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<groupId>ome</groupId>
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<artifactId>bio-formats_plugins</artifactId>
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</dependency>
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<dependency>
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<groupId>com.google.http-client</groupId>
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<artifactId>google-http-client</artifactId>
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</dependency>
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<dependency>
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<groupId>org.jetbrains</groupId>
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<artifactId>annotations</artifactId>
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<version>${org.jetbrains.annotations.version}</version>
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</dependency>
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<dependency>
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<groupId>net.imagej</groupId>
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<artifactId>ij</artifactId>
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</dependency>
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<dependency>
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<groupId>ch.epfl.biop</groupId>
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<artifactId>bigdataviewer-image-loaders</artifactId>
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<version>${bigdataviewer-image-loaders.version}</version>
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</dependency>
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<dependency>
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<groupId>trove</groupId>
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<artifactId>trove</artifactId>
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<version>${trove.version}</version>
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</dependency>
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<dependency>
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<groupId>com.moandjiezana.toml</groupId>
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<artifactId>toml4j</artifactId>
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<version>${toml4j.version}</version>
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</dependency>
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<dependency>
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<groupId>org.junit.jupiter</groupId>
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<artifactId>junit-jupiter-api</artifactId>
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<scope>test</scope>
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</dependency>
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<dependency>
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<groupId>org.junit.jupiter</groupId>
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<artifactId>junit-jupiter-engine</artifactId>
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<scope>test</scope>
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</dependency>
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<dependency>
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<groupId>com.github.erosb</groupId>
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<artifactId>everit-json-schema</artifactId>
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<version>${everit-json-schema.version}</version>
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<scope>test</scope>
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</dependency>
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</dependencies>
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</project>

‎release.properties‎

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#release configuration
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#Fri Jun 06 10:00:44 CEST 2025
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scm.commentPrefix=[maven-release-plugin]
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exec.pomFileName=pom.xml
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pushChanges=false
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releaseStrategyId=default
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project.scm.org.embl.mobie\:mobie-io.developerConnection=scm\:git\:git@github.com\:mobie/mobie-io
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project.scm.org.embl.mobie\:mobie-io.url=https\://github.com/mobie/mobie-io
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projectVersionPolicyConfig=<projectVersionPolicyConfig>${projectVersionPolicyConfig}</projectVersionPolicyConfig>\n
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scm.tag=mobie-io-4.0.4
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project.scm.org.embl.mobie\:mobie-io.connection=scm\:git\:https\://github.com/mobie/mobie-io
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remoteTagging=true
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project.dev.org.embl.mobie\:mobie-io=4.0.5-SNAPSHOT
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exec.additionalArguments=-Dgpg.skip\=true
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scm.branchCommitComment=@{prefix} prepare branch @{releaseLabel}
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projectVersionPolicyId=default
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scm.url=scm\:git\:git@github.com\:mobie/mobie-io
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scm.tagNameFormat=@{project.artifactId}-@{project.version}
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pinExternals=false
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preparationGoals=clean verify
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scm.releaseCommitComment=@{prefix} prepare release @{releaseLabel}
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exec.snapshotReleasePluginAllowed=false
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exec.activateProfiles=deploy-to-scijava
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scm.developmentCommitComment=@{prefix} prepare for next development iteration
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scm.rollbackCommitComment=@{prefix} rollback the release of @{releaseLabel}
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project.rel.org.embl.mobie\:mobie-io=4.0.4
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completedPhase=generate-release-poms
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project.scm.org.embl.mobie\:mobie-io.tag=HEAD

‎src/test/java/org/embl/mobie/io/imagedata/ImageDataTest.java‎

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@@ -22,15 +22,16 @@ class ImageDataTest < R extends RealType< R > >
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@Test
2323
public void openPNG()
2424
{
25-
System.out.println("openPNG");
25+
System.out.println("openPNG...");
2626
String uri = new File( "src/test/resources/images/boats.png" ).toString();
2727
ImageDataFormat imageDataFormat = ImageDataFormat.fromPath( uri );
2828
ImageData< ? > imageData = ImageDataOpener.open( uri, imageDataFormat, new SharedQueue( 1 ) );
2929
ValuePair< R, R > valuePair = computeMinMax( imageData );
30-
assertEquals( 3, valuePair.getA() );
31-
assertEquals( 220, valuePair.getB() );
30+
assertEquals( 3, valuePair.getA().getRealDouble() );
31+
assertEquals( 220, valuePair.getB().getRealDouble() );
3232
VoxelDimensions voxelDimensions = imageData.getSourcePair( 0 ).getB().getVoxelDimensions();
3333
assertNotNull( voxelDimensions );
34+
System.out.println("...openPNG: Done!");
3435
}
3536

3637
@Test
@@ -46,6 +47,7 @@ public void openMRC()
4647
assertEquals( -1468, valuePair.getA().getRealDouble() );
4748
assertEquals( 9827, valuePair.getB().getRealDouble() );
4849
assertNotNull( voxelDimensions );
50+
System.out.println("...openMRC: Done!");
4951
}
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public static void main( String[] args )

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