[GitHub search](https://github.com/search?q=org%3Anextstrain+%28%22nextclade2+run%22+OR+%22nextalign+run%22%29+%28NOT+repo%3Anextstrain%2Fnextclade%29+%28path%3A**.smk+OR+path%3A**Snakefile%29&type=code) for `nextclade2` as part of https://github.com/nextstrain/private/issues/97 led me to finding https://github.com/nextstrain/rabies/blob/01f492a24d1d289ae68e7775472a4d31cf697a01/nextclade/build-configs/test-dataset/test_dataset.smk#L15 If we don't have concrete plans to create a Nextclade dataset for rabies, we should just remove the top level nextclade directory.
GitHub search for
nextclade2as part of https://github.com/nextstrain/private/issues/97 led me to findingrabies/nextclade/build-configs/test-dataset/test_dataset.smk
Line 15 in 01f492a
If we don't have concrete plans to create a Nextclade dataset for rabies, we should just remove the top level nextclade directory.