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Packageify & Migrate to Py3 #17
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Hi Tony (@molbio-dresden) and @KathSe1984! I think this is ready for review if you have time to check it out. |
crimBubble
reviewed
Apr 14, 2025
@crimBubble requested fix made. Let me know if there is anything else you want to change before merging. |
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Migrate module to modern scientific python package format
Hi All, thanks for producing this tool! I've found it super useful in my work. I've done a bit of refactoring here to improve usability in modern python envs.
This PR restructures Flexidot as a pip installable, Py3 compatible, package.
When merged this will support distribution via PyPi and Bioconda.
Versioning is now controlled via git tags.
Several cmd line args have been modified to simplify handling with argparse. Next release should bump up a major version to v2.0.0 to signal that it is not backwards compatible.
Compatibility issues
find_match_pos_diag()
Closes numpy version #15Refactor and Modernise package structure
Improve user experience
Automation
Testing