Update Postgres Indexs (#31)

* Update Postgres Indexs

* update indexes

Author: cbaker6

README.md

@@ -139,6 +139,9 @@ Default values for environment variables: `PARSE_SERVER_APPLICATION_ID` and `PAR
 #### Running in production for ParseCareKit
 If you are plan on using parse-hipaa in production. You should run the additional scripts to create the rest of the indexes for optimized queries.
 
+##### Idempotency
+You most likely want to enable Idempotency. Read more about how to configure on [Parse Server](https://github.com/parse-community/parse-server#idempotency-enforcement). If you are using Postgres, look [here](https://github.com/netreconlab/parse-hipaa/tree/main/postgres/scripts/parse_idempotency_delete_expired_records) for the script.
+
 ##### Postgres
 If you are using `hipaa_postgres` or `parse-postgres` (the two images included in this repo). The `setup-parse-index.sh` is already in the container. You just have to run it. 
 

postgres/Dockerfile

@@ -4,12 +4,12 @@ MAINTAINER Network Reconnaissance Lab <[email protected]>
 RUN apt-get update && apt-get install -y --no-install-recommends\
   postgresql-$PG_MAJOR-pgaudit
 
-#Install additional scripts. These are run in abc order during initial start
+# Install additional scripts. These are run in abc order during initial start
 COPY ./scripts/setup-0-pgaudit.sh /docker-entrypoint-initdb.d/setup-0-pgaudit.sh
 COPY ./scripts/setup-dbs.sh /docker-entrypoint-initdb.d/setup-dbs.sh
 RUN chmod +x /docker-entrypoint-initdb.d/setup-0-pgaudit.sh /docker-entrypoint-initdb.d/setup-dbs.sh
 
-#Install script for ParseCareKit to be run after first run
+# Install script for ParseCareKit to be run after first run
 RUN mkdir parseScripts
 COPY ./scripts/setup-parse-index.sh ./parseScripts/setup-parse-index.sh
 RUN chmod +x ./parseScripts/setup-parse-index.sh

postgres/scripts/parse_idempotency_delete_expired_records.sh

@@ -0,0 +1,8 @@
+#!/bin/bash
+
+set -e
+psql -v ON_ERROR_STOP=1 --username "$POSTGRES_USER" --dbname "$POSTGRES_DB" <<-EOSQL
+    SELECT idempotency_delete_expired_records();
+EOSQL
+
+exec "$@"

postgres/scripts/setup-parse-index.sh

@@ -4,15 +4,24 @@ set -e
 
 psql -v ON_ERROR_STOP=1 --username "${POSTGRES_USER}" --dbname "${POSTGRES_DB}" <<-EOSQL
     \c ${PG_PARSE_DB};
-    CREATE INDEX IF NOT EXISTS Patient_deletedDate_is_null ON "Patient" (("deletedDate" IS NULL)) WHERE ("deletedDate" IS NULL);
-    CREATE INDEX IF NOT EXISTS Patient_next_is_null ON "Patient" ((next IS NULL)) WHERE (next IS NULL);
-    CREATE INDEX IF NOT EXISTS CarePlan_deletedDate_is_null ON "CarePlan" (("deletedDate" IS NULL)) WHERE ("deletedDate" IS NULL);
-    CREATE INDEX IF NOT EXISTS CarePlan_next_is_null ON "CarePlan" ((next IS NULL)) WHERE (next IS NULL);
-    CREATE INDEX IF NOT EXISTS Contact_deletedDate_is_null ON "Contact" (("deletedDate" IS NULL)) WHERE ("deletedDate" IS NULL);
-    CREATE INDEX IF NOT EXISTS Contact_next_is_null ON "Contact" ((next IS NULL)) WHERE (next IS NULL);
-    CREATE INDEX IF NOT EXISTS Task_deletedDate_is_null ON "Task" (("deletedDate" IS NULL)) WHERE ("deletedDate" IS NULL);
-    CREATE INDEX IF NOT EXISTS Task_next_is_null ON "Task" ((next IS NULL)) WHERE (next IS NULL);
-    CREATE INDEX IF NOT EXISTS Outcome_deletedDate_is_null ON "Outcome" (("deletedDate" IS NULL)) WHERE ("deletedDate" IS NULL);
+    CREATE INDEX IF NOT EXISTS "Patient_deletedDate_is_null" ON "Patient" (("deletedDate" IS NULL)) WHERE ("deletedDate" IS NULL);
+    CREATE INDEX IF NOT EXISTS "Patient_previousVersionUUIDs_array" ON "Patient" USING GIN ("previousVersionUUIDs");
+    CREATE INDEX IF NOT EXISTS "Patient_nextVersionUUIDs_array" ON "Patient" USING GIN ("nextVersionUUIDs");
+    CREATE INDEX IF NOT EXISTS "CarePlan_deletedDate_is_null" ON "CarePlan" (("deletedDate" IS NULL)) WHERE ("deletedDate" IS NULL);
+    CREATE INDEX IF NOT EXISTS "CarePlan_previousVersionUUIDs_array" ON "CarePlan" USING GIN ("previousVersionUUIDs");
+    CREATE INDEX IF NOT EXISTS "CarePlan_nextVersionUUIDs_array" ON "CarePlan" USING GIN ("nextVersionUUIDs");
+    CREATE INDEX IF NOT EXISTS "Contact_deletedDate_is_null" ON "Contact" (("deletedDate" IS NULL)) WHERE ("deletedDate" IS NULL);
+    CREATE INDEX IF NOT EXISTS "Contact_previousVersionUUIDs_array" ON "Contact" USING GIN ("previousVersionUUIDs");
+    CREATE INDEX IF NOT EXISTS "Contact_nextVersionUUIDs_array" ON "Contact" USING GIN ("nextVersionUUIDs");
+    CREATE INDEX IF NOT EXISTS "Task_deletedDate_is_null" ON "Task" (("deletedDate" IS NULL)) WHERE ("deletedDate" IS NULL);
+    CREATE INDEX IF NOT EXISTS "Task_previousVersionUUIDs_array" ON "Task" USING GIN ("previousVersionUUIDs");
+    CREATE INDEX IF NOT EXISTS "Task_nextVersionUUIDs_array" ON "Task" USING GIN ("nextVersionUUIDs");
+    CREATE INDEX IF NOT EXISTS "HealthKitTask_deletedDate_is_null" ON "HealthKitTask" (("deletedDate" IS NULL)) WHERE ("deletedDate" IS NULL);
+    CREATE INDEX IF NOT EXISTS "HealthKitTask_previousVersionUUIDs_array" ON "HealthKitTask" USING GIN ("previousVersionUUIDs");
+    CREATE INDEX IF NOT EXISTS "HealthKitTask_nextVersionUUIDs_array" ON "HealthKitTask" USING GIN ("nextVersionUUIDs");
+    CREATE INDEX IF NOT EXISTS "Outcome_deletedDate_is_null" ON "Outcome" (("deletedDate" IS NULL)) WHERE ("deletedDate" IS NULL);
+    CREATE INDEX IF NOT EXISTS "Outcome_previousVersionUUIDs_array" ON "Outcome" USING GIN ("previousVersionUUIDs");
+    CREATE INDEX IF NOT EXISTS "Outcome_nextVersionUUIDs_array" ON "Outcome" USING GIN ("nextVersionUUIDs");
 EOSQL
 
 exec "$@"