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Merge pull request #446 from ncihtan/445-fix-stripe-calling-validation-rule
Remove stripe calling validation rule as @aditigopalan is away
2 parents 1ccbf6b + d539cb4 commit 58c0a1c

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HTAN.model.csv

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@@ -177,7 +177,7 @@ Ligation Condition,Name of ligase and condition for proximity ligation,,,,TRUE,S
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Biotin Enrichment,Whether biotin is used for enriching ligation product,"Yes, No",,,TRUE,Sequencing,,,
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DNA Input Amount,"Amount of DNA for library construction, in nanograms.",,,,TRUE,Sequencing,,,int
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Resolution,"Binning size used for generating contact matrix, in basepair.",,,,TRUE,Sequencing,,,
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Stripe Calling,"Tool used for identifying architectural stripe-forming, interaction hotspots.","MACS2, Other",,,TRUE,Sequencing,,,list::-?\d+
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Stripe Calling,"Tool used for identifying architectural stripe-forming, interaction hotspots.","MACS2, Other",,,TRUE,Sequencing,,,
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Loop Window,Binning size used for calling significant dot interactions (loops),,,,TRUE,Sequencing,,,list like :: regex search -?\d+
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Stripe Window,Binning size used for calling significant architectural stripes. Can be an integer or comma-separated list of integers indicating bin size and sliding window size if different.,,,,TRUE,Sequencing,,,list like :: regex search -?\d+
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Loop Calling,Tool used for identifying loop interactions,"HiCCUPS, Cooltools, Other",,,TRUE,Sequencing,,,

HTAN.model.jsonld

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],
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"sms:displayName": "Stripe Calling",
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"sms:required": "sms:true",
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"sms:validationRules": [
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"list",
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"-?\\d+"
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]
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"sms:validationRules": []
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},
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{
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"@id": "bts:LoopWindow",

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