Skip to content

Add gfastats module (structural assembly statistics) #209

@Daniel-VM

Description

@Daniel-VM

Description of feature

Description

Add a module for gfastats, a tool that parses assembly FASTA/GFA files and produces detailed metrics, including circularity status, which is helpful in bacterial genome projects.

Goal

  • Build a module that runs gfastats on FASTA files
  • Report standard metrics (N50, circularity, etc.) and check whether output stats can be added to MultiQC
  • Include documentation

Metadata

Metadata

Assignees

No one assigned

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions