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Description
mpi4py in a Github runner seems to have stopped being able to allocate multiple threads. We have tests that need exactly 4 threads to pass and mpi4py from setup-mpi
seems to have stopped allocating anything other then 1, even tho it will still execute a given script n
times. For an example I am attaching a runner script, a sample mpi4py test, the incorrect, and the expected outputs.
For some more background see our issue tracking this problem
Thanks in advance!
mpi_error.yml
name: MPI CI Error
on: [push, pull_request]
jobs:
build:
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: ["ubuntu-latest"]
steps:
- uses: actions/checkout@v3
- name: Set up python 3.11
uses: actions/setup-python@v3
with:
python-version: "3.11"
- name: debug
run: |
pwd
ls
- uses: mpi4py/setup-mpi@v1
- name: Install dependencies
run: |
pip install mpi4py
- name: Run MPI
run : |
lscpu
mpiexec -n 4 python -m mpi4py.bench helloworld
mpiexec -n 4 python test_mpi.py
test_mpi.py
from mpi4py import MPI
print(MPI.COMM_WORLD.Get_size())
output when github runner CI is used
Hello, World! I am process 0 of 1 on fv-az1308-741.
Hello, World! I am process 0 of 1 on fv-az1308-741.
Hello, World! I am process 0 of 1 on fv-az1308-741.
Hello, World! I am process 0 of 1 on fv-az1308-741.
1
1
1
1
The expected output (commands run on a local machine configured with mpi4py)
Hello, World! I am process 0 of 4 on
Hello, World! I am process 1 of 4 on
Hello, World! I am process 2 of 4 on
Hello, World! I am process 3 of 4 on
4
4
4
4
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