updates to v0.3.4

Author: Jon Palmer

README.md

@@ -1,6 +1,6 @@
 # funannotate
 
-funannotate is a pipeline for genome annotation (built specifically for fungi, but could work with other eukaryotes).  Genome annotation is a complicated process that uses software from many sources, thus the hardest part about using funannotate will be getting all of the dependencies installed.  After that, funannotate requires only a few simple commands to go from genome assembly all the way to a functional annotated genome (InterPro, PFAM, MEROPS, CAZymes, GO ontology, etc) that is ready for submission to NCBI.  Moreover, funannotate incorporates a light-weight comparative genomics package that can get you started looking at differences between fungal genomes.
+funannotate is a pipeline for genome annotation (built specifically for fungi, but theoretically should work with other eukaryotes).  Genome annotation is a complicated process that uses software from many sources, thus the hardest part about using funannotate will be getting all of the dependencies installed.  After that, funannotate requires only a few simple commands to go from genome assembly all the way to a functional annotated genome (InterPro, PFAM, MEROPS, CAZymes, GO ontology, etc) that is ready for submission to NCBI.  Moreover, funannotate incorporates a light-weight comparative genomics package that can get you started looking at differences between funannotated genomes.
 
 ###Installation
 
@@ -32,7 +32,7 @@ To see the help menu, simply type `funannotate` in the terminal window.  Similar
 $  funannotate
 
 Usage:       funannotate <command> <arguments>
-version:     0.3.2
+version:     0.3.4
 
 Description: Funannotate is a genome prediction, annotation, and comparison pipeline.