Current Behavior
The website currently states for clade frequencies:
Only locations with more than 100 sequences from samples collected in the previous 150 days are included.
We show the following countries:
- Australia
- Belgium
- Canada
- China
- Denmark
- Finland
- France
- Germany
- Iceland
- Ireland
- Italy
- Japan
- Netherlands
- Singapore
- South Korea
- Spain
- Switzerland
- Sweden
- USA
- UK
This doesn't seem to be correct, or at least missing important context, as when I look for countries with more than 100 sequences with collection date <150 days ago on covSpectrum (https://cov-spectrum.org/explore/World/AllSamples/from%3D2023-07-02%26to%3D2023-11-22/variants/international-comparison?&) I get the following countries:
| Country |
Total Variant Sequences |
First seq. found at |
Last seq. found at |
| United States |
99114 |
2023-26 |
2023-47 |
| Canada |
33981 |
2023-26 |
2023-46 |
| United Kingdom |
22897 |
2023-26 |
2023-46 |
| Japan |
22771 |
2023-26 |
2023-45 |
| South Korea |
18858 |
2023-26 |
2023-45 |
| France |
17394 |
2023-26 |
2023-46 |
| Spain |
14246 |
2023-26 |
2023-46 |
| China |
13271 |
2023-26 |
2023-46 |
| Australia |
7386 |
2023-26 |
2023-46 |
| Sweden |
6758 |
2023-26 |
2023-47 |
| Italy |
5333 |
2023-26 |
2023-47 |
| Denmark |
4696 |
2023-27 |
2023-46 |
| Singapore |
4517 |
2023-26 |
2023-44 |
| Germany |
3514 |
2023-26 |
2023-46 |
| Netherlands |
3139 |
2023-26 |
2023-46 |
| Belgium |
3077 |
2023-26 |
2023-47 |
| Brazil |
2781 |
2023-26 |
2023-45 |
| New Zealand |
2668 |
2023-26 |
2023-43 |
| Israel |
2617 |
2023-26 |
2023-45 |
| Greece |
2469 |
2023-27 |
2023-40 |
| Ireland |
2343 |
2023-26 |
2023-47 |
| Russia |
1963 |
2023-26 |
2023-44 |
| Switzerland |
1916 |
2023-27 |
2023-46 |
| Finland |
1668 |
2023-26 |
2023-45 |
| Austria |
1411 |
2023-27 |
2023-46 |
| Peru |
1254 |
2023-26 |
2023-43 |
| Luxembourg |
1213 |
2023-27 |
2023-43 |
| Portugal |
1198 |
2023-27 |
2023-45 |
| Mexico |
1074 |
2023-26 |
2023-42 |
| Croatia |
858 |
2023-27 |
2023-43 |
| Chile |
787 |
2023-27 |
2023-43 |
| Thailand |
773 |
2023-26 |
2023-43 |
| Slovenia |
752 |
2023-26 |
2023-42 |
| Iceland |
676 |
2023-27 |
2023-46 |
| Colombia |
653 |
2023-26 |
2023-43 |
| Ukraine |
652 |
2023-27 |
2023-44 |
| Taiwan |
581 |
2023-26 |
2023-45 |
| South Africa |
493 |
2023-27 |
2023-41 |
| Turkey |
465 |
2023-28 |
2023-40 |
| Poland |
459 |
2023-28 |
2023-45 |
| Norway |
441 |
2023-26 |
2023-44 |
| Romania |
364 |
2023-27 |
2023-40 |
| Argentina |
359 |
2023-26 |
2023-38 |
| Malaysia |
359 |
2023-26 |
2023-43 |
| Costa Rica |
341 |
2023-26 |
2023-43 |
| Guatemala |
321 |
2023-27 |
2023-40 |
| India |
285 |
2023-26 |
2023-44 |
| Georgia |
272 |
2023-27 |
2023-40 |
| Mauritius |
270 |
2023-27 |
2023-44 |
| Bulgaria |
254 |
2023-27 |
2023-43 |
| Dominican Republic |
200 |
2023-27 |
2023-35 |
Expected behavior
Brazil | 2781 | 2023-26 | 2023-45
New Zealand | 2668 | 2023-26 | 2023-43
Israel | 2617 | 2023-26 | 2023-45
Greece | 2469 | 2023-27 | 2023-40
Russia | 1963 | 2023-26 | 2023-44
Austria | 1411 | 2023-27 | 2023-46
Peru | 1254 | 2023-26 | 2023-43
Luxembourg | 1213 | 2023-27 | 2023-43
Portugal | 1198 | 2023-27 | 2023-45
Mexico | 1074 | 2023-26 | 2023-42
Croatia | 858 | 2023-27 | 2023-43
Chile | 787 | 2023-27 | 2023-43
Thailand | 773 | 2023-26 | 2023-43
Slovenia | 752 | 2023-26 | 2023-42
Colombia | 653 | 2023-26 | 2023-43
Ukraine | 652 | 2023-27 | 2023-44
Taiwan | 581 | 2023-26 | 2023-45
South Africa | 493 | 2023-27 | 2023-41
Turkey | 465 | 2023-28 | 2023-40
Poland | 459 | 2023-28 | 2023-45
Norway | 441 | 2023-26 | 2023-44
Romania | 364 | 2023-27 | 2023-40
Argentina | 359 | 2023-26 | 2023-38
Malaysia | 359 | 2023-26 | 2023-43
Costa Rica | 341 | 2023-26 | 2023-43
Guatemala | 321 | 2023-27 | 2023-40
India | 285 | 2023-26 | 2023-44
Georgia | 272 | 2023-27 | 2023-40
Mauritius | 270 | 2023-27 | 2023-44
Bulgaria | 254 | 2023-27 | 2023-43
Dominican Republic | 200 | 2023-27 | 2023-35
Notably, we include Iceland with only 700 sequences but exclude Brazil with 2500
Current Behavior
The website currently states for clade frequencies:
We show the following countries:
This doesn't seem to be correct, or at least missing important context, as when I look for countries with more than 100 sequences with collection date <150 days ago on covSpectrum (https://cov-spectrum.org/explore/World/AllSamples/from%3D2023-07-02%26to%3D2023-11-22/variants/international-comparison?&) I get the following countries:
Expected behavior
Brazil | 2781 | 2023-26 | 2023-45
New Zealand | 2668 | 2023-26 | 2023-43
Israel | 2617 | 2023-26 | 2023-45
Greece | 2469 | 2023-27 | 2023-40
Russia | 1963 | 2023-26 | 2023-44
Austria | 1411 | 2023-27 | 2023-46
Peru | 1254 | 2023-26 | 2023-43
Luxembourg | 1213 | 2023-27 | 2023-43
Portugal | 1198 | 2023-27 | 2023-45
Mexico | 1074 | 2023-26 | 2023-42
Croatia | 858 | 2023-27 | 2023-43
Chile | 787 | 2023-27 | 2023-43
Thailand | 773 | 2023-26 | 2023-43
Slovenia | 752 | 2023-26 | 2023-42
Colombia | 653 | 2023-26 | 2023-43
Ukraine | 652 | 2023-27 | 2023-44
Taiwan | 581 | 2023-26 | 2023-45
South Africa | 493 | 2023-27 | 2023-41
Turkey | 465 | 2023-28 | 2023-40
Poland | 459 | 2023-28 | 2023-45
Norway | 441 | 2023-26 | 2023-44
Romania | 364 | 2023-27 | 2023-40
Argentina | 359 | 2023-26 | 2023-38
Malaysia | 359 | 2023-26 | 2023-43
Costa Rica | 341 | 2023-26 | 2023-43
Guatemala | 321 | 2023-27 | 2023-40
India | 285 | 2023-26 | 2023-44
Georgia | 272 | 2023-27 | 2023-40
Mauritius | 270 | 2023-27 | 2023-44
Bulgaria | 254 | 2023-27 | 2023-43
Dominican Republic | 200 | 2023-27 | 2023-35
Notably, we include Iceland with only 700 sequences but exclude Brazil with 2500