Skip to content

Commit 2443275

Browse files
3dd6e96afcb09f2f420268a596f268bedda7c543
1 parent 6af4493 commit 2443275

File tree

147 files changed

+23085
-15278
lines changed

Some content is hidden

Large Commits have some content hidden by default. Use the searchbox below for content that may be hidden.

147 files changed

+23085
-15278
lines changed

.github/workflows/python.yml

Lines changed: 5 additions & 11 deletions
Original file line numberDiff line numberDiff line change
@@ -13,25 +13,19 @@ jobs:
1313
runs-on: ubuntu-latest
1414
strategy:
1515
matrix:
16-
python-version: ["3.7", "3.8", "3.9", "3.10", "3.11"]
16+
python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"]
1717

1818
steps:
19-
- uses: actions/checkout@v3
19+
- uses: actions/checkout@v4
2020
- name: Set up Python ${{ matrix.python-version }}
2121
uses: actions/setup-python@v4
2222
with:
2323
python-version: ${{ matrix.python-version }}
2424
- name: Install dependencies
2525
run: |
2626
python -m pip install --upgrade pip
27-
pip install flake8 pytest
28-
if [ -f requirements.txt ]; then pip install -r requirements.txt; fi
29-
- name: Lint with flake8
30-
run: |
31-
# stop the build if there are Python syntax errors or undefined names
32-
flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
33-
# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
34-
flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
27+
pip install -r requirements.txt
28+
pip install -r test-requirements.txt
3529
- name: Test with pytest
3630
run: |
37-
pytest
31+
pytest --cov={{packageName}}

.gitlab-ci.yml

Lines changed: 10 additions & 4 deletions
Original file line numberDiff line numberDiff line change
@@ -14,12 +14,18 @@ stages:
1414
- pip install -r test-requirements.txt
1515
- pytest --cov=neurosynth_compose_sdk
1616

17-
pytest-3.7:
18-
extends: .pytest
19-
image: python:3.7-alpine
2017
pytest-3.8:
2118
extends: .pytest
2219
image: python:3.8-alpine
2320
pytest-3.9:
2421
extends: .pytest
25-
image: python:3.9-alpine
22+
image: python:3.9-alpine
23+
pytest-3.10:
24+
extends: .pytest
25+
image: python:3.10-alpine
26+
pytest-3.11:
27+
extends: .pytest
28+
image: python:3.11-alpine
29+
pytest-3.12:
30+
extends: .pytest
31+
image: python:3.12-alpine

.openapi-generator/FILES

Lines changed: 1 addition & 4 deletions
Original file line numberDiff line numberDiff line change
@@ -8,7 +8,6 @@ docs/AnnotationList.md
88
docs/AnnotationPostBody.md
99
docs/AnnotationReturn.md
1010
docs/AnnotationUpdate.md
11-
docs/AnnotationUpdateAllOf.md
1211
docs/AnnotationsApi.md
1312
docs/ComposeApi.md
1413
docs/Corrector.md
@@ -29,7 +28,6 @@ docs/NeurostoreAnalysis.md
2928
docs/NeurostoreStudy.md
3029
docs/NeurostoreStudyList.md
3130
docs/NeurostoreStudyReturn.md
32-
docs/NeurovaultApi.md
3331
docs/NeurovaultCollection.md
3432
docs/NeurovaultCollectionFiles.md
3533
docs/NeurovaultCollectionReturn.md
@@ -77,7 +75,6 @@ neurosynth_compose_sdk/api/compose_api.py
7775
neurosynth_compose_sdk/api/default_api.py
7876
neurosynth_compose_sdk/api/get_api.py
7977
neurosynth_compose_sdk/api/meta_analyses_api.py
80-
neurosynth_compose_sdk/api/neurovault_api.py
8178
neurosynth_compose_sdk/api/post_api.py
8279
neurosynth_compose_sdk/api/projects_api.py
8380
neurosynth_compose_sdk/api/put_api.py
@@ -94,7 +91,6 @@ neurosynth_compose_sdk/models/annotation_list.py
9491
neurosynth_compose_sdk/models/annotation_post_body.py
9592
neurosynth_compose_sdk/models/annotation_return.py
9693
neurosynth_compose_sdk/models/annotation_update.py
97-
neurosynth_compose_sdk/models/annotation_update_all_of.py
9894
neurosynth_compose_sdk/models/corrector.py
9995
neurosynth_compose_sdk/models/estimator.py
10096
neurosynth_compose_sdk/models/meta_analyses_get400_response.py
@@ -143,6 +139,7 @@ neurosynth_compose_sdk/models/studyset_return.py
143139
neurosynth_compose_sdk/models/user.py
144140
neurosynth_compose_sdk/models/user_list.py
145141
neurosynth_compose_sdk/models/user_return.py
142+
neurosynth_compose_sdk/py.typed
146143
neurosynth_compose_sdk/rest.py
147144
pyproject.toml
148145
requirements.txt

.openapi-generator/VERSION

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -1 +1 @@
1-
6.6.0
1+
7.11.0

.travis.yml

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -1,13 +1,13 @@
11
# ref: https://docs.travis-ci.com/user/languages/python
22
language: python
33
python:
4-
- "3.7"
54
- "3.8"
65
- "3.9"
76
- "3.10"
87
- "3.11"
8+
- "3.12"
99
# uncomment the following if needed
10-
#- "3.11-dev" # 3.11 development branch
10+
#- "3.12-dev" # 3.12 development branch
1111
#- "nightly" # nightly build
1212
# command to install dependencies
1313
install:

README.md

Lines changed: 3 additions & 32 deletions
Original file line numberDiff line numberDiff line change
@@ -5,12 +5,13 @@ This Python package is automatically generated by the [OpenAPI Generator](https:
55

66
- API version: 1.0
77
- Package version: 0.0.1
8-
- Build package: org.openapitools.codegen.languages.PythonNextgenClientCodegen
8+
- Generator version: 7.11.0
9+
- Build package: org.openapitools.codegen.languages.PythonClientCodegen
910
For more information, please visit [https://github.com/jdkent](https://github.com/jdkent)
1011

1112
## Requirements.
1213

13-
Python 3.7+
14+
Python 3.8+
1415

1516
## Installation & Usage
1617
### pip install
@@ -51,7 +52,6 @@ Please follow the [installation procedure](#installation--usage) and then run th
5152

5253
```python
5354

54-
import time
5555
import neurosynth_compose_sdk
5656
from neurosynth_compose_sdk.rest import ApiException
5757
from pprint import pprint
@@ -101,14 +101,6 @@ Class | Method | HTTP request | Description
101101
*ComposeApi* | [**meta_analysis_results_id_get**](docs/ComposeApi.md#meta_analysis_results_id_get) | **GET** /meta-analysis-results/{id} | Your GET endpoint
102102
*ComposeApi* | [**meta_analysis_results_id_put**](docs/ComposeApi.md#meta_analysis_results_id_put) | **PUT** /meta-analysis-results/{id} |
103103
*ComposeApi* | [**meta_analysis_results_post**](docs/ComposeApi.md#meta_analysis_results_post) | **POST** /meta-analysis-results |
104-
*ComposeApi* | [**neurovault_collections_get**](docs/ComposeApi.md#neurovault_collections_get) | **GET** /neurovault-collections | Get neurovault collections
105-
*ComposeApi* | [**neurovault_collections_id_get**](docs/ComposeApi.md#neurovault_collections_id_get) | **GET** /neurovault-collections/{id} | Your GET endpoint
106-
*ComposeApi* | [**neurovault_collections_id_put**](docs/ComposeApi.md#neurovault_collections_id_put) | **PUT** /neurovault-collections/{id} |
107-
*ComposeApi* | [**neurovault_collections_post**](docs/ComposeApi.md#neurovault_collections_post) | **POST** /neurovault-collections | Create neurovault collection
108-
*ComposeApi* | [**neurovault_files_get**](docs/ComposeApi.md#neurovault_files_get) | **GET** /neurovault-files | Your GET endpoint
109-
*ComposeApi* | [**neurovault_files_id_get**](docs/ComposeApi.md#neurovault_files_id_get) | **GET** /neurovault-files/{id} | Your GET endpoint
110-
*ComposeApi* | [**neurovault_files_id_put**](docs/ComposeApi.md#neurovault_files_id_put) | **PUT** /neurovault-files/{id} |
111-
*ComposeApi* | [**neurovault_files_post**](docs/ComposeApi.md#neurovault_files_post) | **POST** /neurovault-files |
112104
*ComposeApi* | [**projects_get**](docs/ComposeApi.md#projects_get) | **GET** /projects | Your GET endpoint
113105
*ComposeApi* | [**projects_id_delete**](docs/ComposeApi.md#projects_id_delete) | **DELETE** /projects/{id} |
114106
*ComposeApi* | [**projects_id_get**](docs/ComposeApi.md#projects_id_get) | **GET** /projects/{id} | Your GET endpoint
@@ -123,10 +115,6 @@ Class | Method | HTTP request | Description
123115
*ComposeApi* | [**studysets_id_put**](docs/ComposeApi.md#studysets_id_put) | **PUT** /studysets/{id} | Update a Studyset
124116
*ComposeApi* | [**studysets_post**](docs/ComposeApi.md#studysets_post) | **POST** /studysets | Create a new Studyset
125117
*DefaultApi* | [**meta_analyses_id_delete**](docs/DefaultApi.md#meta_analyses_id_delete) | **DELETE** /meta-analyses/{id} |
126-
*DefaultApi* | [**neurostore_studies_get**](docs/DefaultApi.md#neurostore_studies_get) | **GET** /neurostore-studies | Your GET endpoint
127-
*DefaultApi* | [**neurostore_studies_id_get**](docs/DefaultApi.md#neurostore_studies_id_get) | **GET** /neurostore-studies/{id} | Your GET endpoint
128-
*DefaultApi* | [**neurostore_studies_id_put**](docs/DefaultApi.md#neurostore_studies_id_put) | **PUT** /neurostore-studies/{id} |
129-
*DefaultApi* | [**neurostore_studies_post**](docs/DefaultApi.md#neurostore_studies_post) | **POST** /neurostore-studies |
130118
*DefaultApi* | [**studyset_references_get**](docs/DefaultApi.md#studyset_references_get) | **GET** /studyset-references | Your GET endpoint
131119
*DefaultApi* | [**studyset_references_id_get**](docs/DefaultApi.md#studyset_references_id_get) | **GET** /studyset-references/{id} | Your GET endpoint
132120
*GetApi* | [**annotations_get**](docs/GetApi.md#annotations_get) | **GET** /annotations | GET a list of annotations
@@ -135,10 +123,6 @@ Class | Method | HTTP request | Description
135123
*GetApi* | [**meta_analyses_id_get**](docs/GetApi.md#meta_analyses_id_get) | **GET** /meta-analyses/{id} | GET meta-analysis information
136124
*GetApi* | [**meta_analysis_results_get**](docs/GetApi.md#meta_analysis_results_get) | **GET** /meta-analysis-results | Your GET endpoint
137125
*GetApi* | [**meta_analysis_results_id_get**](docs/GetApi.md#meta_analysis_results_id_get) | **GET** /meta-analysis-results/{id} | Your GET endpoint
138-
*GetApi* | [**neurovault_collections_get**](docs/GetApi.md#neurovault_collections_get) | **GET** /neurovault-collections | Get neurovault collections
139-
*GetApi* | [**neurovault_collections_id_get**](docs/GetApi.md#neurovault_collections_id_get) | **GET** /neurovault-collections/{id} | Your GET endpoint
140-
*GetApi* | [**neurovault_files_get**](docs/GetApi.md#neurovault_files_get) | **GET** /neurovault-files | Your GET endpoint
141-
*GetApi* | [**neurovault_files_id_get**](docs/GetApi.md#neurovault_files_id_get) | **GET** /neurovault-files/{id} | Your GET endpoint
142126
*GetApi* | [**projects_get**](docs/GetApi.md#projects_get) | **GET** /projects | Your GET endpoint
143127
*GetApi* | [**projects_id_get**](docs/GetApi.md#projects_id_get) | **GET** /projects/{id} | Your GET endpoint
144128
*GetApi* | [**specifications_get**](docs/GetApi.md#specifications_get) | **GET** /specifications | Get a list of Specifications
@@ -153,19 +137,9 @@ Class | Method | HTTP request | Description
153137
*MetaAnalysesApi* | [**meta_analysis_results_id_get**](docs/MetaAnalysesApi.md#meta_analysis_results_id_get) | **GET** /meta-analysis-results/{id} | Your GET endpoint
154138
*MetaAnalysesApi* | [**meta_analysis_results_id_put**](docs/MetaAnalysesApi.md#meta_analysis_results_id_put) | **PUT** /meta-analysis-results/{id} |
155139
*MetaAnalysesApi* | [**meta_analysis_results_post**](docs/MetaAnalysesApi.md#meta_analysis_results_post) | **POST** /meta-analysis-results |
156-
*NeurovaultApi* | [**neurovault_collections_get**](docs/NeurovaultApi.md#neurovault_collections_get) | **GET** /neurovault-collections | Get neurovault collections
157-
*NeurovaultApi* | [**neurovault_collections_id_get**](docs/NeurovaultApi.md#neurovault_collections_id_get) | **GET** /neurovault-collections/{id} | Your GET endpoint
158-
*NeurovaultApi* | [**neurovault_collections_id_put**](docs/NeurovaultApi.md#neurovault_collections_id_put) | **PUT** /neurovault-collections/{id} |
159-
*NeurovaultApi* | [**neurovault_collections_post**](docs/NeurovaultApi.md#neurovault_collections_post) | **POST** /neurovault-collections | Create neurovault collection
160-
*NeurovaultApi* | [**neurovault_files_get**](docs/NeurovaultApi.md#neurovault_files_get) | **GET** /neurovault-files | Your GET endpoint
161-
*NeurovaultApi* | [**neurovault_files_id_get**](docs/NeurovaultApi.md#neurovault_files_id_get) | **GET** /neurovault-files/{id} | Your GET endpoint
162-
*NeurovaultApi* | [**neurovault_files_id_put**](docs/NeurovaultApi.md#neurovault_files_id_put) | **PUT** /neurovault-files/{id} |
163-
*NeurovaultApi* | [**neurovault_files_post**](docs/NeurovaultApi.md#neurovault_files_post) | **POST** /neurovault-files |
164140
*PostApi* | [**annotations_post**](docs/PostApi.md#annotations_post) | **POST** /annotations | Create a new Annotation
165141
*PostApi* | [**meta_analyses_post**](docs/PostApi.md#meta_analyses_post) | **POST** /meta-analyses | Create a new meta-analysis
166142
*PostApi* | [**meta_analysis_results_post**](docs/PostApi.md#meta_analysis_results_post) | **POST** /meta-analysis-results |
167-
*PostApi* | [**neurovault_collections_post**](docs/PostApi.md#neurovault_collections_post) | **POST** /neurovault-collections | Create neurovault collection
168-
*PostApi* | [**neurovault_files_post**](docs/PostApi.md#neurovault_files_post) | **POST** /neurovault-files |
169143
*PostApi* | [**projects_post**](docs/PostApi.md#projects_post) | **POST** /projects |
170144
*PostApi* | [**specifications_post**](docs/PostApi.md#specifications_post) | **POST** /specifications | Create a Specification
171145
*PostApi* | [**studysets_post**](docs/PostApi.md#studysets_post) | **POST** /studysets | Create a new Studyset
@@ -177,8 +151,6 @@ Class | Method | HTTP request | Description
177151
*PutApi* | [**annotations_id_put**](docs/PutApi.md#annotations_id_put) | **PUT** /annotations/{id} | Update an Annotation
178152
*PutApi* | [**meta_analyses_id_put**](docs/PutApi.md#meta_analyses_id_put) | **PUT** /meta-analyses/{id} | Update a meta-analysis
179153
*PutApi* | [**meta_analysis_results_id_put**](docs/PutApi.md#meta_analysis_results_id_put) | **PUT** /meta-analysis-results/{id} |
180-
*PutApi* | [**neurovault_collections_id_put**](docs/PutApi.md#neurovault_collections_id_put) | **PUT** /neurovault-collections/{id} |
181-
*PutApi* | [**neurovault_files_id_put**](docs/PutApi.md#neurovault_files_id_put) | **PUT** /neurovault-files/{id} |
182154
*PutApi* | [**projects_id_put**](docs/PutApi.md#projects_id_put) | **PUT** /projects/{id} |
183155
*PutApi* | [**specifications_id_put**](docs/PutApi.md#specifications_id_put) | **PUT** /specifications/{id} | Update Meta-Analysis specification
184156
*PutApi* | [**studysets_id_put**](docs/PutApi.md#studysets_id_put) | **PUT** /studysets/{id} | Update a Studyset
@@ -203,7 +175,6 @@ Class | Method | HTTP request | Description
203175
- [AnnotationPostBody](docs/AnnotationPostBody.md)
204176
- [AnnotationReturn](docs/AnnotationReturn.md)
205177
- [AnnotationUpdate](docs/AnnotationUpdate.md)
206-
- [AnnotationUpdateAllOf](docs/AnnotationUpdateAllOf.md)
207178
- [Corrector](docs/Corrector.md)
208179
- [Estimator](docs/Estimator.md)
209180
- [MetaAnalysesGet400Response](docs/MetaAnalysesGet400Response.md)

docs/Annotation.md

Lines changed: 3 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -3,6 +3,7 @@
33
a holder/reference to the annotation on neurostore
44

55
## Properties
6+
67
Name | Type | Description | Notes
78
------------ | ------------- | ------------- | -------------
89
**neurostore_id** | **str** | the id of the annotation on neurostore | [optional]
@@ -20,12 +21,12 @@ json = "{}"
2021
# create an instance of Annotation from a JSON string
2122
annotation_instance = Annotation.from_json(json)
2223
# print the JSON string representation of the object
23-
print Annotation.to_json()
24+
print(Annotation.to_json())
2425

2526
# convert the object into a dict
2627
annotation_dict = annotation_instance.to_dict()
2728
# create an instance of Annotation from a dict
28-
annotation_form_dict = annotation.from_dict(annotation_dict)
29+
annotation_from_dict = Annotation.from_dict(annotation_dict)
2930
```
3031
[[Back to Model list]](../README.md#documentation-for-models) [[Back to API list]](../README.md#documentation-for-api-endpoints) [[Back to README]](../README.md)
3132

docs/AnnotationList.md

Lines changed: 3 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -2,6 +2,7 @@
22

33

44
## Properties
5+
56
Name | Type | Description | Notes
67
------------ | ------------- | ------------- | -------------
78
**results** | [**List[AnnotationReturn]**](AnnotationReturn.md) | | [optional]
@@ -17,12 +18,12 @@ json = "{}"
1718
# create an instance of AnnotationList from a JSON string
1819
annotation_list_instance = AnnotationList.from_json(json)
1920
# print the JSON string representation of the object
20-
print AnnotationList.to_json()
21+
print(AnnotationList.to_json())
2122

2223
# convert the object into a dict
2324
annotation_list_dict = annotation_list_instance.to_dict()
2425
# create an instance of AnnotationList from a dict
25-
annotation_list_form_dict = annotation_list.from_dict(annotation_list_dict)
26+
annotation_list_from_dict = AnnotationList.from_dict(annotation_list_dict)
2627
```
2728
[[Back to Model list]](../README.md#documentation-for-models) [[Back to API list]](../README.md#documentation-for-api-endpoints) [[Back to README]](../README.md)
2829

docs/AnnotationPostBody.md

Lines changed: 3 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -2,6 +2,7 @@
22

33

44
## Properties
5+
56
Name | Type | Description | Notes
67
------------ | ------------- | ------------- | -------------
78
**cached_studyset_id** | **str** | |
@@ -20,12 +21,12 @@ json = "{}"
2021
# create an instance of AnnotationPostBody from a JSON string
2122
annotation_post_body_instance = AnnotationPostBody.from_json(json)
2223
# print the JSON string representation of the object
23-
print AnnotationPostBody.to_json()
24+
print(AnnotationPostBody.to_json())
2425

2526
# convert the object into a dict
2627
annotation_post_body_dict = annotation_post_body_instance.to_dict()
2728
# create an instance of AnnotationPostBody from a dict
28-
annotation_post_body_form_dict = annotation_post_body.from_dict(annotation_post_body_dict)
29+
annotation_post_body_from_dict = AnnotationPostBody.from_dict(annotation_post_body_dict)
2930
```
3031
[[Back to Model list]](../README.md#documentation-for-models) [[Back to API list]](../README.md#documentation-for-api-endpoints) [[Back to README]](../README.md)
3132

docs/AnnotationReturn.md

Lines changed: 3 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -2,6 +2,7 @@
22

33

44
## Properties
5+
56
Name | Type | Description | Notes
67
------------ | ------------- | ------------- | -------------
78
**neurostore_id** | **str** | the id of the annotation on neurostore | [optional]
@@ -24,12 +25,12 @@ json = "{}"
2425
# create an instance of AnnotationReturn from a JSON string
2526
annotation_return_instance = AnnotationReturn.from_json(json)
2627
# print the JSON string representation of the object
27-
print AnnotationReturn.to_json()
28+
print(AnnotationReturn.to_json())
2829

2930
# convert the object into a dict
3031
annotation_return_dict = annotation_return_instance.to_dict()
3132
# create an instance of AnnotationReturn from a dict
32-
annotation_return_form_dict = annotation_return.from_dict(annotation_return_dict)
33+
annotation_return_from_dict = AnnotationReturn.from_dict(annotation_return_dict)
3334
```
3435
[[Back to Model list]](../README.md#documentation-for-models) [[Back to API list]](../README.md#documentation-for-api-endpoints) [[Back to README]](../README.md)
3536

0 commit comments

Comments
 (0)