Labels

• aggregation

  related to aggregation of different samples/pairs
• alignment

  related to generation of the bam file
• backburner

  probably won't address in a near future
• bug

  Something isn't working
• documentation
• duplicate

  This issue or pull request already exists
• enhancement

  New feature or request
• germline analysis

  related to post-alignment analysis of the germline sample
• help wanted

  Extra attention is needed
• high priority

  need a solution asap
• invalid

  This doesn't seem right
• nextflow

  issue potentially related to Nextflow
• PoN

  panel of normals
• potential limitation

  Could be fundamental issue that is difficult to debug/resolve and has execution ramifications
• qc

  related to qc modules
• question

  Further information is requested
• somatic analysis

  related to post-alignment analysis of the tumor sample
• target/bait

  related to target/bait resources
• task

  Task list for project management purpose
• wontfix

  This will not be worked on