add _pasa to db names #398

Author: Jon Palmer

funannotate/train.py

@@ -391,6 +391,7 @@ def runPASAtrain(genome, transcripts, cleaned_transcripts, gff3_alignments,
     alignConfig = os.path.join(folder, 'alignAssembly.txt')
     pasaDBname = dbname.replace('-', '_')
     pasaDBname = dbname.replace('.', '_')
+    pasaDBname += '_pasa'
     if pasa_db == 'sqlite':
         pasaDBname_path = os.path.abspath(os.path.join(folder, pasaDBname))
     else:

funannotate/update.py

@@ -542,6 +542,7 @@ def runPASA(genome, transcripts, cleanTranscripts, gff3_alignments,
     # check if config file is passed, if so, get databasename and copy to assembly config file
     # dashes will get stripped in MySQL
     DataBaseName = dbname.replace('-', '_')
+    DataBaseName += '_pasa'
     if pasa_db == 'sqlite':
         DataBaseName = os.path.abspath(os.path.join(folder, DataBaseName))
     if configFile: