from #16 (comment)
The workflow has been updated to work with Pathoplexus data, however the ids in the include/exclude files were not updated accordingly.
|
EM_074335 # lack country metadata |
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EM_074462 # lack country metadata |
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G5364.1 # overly divergent |
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G4837.1 # overly divergent |
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LIBR10201 # overly divergent |
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MK0868 # overly divergent |
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PL7375 # overly divergent |
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EM_076610 # flare-up index case |
from #16 (comment)
The workflow has been updated to work with Pathoplexus data, however the ids in the include/exclude files were not updated accordingly.
ebola/phylogenetic/defaults/exclude.txt
Lines 1 to 7 in 0dee7a3
ebola/phylogenetic/defaults/west-africa-2014/include.txt
Line 1 in 0dee7a3