ninja format-pr

Author: nrnhines

bin/CMakeLists.txt

@@ -100,7 +100,7 @@ if(NRN_ENABLE_CORENEURON)
 endif()
 
 install(FILES ${PROJECT_BINARY_DIR}/bin/nrnmech_makefile DESTINATION ${NRN_INSTALL_DATA_PREFIX}bin)
-install(PROGRAMS ${CMAKE_CURRENT_BINARY_DIR}/sortspike ${CMAKE_CURRENT_BINARY_DIR}/rdcellstate
-                 ${CMAKE_CURRENT_SOURCE_DIR}/mkthreadsafe ${PROJECT_BINARY_DIR}/bin/nrnpyenv.sh
-                 ${CMAKE_CURRENT_SOURCE_DIR}/set_nrnpyenv.sh
-        DESTINATION ${NRN_INSTALL_DATA_PREFIX}bin)
+install(
+  PROGRAMS ${CMAKE_CURRENT_BINARY_DIR}/sortspike ${CMAKE_CURRENT_BINARY_DIR}/rdcellstate
+           ${CMAKE_CURRENT_SOURCE_DIR}/mkthreadsafe ${PROJECT_BINARY_DIR}/bin/nrnpyenv.sh
+           ${CMAKE_CURRENT_SOURCE_DIR}/set_nrnpyenv.sh DESTINATION ${NRN_INSTALL_DATA_PREFIX}bin)

share/lib/python/neuron/debug/rdcellstate.py

@@ -370,7 +370,9 @@ def compare_numeric_maps(
     diffs: List[Diff] = []
     all_keys = set(a_map) | set(b_map)
     for key in sorted(all_keys):
-        if should_ignore_key(key, ignore_ion, ignore_matrix, ignore_names, unused_fields):
+        if should_ignore_key(
+            key, ignore_ion, ignore_matrix, ignore_names, unused_fields
+        ):
             continue
         in_a = key in a_map
         in_b = key in b_map

test/CMakeLists.txt

@@ -224,8 +224,7 @@ if(NRN_ENABLE_PYTHON)
   nrn_add_test(
     GROUP unit_tests
     NAME python_unit_tests_debug_rdcellstate
-    COMMAND ${NRN_DEFAULT_PYTHON_EXECUTABLE} ${pytest}
-            ${PROJECT_SOURCE_DIR}/test/unit_tests/debug
+    COMMAND ${NRN_DEFAULT_PYTHON_EXECUTABLE} ${pytest} ${PROJECT_SOURCE_DIR}/test/unit_tests/debug
     PRELOAD_SANITIZER
     SCRIPT_PATTERNS "test/unit_tests/debug/*.py" "test/unit_tests/debug/fixtures/*")
 

test/unit_tests/debug/test_rdcellstate.py

@@ -81,7 +81,9 @@ def test_missing_mech_key():
     )
     missing = [d for d in diffs if not math.isfinite(d.abs_diff)]
     assert any(d.key[0] == "mech" for d in missing)
-    assert rd.main([str(_FIX / "ref_ab.nrndat"), str(_FIX / "mech_missing.nrndat")]) == 1
+    assert (
+        rd.main([str(_FIX / "ref_ab.nrndat"), str(_FIX / "mech_missing.nrndat")]) == 1
+    )
 
 
 def test_ignore_matrix_hides_format_asymmetry():
@@ -97,7 +99,9 @@ def test_ignore_matrix_hides_format_asymmetry():
     matrix_missing = [
         d
         for d in full
-        if d.key[0] == "matrix" and d.key[2] in ("d", "rhs") and not math.isfinite(d.abs_diff)
+        if d.key[0] == "matrix"
+        and d.key[2] in ("d", "rhs")
+        and not math.isfinite(d.abs_diff)
     ]
     assert matrix_missing
     ignored = rd.compare_numeric_maps(