Add dnapler module (genome rotation to dnaA)

### Description of feature

## Description
Implement a module for [dnaapler](https://github.com/kblin/dnaapler), a tool for rotating circular bacterial genomes to start at the dnaA gene. It’s a simpler alternative to Circlator, ideal for polishing workflows.

## Goal

- Build a new module that runs dnaapler with a FASTA input
- Add test data and unit tests
- Provide documentation